Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:32:17 (27350): wrapper (7.7.26015): starting
21:32:17 (27350): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 21:32:17] Arguments: --nthreads 8
[2025-12-02 21:32:17] Threads: 8
[2025-12-02 21:32:17] Checking for CVMFS
[2025-12-02 21:32:18] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 21:32:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 21:32:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 21:32:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 21:32:20] 2.11.2.0 11529 231655 140588 153568 2 84 17827417 25165824 2504 130560 9 96300910 99.892 43209183 2395 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-02 21:32:20] CVMFS is ok
[2025-12-02 21:32:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 21:32:20] Checking for apptainer binary...
[2025-12-02 21:32:20] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 21:32:20] Running /usr/bin/apptainer --version
[2025-12-02 21:32:20] apptainer version 1.3.2-1.el7
[2025-12-02 21:32:20] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 21:32:34] cg-vwn354.simple-grid.lan
[2025-12-02 21:32:34] apptainer works
[2025-12-02 21:32:34] Set ATHENA_PROC_NUMBER=8
[2025-12-02 21:32:34] Set ATHENA_CORE_NUMBER=8
[2025-12-02 21:32:34] Starting ATLAS job with PandaID=6905025671
[2025-12-02 21:32:34] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 08:30:15]  *** The last 200 lines of the pilot log: ***
[2025-12-03 08:30:15] 2025-12-03 07:29:23,259 | INFO     | extracted standard info from prmon json
[2025-12-03 08:30:15] 2025-12-03 07:29:23,259 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 08:30:15] 2025-12-03 07:29:23,259 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 08:30:15] 2025-12-03 07:29:23,259 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-03 08:30:15] 2025-12-03 07:29:23,259 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-03 08:30:15] 2025-12-03 07:29:23,271 | INFO     | fitting pss+swap vs Time
[2025-12-03 08:30:15] 2025-12-03 07:29:23,272 | INFO     | sum of square deviations: 79395981670.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,284 | INFO     | sum of deviations: 246557163675.99994
[2025-12-03 08:30:15] 2025-12-03 07:29:23,284 | INFO     | mean x: 1764727576.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,284 | INFO     | mean y: 2535321.9968503937
[2025-12-03 08:30:15] 2025-12-03 07:29:23,284 | INFO     | intersect: -5477669301.051331
[2025-12-03 08:30:15] 2025-12-03 07:29:23,285 | INFO     | chi2: 5.1589615066551096
[2025-12-03 08:30:15] 2025-12-03 07:29:23,286 | INFO     | sum of square deviations: 77535211897.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,297 | INFO     | sum of deviations: 287068190388.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,298 | INFO     | mean x: 1764727423.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,298 | INFO     | mean y: 2538619.434920635
[2025-12-03 08:30:15] 2025-12-03 07:29:23,298 | INFO     | intersect: -6531229659.446344
[2025-12-03 08:30:15] 2025-12-03 07:29:23,299 | INFO     | chi2: 4.397149805295477
[2025-12-03 08:30:15] 2025-12-03 07:29:23,299 | INFO     | current chi2=4.397149805295477 (change=14.766764597426981 %)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,299 | INFO     | right removable region: 629
[2025-12-03 08:30:15] 2025-12-03 07:29:23,300 | INFO     | sum of square deviations: 77535211897.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,311 | INFO     | sum of deviations: 36933604821.50001
