Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
18:55:23 (3158468): wrapper (7.7.26015): starting
18:55:23 (3158468): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 18:55:23] Arguments: --nthreads 8
[2025-11-30 18:55:23] Threads: 8
[2025-11-30 18:55:23] Checking for CVMFS
[2025-11-30 18:55:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 18:55:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 18:55:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 18:55:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 18:55:24] 2.13.2.0 5678 39349 174748 153498 0 91 37645848 39288832 8344 16776704 0 32683148 99.783 21178289 37937 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 18:55:24] CVMFS is ok
[2025-11-30 18:55:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 18:55:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 18:55:24] Further information can be found at the LHC@home message board.
[2025-11-30 18:55:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 18:55:24] Checking for apptainer binary...
[2025-11-30 18:55:24] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 18:55:24] Running /usr/bin/apptainer --version
[2025-11-30 18:55:24] apptainer version 1.4.4-1.el9
[2025-11-30 18:55:24] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 18:55:25] c-210-21.aglt2.org
[2025-11-30 18:55:25] apptainer works
[2025-11-30 18:55:25] Set ATHENA_PROC_NUMBER=8
[2025-11-30 18:55:25] Set ATHENA_CORE_NUMBER=8
[2025-11-30 18:55:25] Starting ATLAS job with PandaID=6897928633
[2025-11-30 18:55:25] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 12:22:11]  *** The last 200 lines of the pilot log: ***
[2025-12-01 12:22:11] 2025-12-01 14:27:49,829 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 12:22:11] 2025-12-01 14:27:49,829 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 12:22:11] 2025-12-01 14:27:49,846 | INFO     | fitting pss+swap vs Time
[2025-12-01 12:22:11] 2025-12-01 14:27:49,847 | INFO     | sum of square deviations: 195070750202.87286
[2025-12-01 12:22:11] 2025-12-01 14:27:49,866 | INFO     | sum of deviations: 1693601511349.197
[2025-12-01 12:22:11] 2025-12-01 14:27:49,867 | INFO     | mean x: 1764573105.2648776
[2025-12-01 12:22:11] 2025-12-01 14:27:49,867 | INFO     | mean y: 3520339.4749124856
[2025-12-01 12:22:11] 2025-12-01 14:27:49,867 | INFO     | intersect: -15316478557.61617
[2025-12-01 12:22:11] 2025-12-01 14:27:49,868 | INFO     | chi2: 8.051434438442207
[2025-12-01 12:22:11] 2025-12-01 14:27:49,870 | INFO     | sum of square deviations: 191676175035.47787
[2025-12-01 12:22:11] 2025-12-01 14:27:49,889 | INFO     | sum of deviations: 2047918769937.5574
[2025-12-01 12:22:11] 2025-12-01 14:27:49,889 | INFO     | mean x: 1764572952.8016431
[2025-12-01 12:22:11] 2025-12-01 14:27:49,889 | INFO     | mean y: 3536255.3169014086
[2025-12-01 12:22:11] 2025-12-01 14:27:49,889 | INFO     | intersect: -18849626221.958923
[2025-12-01 12:22:11] 2025-12-01 14:27:49,890 | INFO     | chi2: 4.839354896502881
[2025-12-01 12:22:11] 2025-12-01 14:27:49,891 | INFO     | current chi2=4.839354896502881 (change=39.894500371300296 %)
[2025-12-01 12:22:11] 2025-12-01 14:27:49,892 | INFO     | sum of square deviations: 188321228515.75208
[2025-12-01 12:22:11] 2025-12-01 14:27:49,911 | INFO     | sum of deviations: 2283803103661.229
[2025-12-01 12:22:11] 2025-12-01 14:27:49,912 | INFO     | mean x: 1764572800.3388429
