Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:08:30 (3819831): wrapper (7.7.26015): starting
16:08:30 (3819831): wrapper: running run_atlas (--nthreads 4)
[2025-12-04 16:08:30] Arguments: --nthreads 4
[2025-12-04 16:08:30] Threads: 4
[2025-12-04 16:08:30] Checking for CVMFS
[2025-12-04 16:08:31] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-04 16:08:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-04 16:08:31] Running cvmfs_config stat atlas.cern.ch
[2025-12-04 16:08:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-04 16:08:31] 2.9.2.0 64599 23524 103788 153639 2 68 35706632 36864000 0 130560 0 9279672 99.961 1004196 1273 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-04 16:08:31] CVMFS is ok
[2025-12-04 16:08:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-04 16:08:31] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-04 16:08:31] Further information can be found at the LHC@home message board.
[2025-12-04 16:08:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-04 16:08:31] Checking for apptainer binary...
[2025-12-04 16:08:31] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-04 16:08:31] Running /usr/bin/apptainer --version
[2025-12-04 16:08:31] apptainer version 1.4.1-1.1
[2025-12-04 16:08:31] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-04 16:08:31] thA314
[2025-12-04 16:08:31] apptainer works
[2025-12-04 16:08:31] Set ATHENA_PROC_NUMBER=4
[2025-12-04 16:08:31] Set ATHENA_CORE_NUMBER=4
[2025-12-04 16:08:31] Starting ATLAS job with PandaID=6899133325
[2025-12-04 16:08:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-04 22:01:12]  *** The last 200 lines of the pilot log: ***
[2025-12-04 22:01:12] 2025-12-04 21:00:35,618 | INFO     | time since job start (21116s) is within the limit (172800.0s)
[2025-12-04 22:01:12] 2025-12-04 21:00:36,580 | INFO     | monitor loop #1608: job 0:6899133325 is in state 'finished'
[2025-12-04 22:01:12] 2025-12-04 21:00:36,580 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-04 22:01:12] 2025-12-04 21:00:37,624 | INFO     | time since job start (21118s) is within the limit (172800.0s)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,553 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-04 22:01:12] 2025-12-04 21:00:38,555 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3545.6788749999996
[2025-12-04 22:01:12] 2025-12-04 21:00:38,556 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6899133325/memory_monitor_summary.json (trf name=prmon)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,557 | INFO     | extracted standard info from prmon json
[2025-12-04 22:01:12] 2025-12-04 21:00:38,557 | INFO     | extracted standard memory fields from prmon json
[2025-12-04 22:01:12] 2025-12-04 21:00:38,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-04 22:01:12] 2025-12-04 21:00:38,559 | INFO     | fitting pss+swap vs Time
[2025-12-04 22:01:12] 2025-12-04 21:00:38,560 | INFO     | sum of square deviations: 12844082682.5
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | sum of deviations: 179329977334.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | mean x: 1764871467.5
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | mean y: 2792779.289017341
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | intersect: -24638465618.667294
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | chi2: 5.1466532346630265
[2025-12-04 22:01:12] 2025-12-04 21:00:38,561 | INFO     | sum of square deviations: 12295263090.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,562 | INFO     | sum of deviations: 250570444566.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,562 | INFO     | mean x: 1764871315.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,562 | INFO     | mean y: 2812476.914956012
[2025-12-04 22:01:12] 2025-12-04 21:00:38,562 | INFO     | intersect: -35964257667.44021
[2025-12-04 22:01:12] 2025-12-04 21:00:38,563 | INFO     | chi2: 3.2257465736877062
[2025-12-04 22:01:12] 2025-12-04 21:00:38,563 | INFO     | current chi2=3.2257465736877062 (change=37.32341335992671 %)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,563 | INFO     | sum of square deviations: 11762304260.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | sum of deviations: 245190733633.49997
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | mean x: 1764871162.5
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | mean y: 2810937.7053571427
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | intersect: -36786753890.46913
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | chi2: 3.2244372737492712
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | current chi2=3.2244372737492712 (change=0.04058905151182343 %)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | right removable region: 335
[2025-12-04 22:01:12] 2025-12-04 21:00:38,564 | INFO     | sum of square deviations: 12295263090.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | sum of deviations: 73551341944.00002