[2025-12-03 08:30:15] 2025-12-03 07:29:23,312 | INFO     | mean x: 1764727728.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,312 | INFO     | mean y: 2552489.6714285715
[2025-12-03 08:30:15] 2025-12-03 07:29:23,312 | INFO     | intersect: -838068886.6927199
[2025-12-03 08:30:15] 2025-12-03 07:29:23,313 | INFO     | chi2: 1.3209078522734112
[2025-12-03 08:30:15] 2025-12-03 07:29:23,313 | INFO     | current chi2=1.3209078522734112 (change=74.39585756611234 %)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,314 | INFO     | sum of square deviations: 75703745000.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,324 | INFO     | sum of deviations: -17381305412.999996
[2025-12-03 08:30:15] 2025-12-03 07:29:23,324 | INFO     | mean x: 1764727881.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,325 | INFO     | mean y: 2556997.256
[2025-12-03 08:30:15] 2025-12-03 07:29:23,325 | INFO     | intersect: 407732121.29375154
[2025-12-03 08:30:15] 2025-12-03 07:29:23,325 | INFO     | chi2: 0.9095406511981727
[2025-12-03 08:30:15] 2025-12-03 07:29:23,326 | INFO     | current chi2=0.9095406511981727 (change=31.14276293893139 %)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,327 | INFO     | sum of square deviations: 73901348415.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,337 | INFO     | sum of deviations: -29676951064.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,338 | INFO     | mean x: 1764728033.5
[2025-12-03 08:30:15] 2025-12-03 07:29:23,338 | INFO     | mean y: 2558037.520967742
[2025-12-03 08:30:15] 2025-12-03 07:29:23,338 | INFO     | intersect: 711229105.3103174
[2025-12-03 08:30:15] 2025-12-03 07:29:23,339 | INFO     | chi2: 0.8965006197550832
[2025-12-03 08:30:15] 2025-12-03 07:29:23,339 | INFO     | current chi2=0.8965006197550832 (change=1.4336941868306143 %)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,339 | INFO     | left removable region: 30
[2025-12-03 08:30:15] 2025-12-03 07:29:23,340 | INFO     | sum of square deviations: 66643482100.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,350 | INFO     | sum of deviations: 60821286653.000015
[2025-12-03 08:30:15] 2025-12-03 07:29:23,350 | INFO     | mean x: 1764728308.0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,350 | INFO     | mean y: 2557209.884808013
[2025-12-03 08:30:15] 2025-12-03 07:29:23,350 | INFO     | intersect: -1607998584.9711108
[2025-12-03 08:30:15] 2025-12-03 07:29:23,351 | INFO     | chi2: 0.01931029086579452
[2025-12-03 08:30:15] 2025-12-03 07:29:23,351 | INFO     | current memory leak: 0.91 B/s (using 599 data points, chi2=0.02)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,352 | INFO     | could have reported an average CPU frequency of 1999 MHz (24 samples)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | ..............................
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | . Timing measurements:
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | . get job = 0 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | . initial setup = 6 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | . payload setup = 129 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,353 | INFO     | . stage-in = 0 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,354 | INFO     | . payload execution = 38873 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,354 | INFO     | . stage-out = 1 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,354 | INFO     | . log creation = 0 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,354 | INFO     | ..............................