[2025-12-01 12:22:11] 2025-12-01 14:27:49,912 | INFO     | mean y: 3546964.236127509
[2025-12-01 12:22:11] 2025-12-01 14:27:49,912 | INFO     | intersect: -21395723154.23038
[2025-12-01 12:22:11] 2025-12-01 14:27:49,913 | INFO     | chi2: 3.0993410918370983
[2025-12-01 12:22:11] 2025-12-01 14:27:49,913 | INFO     | current chi2=3.0993410918370983 (change=35.95549080153615 %)
[2025-12-01 12:22:11] 2025-12-01 14:27:49,915 | INFO     | sum of square deviations: 185005420532.89084
[2025-12-01 12:22:11] 2025-12-01 14:27:49,934 | INFO     | sum of deviations: 2344788058236.7236
[2025-12-01 12:22:11] 2025-12-01 14:27:49,934 | INFO     | mean x: 1764572647.8705463
[2025-12-01 12:22:11] 2025-12-01 14:27:49,934 | INFO     | mean y: 3549764.1258907365
[2025-12-01 12:22:11] 2025-12-01 14:27:49,934 | INFO     | intersect: -22360923993.995296
[2025-12-01 12:22:11] 2025-12-01 14:27:49,936 | INFO     | chi2: 2.8735473420804425
[2025-12-01 12:22:11] 2025-12-01 14:27:49,936 | INFO     | current chi2=2.8735473420804425 (change=7.285217827471166 %)
[2025-12-01 12:22:11] 2025-12-01 14:27:49,936 | INFO     | right removable region: 841
[2025-12-01 12:22:11] 2025-12-01 14:27:49,937 | INFO     | sum of square deviations: 191672899945.47766
[2025-12-01 12:22:11] 2025-12-01 14:27:49,956 | INFO     | sum of deviations: 1363855852753.1572
[2025-12-01 12:22:11] 2025-12-01 14:27:49,957 | INFO     | mean x: 1764573257.8016431
[2025-12-01 12:22:11] 2025-12-01 14:27:49,957 | INFO     | mean y: 3535130.1725352113
[2025-12-01 12:22:11] 2025-12-01 14:27:49,957 | INFO     | intersect: -12552353396.317402
[2025-12-01 12:22:11] 2025-12-01 14:27:49,958 | INFO     | chi2: 5.455174846538669
[2025-12-01 12:22:11] 2025-12-01 14:27:49,958 | INFO     | current chi2=5.455174846538669 (change=32.2459260117364 %)
[2025-12-01 12:22:11] 2025-12-01 14:27:49,959 | INFO     | sum of square deviations: 188315770162.46262
[2025-12-01 12:22:11] 2025-12-01 14:27:49,976 | INFO     | sum of deviations: 1297844857106.8408
[2025-12-01 12:22:11] 2025-12-01 14:27:49,977 | INFO     | mean x: 1764573410.3140495
[2025-12-01 12:22:11] 2025-12-01 14:27:49,977 | INFO     | mean y: 3538127.500590319
[2025-12-01 12:22:11] 2025-12-01 14:27:49,977 | INFO     | intersect: -12157644781.332966
[2025-12-01 12:22:11] 2025-12-01 14:27:49,978 | INFO     | chi2: 5.416829462243573
[2025-12-01 12:22:11] 2025-12-01 14:27:49,979 | INFO     | current chi2=5.416829462243573 (change=0.7029176034463153 %)
[2025-12-01 12:22:11] 2025-12-01 14:27:49,979 | INFO     | left removable region: 20
[2025-12-01 12:22:11] 2025-12-01 14:27:49,980 | INFO     | sum of square deviations: 171496706539.36673
[2025-12-01 12:22:11] 2025-12-01 14:27:49,997 | INFO     | sum of deviations: 1872809957561.2397
[2025-12-01 12:22:11] 2025-12-01 14:27:49,997 | INFO     | mean x: 1764573227.415347
[2025-12-01 12:22:11] 2025-12-01 14:27:49,997 | INFO     | mean y: 3571939.298416565
[2025-12-01 12:22:11] 2025-12-01 14:27:49,997 | INFO     | intersect: -19266245993.857323
[2025-12-01 12:22:11] 2025-12-01 14:27:49,999 | INFO     | chi2: 0.1959305479583787
[2025-12-01 12:22:11] 2025-12-01 14:27:49,999 | INFO     | current memory leak: 10.92 B/s (using 821 data points, chi2=0.20)
[2025-12-01 12:22:11] 2025-12-01 14:27:50,000 | INFO     | could have reported an average CPU frequency of 2582 MHz (32 samples)
[2025-12-01 12:22:11] 2025-12-01 14:27:50,000 | INFO     | ..............................