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | mean x: 1764871620.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | mean y: 2822130.5571847507
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | intersect: -10554794657.281818
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | chi2: 2.473996198596623
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | current chi2=2.473996198596623 (change=51.930000219674675 %)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,566 | INFO     | sum of square deviations: 11762304260.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | sum of deviations: 36589951104.000015
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | mean x: 1764871772.5
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | mean y: 2832642.511904762
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | intersect: -5487296709.116076
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | chi2: 1.9953536759958688
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | current chi2=1.9953536759958688 (change=19.346938482454604 %)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,567 | INFO     | left removable region: 20
[2025-12-04 22:01:12] 2025-12-04 21:00:38,568 | INFO     | sum of square deviations: 9691828230.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | sum of deviations: 85085406224.99998
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | mean x: 1764871742.0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | mean y: 2858477.292063492
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | intersect: -15491104636.733675
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | chi2: 0.016471967962301166
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | current memory leak: 8.78 B/s (using 315 data points, chi2=0.02)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | could have reported an average CPU frequency of 3829 MHz (15 samples)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | ..............................
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . Timing measurements:
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . get job = 0 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . initial setup = 1 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . payload setup = 7 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . stage-in = 0 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . payload execution = 21083 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . stage-out = 1 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | . log creation = 0 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,569 | INFO     | ..............................
[2025-12-04 22:01:12] 2025-12-04 21:00:38,609 | INFO     | 
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | job summary report
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | --------------------------------------------------
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | PanDA job id: 6899133325
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | task id: 47531058
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | errors: (none)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | pilot state: finished 
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | transexitcode: 0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | exeerrorcode: 0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | exeerrordiag: 
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | exitcode: 0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | exitmsg: OK
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | cpuconsumptiontime: 82274 s
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | nevents: 1000
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | neventsw: 0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | pid: 3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | pgrp: 3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | corecount: 4
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | event service: False
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | sizes: {0: 2284450, 3: 2284712, 10: 2284740, 21094: 2338072, 21096: 2347072, 21098: 2347128, 21105: 2347502}
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | --------------------------------------------------
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | 
[2025-12-04 22:01:12] 2025-12-04 21:00:38,610 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-04 22:01:12] 2025-12-04 21:00:38,630 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,630 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,630 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,630 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,630 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | job 6899133325 has completed (purged errors)