[2025-12-03 08:30:15] 2025-12-03 07:29:23,781 | INFO     | PID=31188 has CPU usage=9.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,782 | INFO     | .. there are 8 such processes running
[2025-12-03 08:30:15] 2025-12-03 07:29:23,839 | INFO     | 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | job summary report
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | --------------------------------------------------
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | PanDA job id: 6905025671
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | task id: 47523969
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | errors: (none)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | pilot state: finished 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | transexitcode: 0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,840 | INFO     | exeerrorcode: 0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | exeerrordiag: 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | exitcode: 0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | exitmsg: OK
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | cpuconsumptiontime: 150419 s
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | nevents: 400
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | neventsw: 0
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | pid: 5312
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | pgrp: 5312
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | corecount: 8
[2025-12-03 08:30:15] 2025-12-03 07:29:23,841 | INFO     | event service: False
[2025-12-03 08:30:15] 2025-12-03 07:29:23,842 | INFO     | sizes: {0: 2283063, 1: 2283748, 2: 2283947, 13: 2283947, 23: 2284003, 34: 2284031, 45: 2284187, 56: 2284215, 66: 2284243, 77: 2284271, 88: 2284327, 97: 2284897, 99
[2025-12-03 08:30:15] 2025-12-03 07:29:23,842 | INFO     | --------------------------------------------------
[2025-12-03 08:30:15] 2025-12-03 07:29:23,842 | INFO     | 
[2025-12-03 08:30:15] 2025-12-03 07:29:23,842 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-03 08:30:15] 2025-12-03 07:29:23,892 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,893 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,894 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 08:30:15] 2025-12-03 07:29:23,895 | INFO     | job 6905025671 has completed (purged errors)
[2025-12-03 08:30:15] 2025-12-03 07:29:23,895 | INFO     | overall cleanup function is called
[2025-12-03 08:30:15] 2025-12-03 07:29:24,902 | INFO     | --- collectZombieJob: --- 10, [5312]
[2025-12-03 08:30:15] 2025-12-03 07:29:24,903 | INFO     | zombie collector waiting for pid 5312
[2025-12-03 08:30:15] 2025-12-03 07:29:24,903 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 08:30:15] 2025-12-03 07:29:24,903 | INFO     | collected zombie processes
[2025-12-03 08:30:15] 2025-12-03 07:29:24,903 | INFO     | will attempt to kill all subprocesses of pid=5312
[2025-12-03 08:30:15] 2025-12-03 07:29:24,993 | INFO     | process IDs to be killed: [5312] (in reverse order)
[2025-12-03 08:30:15] 2025-12-03 07:29:25,058 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 08:30:15] 2025-12-03 07:29:25,058 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 08:30:15] 2025-12-03 07:29:25,062 | INFO     | did not find any defunct processes belonging to 5312
[2025-12-03 08:30:15] 2025-12-03 07:29:25,065 | INFO     | did not find any defunct processes belonging to 5312
[2025-12-03 08:30:15] 2025-12-03 07:29:25,067 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 08:30:15] 2025-12-03 07:29:25,067 | INFO     | ready for new job
[2025-12-03 08:30:15] 2025-12-03 07:29:25,067 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 08:30:15] 2025-12-03 07:29:25,070 | INFO     | ***************************************
[2025-12-03 08:30:15] 2025-12-03 07:29:25,070 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 08:30:15] 2025-12-03 07:29:25,070 | INFO     | ***************************************
[2025-12-03 08:30:15] 2025-12-03 07:29:25,070 | INFO     | 
[2025-12-03 08:30:15] 2025-12-03 07:29:25,071 | INFO     | pilot is running in a VM
[2025-12-03 08:30:15] 2025-12-03 07:29:25,071 | INFO     | architecture information:
[2025-12-03 08:30:15] 2025-12-03 07:29:25,071 | INFO     | executing command: cat /etc/os-release
[2025-12-03 08:30:15] 2025-12-03 07:29:25,089 | INFO     | cat /etc/os-release:
[2025-12-03 08:30:15] NAME="CentOS Linux"
[2025-12-03 08:30:15] VERSION="7 (Core)"
[2025-12-03 08:30:15] ID="centos"
[2025-12-03 08:30:15] ID_LIKE="rhel fedora"
[2025-12-03 08:30:15] VERSION_ID="7"
[2025-12-03 08:30:15] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 08:30:15] ANSI_COLOR="0;31"
[2025-12-03 08:30:15] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 08:30:15] HOME_URL="https://www.centos.org/"