[2025-12-01 12:22:11] 2025-12-01 14:27:50,000 | INFO     | . Timing measurements:
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . get job = 0 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . initial setup = 2 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . payload setup = 17 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . stage-in = 0 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . payload execution = 52258 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . stage-out = 4 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | . log creation = 1 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,001 | INFO     | ..............................
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | 
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | job summary report
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | --------------------------------------------------
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | PanDA job id: 6897928633
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | task id: 47531111
[2025-12-01 12:22:11] 2025-12-01 14:27:50,548 | INFO     | errors: (none)
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | pilot state: finished 
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | transexitcode: 0
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | exeerrorcode: 0
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | exeerrordiag: 
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | exitcode: 0
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | exitmsg: OK
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | cpuconsumptiontime: 262298 s
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | nevents: 1000
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | neventsw: 0
[2025-12-01 12:22:11] 2025-12-01 14:27:50,549 | INFO     | pid: 3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | pgrp: 3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | corecount: 8
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | event service: False
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | sizes: {0: 2284273, 1: 2284472, 7: 2284734, 12: 2284762, 52279: 2354666, 52280: 2354665, 52285: 2363843, 52286: 2363899, 52309: 2364145}
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | --------------------------------------------------
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | 
[2025-12-01 12:22:11] 2025-12-01 14:27:50,550 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 12:22:11] 2025-12-01 14:27:50,604 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,605 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,606 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | job 6897928633 has completed (purged errors)
[2025-12-01 12:22:11] 2025-12-01 14:27:50,607 | INFO     | overall cleanup function is called
[2025-12-01 12:22:11] 2025-12-01 14:27:51,626 | INFO     | --- collectZombieJob: --- 10, [3172286]
[2025-12-01 12:22:11] 2025-12-01 14:27:51,626 | INFO     | zombie collector waiting for pid 3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:51,626 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 12:22:11] 2025-12-01 14:27:51,626 | INFO     | collected zombie processes
[2025-12-01 12:22:11] 2025-12-01 14:27:51,626 | INFO     | will attempt to kill all subprocesses of pid=3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:52,047 | INFO     | process IDs to be killed: [3172286] (in reverse order)
[2025-12-01 12:22:11] 2025-12-01 14:27:52,283 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 12:22:11] 2025-12-01 14:27:52,283 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 12:22:11] 2025-12-01 14:27:52,298 | INFO     | did not find any defunct processes belonging to 3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:52,316 | INFO     | did not find any defunct processes belonging to 3172286
[2025-12-01 12:22:11] 2025-12-01 14:27:52,322 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 12:22:11] 2025-12-01 14:27:52,322 | INFO     | ready for new job
[2025-12-01 12:22:11] 2025-12-01 14:27:52,322 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 12:22:11] 2025-12-01 14:27:52,331 | INFO     | ***************************************
[2025-12-01 12:22:11] 2025-12-01 14:27:52,331 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 12:22:11] 2025-12-01 14:27:52,331 | INFO     | ***************************************
[2025-12-01 12:22:11] 2025-12-01 14:27:52,331 | INFO     | 
[2025-12-01 12:22:11] 2025-12-01 14:27:52,333 | INFO     | architecture information:
[2025-12-01 12:22:11] 2025-12-01 14:27:52,338 | INFO     | executing command: cat /etc/os-release
[2025-12-01 12:22:11] 2025-12-01 14:27:52,383 | INFO     | cat /etc/os-release:
[2025-12-01 12:22:11] NAME="CentOS Linux"
[2025-12-01 12:22:11] VERSION="7 (Core)"
[2025-12-01 12:22:11] ID="centos"
[2025-12-01 12:22:11] ID_LIKE="rhel fedora"