[2025-12-04 22:01:12] 2025-12-04 21:00:38,631 | INFO     | overall cleanup function is called
[2025-12-04 22:01:12] 2025-12-04 21:00:39,641 | INFO     | --- collectZombieJob: --- 10, [3830874]
[2025-12-04 22:01:12] 2025-12-04 21:00:39,641 | INFO     | zombie collector waiting for pid 3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:39,641 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-04 22:01:12] 2025-12-04 21:00:39,642 | INFO     | collected zombie processes
[2025-12-04 22:01:12] 2025-12-04 21:00:39,642 | INFO     | will attempt to kill all subprocesses of pid=3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:39,696 | INFO     | process IDs to be killed: [3830874] (in reverse order)
[2025-12-04 22:01:12] 2025-12-04 21:00:39,734 | WARNING  | found no corresponding commands to process id(s)
[2025-12-04 22:01:12] 2025-12-04 21:00:39,734 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-04 22:01:12] 2025-12-04 21:00:39,736 | INFO     | did not find any defunct processes belonging to 3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:39,738 | INFO     | did not find any defunct processes belonging to 3830874
[2025-12-04 22:01:12] 2025-12-04 21:00:39,739 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-04 22:01:12] 2025-12-04 21:00:39,739 | INFO     | ready for new job
[2025-12-04 22:01:12] 2025-12-04 21:00:39,739 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-04 22:01:12] 2025-12-04 21:00:39,740 | INFO     | ***************************************
[2025-12-04 22:01:12] 2025-12-04 21:00:39,740 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-04 22:01:12] 2025-12-04 21:00:39,740 | INFO     | ***************************************
[2025-12-04 22:01:12] 2025-12-04 21:00:39,740 | INFO     | 
[2025-12-04 22:01:12] 2025-12-04 21:00:39,741 | INFO     | architecture information:
[2025-12-04 22:01:12] 2025-12-04 21:00:39,741 | INFO     | executing command: cat /etc/os-release
[2025-12-04 22:01:12] 2025-12-04 21:00:39,756 | INFO     | cat /etc/os-release:
[2025-12-04 22:01:12] NAME="CentOS Linux"
[2025-12-04 22:01:12] VERSION="7 (Core)"
[2025-12-04 22:01:12] ID="centos"
[2025-12-04 22:01:12] ID_LIKE="rhel fedora"
[2025-12-04 22:01:12] VERSION_ID="7"
[2025-12-04 22:01:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-04 22:01:12] ANSI_COLOR="0;31"
[2025-12-04 22:01:12] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-04 22:01:12] HOME_URL="https://www.centos.org/"
[2025-12-04 22:01:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-04 22:01:12] 
[2025-12-04 22:01:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-04 22:01:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-04 22:01:12] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-04 22:01:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-04 22:01:12] 
[2025-12-04 22:01:12] 2025-12-04 21:00:39,756 | INFO     | ***************************************
[2025-12-04 22:01:12] 2025-12-04 21:00:40,260 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | INFO     | sufficient remaining disk space (222286577664 B)
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | INFO     | current server update state: UPDATING_FINAL
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | INFO     | update_server=False
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-04 22:01:12] 2025-12-04 21:00:40,279 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-04 22:01:12] 2025-12-04 21:00:40,280 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-04 22:01:12] 2025-12-04 21:00:40,280 | INFO     | aborting loop
[2025-12-04 22:01:12] 2025-12-04 21:00:40,528 | INFO     | all job control threads have been joined
[2025-12-04 22:01:12] 2025-12-04 21:00:40,776 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-04 22:01:12] 2025-12-04 21:00:40,839 | INFO     | all payload control threads have been joined
[2025-12-04 22:01:12] 2025-12-04 21:00:40,910 | INFO     | all data control threads have been joined
[2025-12-04 22:01:12] 2025-12-04 21:00:41,285 | INFO     | [job] retrieve thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,285 | INFO     | [job] queue monitor thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,286 | INFO     | [job] job monitor thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,378 | INFO     | [data] copytool_in thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,534 | INFO     | [job] control thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,613 | INFO     | [payload] validate_post thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,623 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,845 | INFO     | [payload] control thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,916 | INFO     | [data] control thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:41,924 | INFO     | [job] create_data_payload thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:42,092 | INFO     | [job] validate thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:42,272 | INFO     | [payload] execute_payloads thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:42,428 | INFO     | [payload] validate_pre thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:42,528 | INFO     | [payload] failed_post thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:42,760 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-04 22:01:12] 2025-12-04 21:00:42,782 | INFO     | [data] copytool_out thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:00:46,767 | INFO     | [data] queue_monitor thread has finished