[2025-12-03 08:30:15] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 08:30:15] 
[2025-12-03 08:30:15] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 08:30:15] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 08:30:15] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 08:30:15] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 08:30:15] 
[2025-12-03 08:30:15] 2025-12-03 07:29:25,089 | INFO     | ***************************************
[2025-12-03 08:30:15] 2025-12-03 07:29:25,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-03 08:30:15] 2025-12-03 07:29:25,616 | INFO     | sufficient remaining disk space (495429091328 B)
[2025-12-03 08:30:15] 2025-12-03 07:29:25,617 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 08:30:15] 2025-12-03 07:29:25,617 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 08:30:15] 2025-12-03 07:29:25,617 | INFO     | update_server=False
[2025-12-03 08:30:15] 2025-12-03 07:29:25,617 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 08:30:15] 2025-12-03 07:29:25,617 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:30:15] 2025-12-03 07:29:25,618 | INFO     | aborting loop
[2025-12-03 08:30:15] 2025-12-03 07:29:25,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 08:30:15] 2025-12-03 07:29:25,642 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 08:30:15] 2025-12-03 07:29:26,311 | INFO     | all data control threads have been joined
[2025-12-03 08:30:15] 2025-12-03 07:29:26,340 | INFO     | all job control threads have been joined
[2025-12-03 08:30:15] 2025-12-03 07:29:26,541 | INFO     | all payload control threads have been joined
[2025-12-03 08:30:15] 2025-12-03 07:29:26,622 | INFO     | [job] job monitor thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:26,623 | INFO     | [job] retrieve thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:26,687 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:26,992 | INFO     | [payload] validate_post thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,210 | INFO     | [job] validate thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,317 | INFO     | [data] control thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,346 | INFO     | [job] control thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,359 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,422 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,547 | INFO     | [payload] control thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,625 | INFO     | [data] copytool_out thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:27,673 | INFO     | [data] copytool_in thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:28,074 | INFO     | [payload] failed_post thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:28,475 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 08:30:15] 2025-12-03 07:29:29,480 | INFO     | [job] queue monitor thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:29,651 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:35,674 | INFO     | job.realtimelogging is not enabled
[2025-12-03 08:30:15] 2025-12-03 07:29:36,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 08:30:15] 2025-12-03 07:29:55,996 | INFO     | PID=31188 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 08:30:15] 2025-12-03 07:29:55,996 | INFO     | .. there are 8 such processes running
[2025-12-03 08:30:15] 2025-12-03 07:29:55,996 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 08:30:15] 2025-12-03 07:29:55,996 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 08:30:15] 2025-12-03 07:29:55,997 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 08:30:15] 2025-12-03 07:30:08,814 | INFO     | [monitor] cgroup control has ended
[2025-12-03 08:30:15] 2025-12-03 07:30:10,114 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140623133751104)>', '<ExcThread(monitor, started 140622824449792)>']
[2025-12-03 08:30:15] 2025-12-03 07:30:11,079 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 08:30:15] 2025-12-03 07:30:11,080 | INFO     | [monitor] control thread has ended
[2025-12-03 08:30:15] 2025-12-03 07:30:15,140 | INFO     | all workflow threads have been joined
[2025-12-03 08:30:15] 2025-12-03 07:30:15,140 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 08:30:15] 2025-12-03 07:30:15,140 | INFO     | traces error code: 0
[2025-12-03 08:30:15] 2025-12-03 07:30:15,141 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 08:30:15] 2025-12-03 07:30:15,347 [wrapper] ==== pilot stdout END ====
[2025-12-03 08:30:15] 2025-12-03 07:30:15,353 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 08:30:15] 2025-12-03 07:30:15,358 [wrapper] pilotpid: 31188
[2025-12-03 08:30:15] 2025-12-03 07:30:15,410 [wrapper] Pilot exit status: 0
[2025-12-03 08:30:15] 2025-12-03 07:30:15,488 [wrapper] pandaids: 6905025671