[2025-12-01 12:22:11] VERSION_ID="7"
[2025-12-01 12:22:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 12:22:11] ANSI_COLOR="0;31"
[2025-12-01 12:22:11] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 12:22:11] HOME_URL="https://www.centos.org/"
[2025-12-01 12:22:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 12:22:11] 
[2025-12-01 12:22:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 12:22:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 12:22:11] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 12:22:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 12:22:11] 
[2025-12-01 12:22:11] 2025-12-01 14:27:52,383 | INFO     | ***************************************
[2025-12-01 12:22:11] 2025-12-01 14:27:52,887 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 12:22:11] 2025-12-01 14:27:52,956 | INFO     | sufficient remaining disk space (50336890880 B)
[2025-12-01 12:22:11] 2025-12-01 14:27:52,956 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 12:22:11] 2025-12-01 14:27:52,957 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 12:22:11] 2025-12-01 14:27:52,957 | INFO     | update_server=False
[2025-12-01 12:22:11] 2025-12-01 14:27:52,957 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 12:22:11] 2025-12-01 14:27:53,008 | INFO     | all job control threads have been joined
[2025-12-01 12:22:11] 2025-12-01 14:27:53,439 | INFO     | all data control threads have been joined
[2025-12-01 12:22:11] 2025-12-01 14:27:53,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 12:22:11] 2025-12-01 14:27:53,568 | INFO     | aborting loop
[2025-12-01 12:22:11] 2025-12-01 14:27:53,976 | INFO     | [job] retrieve thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,016 | INFO     | [job] control thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,138 | INFO     | all payload control threads have been joined
[2025-12-01 12:22:11] 2025-12-01 14:27:54,284 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,291 | INFO     | [job] validate thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,321 | INFO     | [payload] failed_post thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,446 | INFO     | [data] control thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,455 | INFO     | [data] copytool_in thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,459 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 12:22:11] 2025-12-01 14:27:54,574 | INFO     | [job] job monitor thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,585 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,616 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:54,634 | INFO     | [payload] validate_post thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:55,005 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:55,128 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 12:22:11] 2025-12-01 14:27:55,146 | INFO     | [payload] control thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:56,134 | INFO     | [job] queue monitor thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:27:56,242 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 12:22:11] 2025-12-01 14:27:56,466 | INFO     | [data] copytool_out thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:28:00,254 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 12:22:11] 2025-12-01 14:28:11,850 | INFO     | [monitor] cgroup control has ended
[2025-12-01 12:22:11] 2025-12-01 14:28:13,402 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139940913719104)>', '<ExcThread(monitor, started 139940276979456)>']
[2025-12-01 12:22:11] 2025-12-01 14:28:18,428 | INFO     | all workflow threads have been joined
[2025-12-01 12:22:11] 2025-12-01 14:28:18,428 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 12:22:11] 2025-12-01 14:28:18,428 | INFO     | traces error code: 0
[2025-12-01 12:22:11] 2025-12-01 14:28:18,429 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 12:22:11] 2025-12-01 14:28:23,276 | INFO     | PID=3162123 has CPU usage=2.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-01 12:22:11] 2025-12-01 14:28:23,277 | INFO     | .. there are 8 such processes running
[2025-12-01 12:22:11] 2025-12-01 14:28:23,278 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 12:22:11] 2025-12-01 14:28:23,278 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 12:22:11] 2025-12-01 14:28:23,278 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 12:22:11] 2025-12-01 14:28:23,278 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 12:22:11] 2025-12-01 14:28:23,278 | INFO     | [monitor] control thread has ended
[2025-12-01 12:22:11] 2025-12-01 14:28:23,453 [wrapper] ==== pilot stdout END ====
[2025-12-01 12:22:11] 2025-12-01 14:28:23,466 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 12:22:11] 2025-12-01 14:28:23,480 [wrapper] pilotpid: 3162123
[2025-12-01 12:22:11] 2025-12-01 14:28:23,497 [wrapper] Pilot exit status: 0
[2025-12-01 12:22:11] 2025-12-01 14:28:23,593 [wrapper] pandaids: 6897928633
[2025-12-01 12:22:11] 2025-12-01 14:28:23,642 [wrapper] cleanup supervisor_pilot  212814 3162124
[2025-12-01 12:22:11] 2025-12-01 14:28:23,645 [wrapper] Test setup, not cleaning
[2025-12-01 12:22:11] 2025-12-01 14:28:23,650 [wrapper] apfmon messages muted
[2025-12-01 12:22:11] 2025-12-01 14:28:23,653 [wrapper] ==== wrapper stdout END ====
[2025-12-01 12:22:11] 2025-12-01 14:28:23,656 [wrapper] ==== wrapper stderr END ====
[2025-12-01 12:22:11]  *** Error codes and diagnostics ***
[2025-12-01 12:22:11]     "exeErrorCode": 0,
[2025-12-01 12:22:11]     "exeErrorDiag": "",
[2025-12-01 12:22:11]     "pilotErrorCode": 0,
[2025-12-01 12:22:11]     "pilotErrorDiag": "",
[2025-12-01 12:22:11]  *** Listing of results directory ***
[2025-12-01 12:22:11] total 1081912
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-12-01 12:22:11] -rwx------. 1 boincer umatlas     36292 Nov 28 17:43 runpilot2-wrapper.sh
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas      5112 Nov 28 17:43 queuedata.json
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas       100 Nov 30 18:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 12:22:11] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 30 18:55 run_atlas
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas       105 Nov 30 18:55 job.xml
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas 376722251 Nov 30 18:55 EVNT.47531104._000001.pool.root.1
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas    590116 Nov 30 18:55 input.tar.gz
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 30 18:55 start_atlas.sh
[2025-12-01 12:22:11] drwxrwx--x. 2 boincer umatlas      4096 Nov 30 18:55 shared
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas         0 Nov 30 18:55 boinc_lockfile
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas      2876 Nov 30 18:55 pandaJob.out
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas        57 Nov 30 18:55 setup.sh.local
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas    993245 Nov 30 18:55 agis_schedconf.cvmfs.json
[2025-12-01 12:22:11] drwx------. 5 boincer umatlas      4096 Nov 30 18:55 pilot3
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas       533 Dec  1 09:11 boinc_task_state.xml
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas 708688698 Dec  1 09:26 HITS.47531111._000025.pool.root.1
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas      1056 Dec  1 09:27 memory_monitor_summary.json
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas   1516240 Dec  1 09:27 agis_ddmendpoints.agis.ALL.json
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas   2149315 Dec  1 09:27 log.47531111._000025.job.log.tgz.1
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas     28015 Dec  1 09:27 heartbeat.json
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas        95 Dec  1 09:28 pilot_heartbeat.json
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas       822 Dec  1 09:28 pilotlog.txt
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas   7106809 Dec  1 09:28 log.47531111._000025.job.log.1
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas       353 Dec  1 09:28 output.list
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas       620 Dec  1 09:28 runtime_log
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas   9297920 Dec  1 09:28 result.tar.gz
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas      9343 Dec  1 09:28 runtime_log.err
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas       660 Dec  1 09:28 pAQODmUMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiSLKDmNSgnkm.diag
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas      6663 Dec  1 12:22 init_data.xml
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas      8192 Dec  1 12:22 boinc_mmap_file
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas        29 Dec  1 12:22 wrapper_checkpoint.txt
[2025-12-01 12:22:11] -rw-r--r--. 1 boincer umatlas     21152 Dec  1 12:22 stderr.txt
[2025-12-01 12:22:11] HITS file was successfully produced:
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas 708688698 Dec  1 09:26 shared/HITS.pool.root.1
[2025-12-01 12:22:11]  *** Contents of shared directory: ***
[2025-12-01 12:22:11] total 1069656
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas 376722251 Nov 30 18:55 ATLAS.root_0
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas    590116 Nov 30 18:55 input.tar.gz
[2025-12-01 12:22:11] -rw-r--r--. 2 boincer umatlas     15847 Nov 30 18:55 start_atlas.sh
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas 708688698 Dec  1 09:26 HITS.pool.root.1
[2025-12-01 12:22:11] -rw-------. 1 boincer umatlas   9297920 Dec  1 09:28 result.tar.gz
12:22:13 (3158468): run_atlas exited; CPU time 263180.079980
12:22:13 (3158468): called boinc_finish(0)

</stderr_txt>
]]>

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