[2025-12-03 08:30:15] 2025-12-03 07:30:15,587 [wrapper] cleanup supervisor_pilot 30901 31189
[2025-12-03 08:30:15] 2025-12-03 07:30:15,609 [wrapper] Test setup, not cleaning
[2025-12-03 08:30:15] 2025-12-03 07:30:15,616 [wrapper] apfmon messages muted
[2025-12-03 08:30:15] 2025-12-03 07:30:15,637 [wrapper] ==== wrapper stdout END ====
[2025-12-03 08:30:15] 2025-12-03 07:30:15,654 [wrapper] ==== wrapper stderr END ====
[2025-12-03 08:30:15]  *** Error codes and diagnostics ***
[2025-12-03 08:30:15]     "exeErrorCode": 0,
[2025-12-03 08:30:15]     "exeErrorDiag": "",
[2025-12-03 08:30:15]     "pilotErrorCode": 0,
[2025-12-03 08:30:15]     "pilotErrorDiag": "",
[2025-12-03 08:30:15]  *** Listing of results directory ***
[2025-12-03 08:30:15] total 631676
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc    576529 Nov 30 01:16 pilot3.tar.gz
[2025-12-03 08:30:15] -rwx------. 1 boinc boinc     36292 Nov 30 01:17 runpilot2-wrapper.sh
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc      5112 Nov 30 01:17 queuedata.json
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc       100 Dec  2 21:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 08:30:15] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 21:32 run_atlas
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc       105 Dec  2 21:32 job.xml
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc      6393 Dec  2 21:32 init_data.xml
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc 296750262 Dec  2 21:32 EVNT.47523965._000007.pool.root.1
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc     15847 Dec  2 21:32 start_atlas.sh
[2025-12-03 08:30:15] drwxrwx--x. 2 boinc boinc        68 Dec  2 21:32 shared
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc    589952 Dec  2 21:32 input.tar.gz
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc         0 Dec  2 21:32 boinc_lockfile
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc      2604 Dec  2 21:32 pandaJob.out
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc    989224 Dec  2 21:35 agis_schedconf.cvmfs.json
[2025-12-03 08:30:15] drwx------. 5 boinc boinc      4096 Dec  2 21:36 pilot3
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc 334275796 Dec  3 08:28 HITS.47523969._000130.pool.root.1
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc       532 Dec  3 08:28 boinc_task_state.xml
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc        95 Dec  3 08:28 pilot_heartbeat.json
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc      1033 Dec  3 08:29 memory_monitor_summary.json
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc   1516240 Dec  3 08:29 agis_ddmendpoints.agis.ALL.json
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc    777907 Dec  3 08:29 log.47523969._000130.job.log.tgz.1
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc      7774 Dec  3 08:29 heartbeat.json
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc      8192 Dec  3 08:29 boinc_mmap_file
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc        29 Dec  3 08:29 wrapper_checkpoint.txt
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc      4956 Dec  3 08:30 pilotlog.txt
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc   5178631 Dec  3 08:30 log.47523969._000130.job.log.1
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc       357 Dec  3 08:30 output.list
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc       620 Dec  3 08:30 runtime_log
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc   5980160 Dec  3 08:30 result.tar.gz
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc       659 Dec  3 08:30 u7ONDmdJkj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPFPKDmVd8JUm.diag
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc      8817 Dec  3 08:30 runtime_log.err
[2025-12-03 08:30:15] -rw-r--r--. 1 boinc boinc     20906 Dec  3 08:30 stderr.txt
[2025-12-03 08:30:15] HITS file was successfully produced:
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc 334275796 Dec  3 08:28 shared/HITS.pool.root.1
[2025-12-03 08:30:15]  *** Contents of shared directory: ***
[2025-12-03 08:30:15] total 622676
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc 296750262 Dec  2 21:32 ATLAS.root_0
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc     15847 Dec  2 21:32 start_atlas.sh
[2025-12-03 08:30:15] -rw-r--r--. 2 boinc boinc    589952 Dec  2 21:32 input.tar.gz
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc 334275796 Dec  3 08:28 HITS.pool.root.1
[2025-12-03 08:30:15] -rw-------. 1 boinc boinc   5980160 Dec  3 08:30 result.tar.gz
08:30:17 (27350): run_atlas exited; CPU time 150946.559339
08:30:17 (27350): called boinc_finish(0)

</stderr_txt>
]]>

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