[2025-12-04 22:01:12] 2025-12-04 21:01:04,978 | INFO     | [monitor] cgroup control has ended
[2025-12-04 22:01:12] 2025-12-04 21:01:07,042 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139877037094720)>', '<ExcThread(monitor, started 139875735037696)>']
[2025-12-04 22:01:12] 2025-12-04 21:01:10,754 | INFO     | PID=3823631 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-04 22:01:12] 2025-12-04 21:01:10,755 | INFO     | found 0 job(s) in 20 queues
[2025-12-04 22:01:12] 2025-12-04 21:01:10,755 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-04 22:01:12] 2025-12-04 21:01:10,755 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-04 22:01:12] 2025-12-04 21:01:10,755 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-04 22:01:12] 2025-12-04 21:01:10,755 | INFO     | [monitor] control thread has ended
[2025-12-04 22:01:12] 2025-12-04 21:01:12,068 | INFO     | all workflow threads have been joined
[2025-12-04 22:01:12] 2025-12-04 21:01:12,068 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-04 22:01:12] 2025-12-04 21:01:12,068 | INFO     | traces error code: 0
[2025-12-04 22:01:12] 2025-12-04 21:01:12,069 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-04 22:01:12] 2025-12-04 21:01:12,151 [wrapper] ==== pilot stdout END ====
[2025-12-04 22:01:12] 2025-12-04 21:01:12,155 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-04 22:01:12] 2025-12-04 21:01:12,159 [wrapper] pilotpid: 3823631
[2025-12-04 22:01:12] 2025-12-04 21:01:12,163 [wrapper] Pilot exit status: 0
[2025-12-04 22:01:12] 2025-12-04 21:01:12,175 [wrapper] pandaids: 6899133325
[2025-12-04 22:01:12] 2025-12-04 21:01:12,200 [wrapper] cleanup supervisor_pilot 3880699 3823632
[2025-12-04 22:01:12] 2025-12-04 21:01:12,204 [wrapper] Test setup, not cleaning
[2025-12-04 22:01:12] 2025-12-04 21:01:12,208 [wrapper] apfmon messages muted
[2025-12-04 22:01:12] 2025-12-04 21:01:12,212 [wrapper] ==== wrapper stdout END ====
[2025-12-04 22:01:12] 2025-12-04 21:01:12,216 [wrapper] ==== wrapper stderr END ====
[2025-12-04 22:01:12]  *** Error codes and diagnostics ***
[2025-12-04 22:01:12]     "exeErrorCode": 0,
[2025-12-04 22:01:12]     "exeErrorDiag": "",
[2025-12-04 22:01:12]     "pilotErrorCode": 0,
[2025-12-04 22:01:12]     "pilotErrorDiag": "",
[2025-12-04 22:01:12]  *** Listing of results directory ***
[2025-12-04 22:01:12] total 1051620
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc    576529 Nov 28 23:41 pilot3.tar.gz
[2025-12-04 22:01:12] -rwx------ 1 boinc boinc     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc      5112 Nov 28 23:43 queuedata.json
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc       100 Dec  4 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-04 22:01:12] -rwxr-xr-x 1 boinc boinc      7986 Dec  4 16:08 run_atlas
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc       105 Dec  4 16:08 job.xml
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc 375861086 Dec  4 16:08 EVNT.47531050._000498.pool.root.1
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc    590123 Dec  4 16:08 input.tar.gz
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc     15847 Dec  4 16:08 start_atlas.sh
[2025-12-04 22:01:12] drwxrwx--x 2 boinc boinc      4096 Dec  4 16:08 shared
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc         0 Dec  4 16:08 boinc_setup_complete
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc      6378 Dec  4 16:08 init_data.xml
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc         0 Dec  4 16:08 boinc_lockfile
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc      2877 Dec  4 16:08 pandaJob.out
[2025-12-04 22:01:12] -rw------- 1 boinc boinc    985572 Dec  4 16:08 agis_schedconf.cvmfs.json
[2025-12-04 22:01:12] drwx------ 5 boinc boinc      4096 Dec  4 16:08 pilot3
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc       531 Dec  4 21:56 boinc_task_state.xml
[2025-12-04 22:01:12] -rw------- 1 boinc boinc 688448630 Dec  4 22:00 HITS.47531058._001151.pool.root.1
[2025-12-04 22:01:12] -rw------- 1 boinc boinc      1029 Dec  4 22:00 memory_monitor_summary.json
[2025-12-04 22:01:12] -rw------- 1 boinc boinc   1516240 Dec  4 22:00 agis_ddmendpoints.agis.ALL.json
[2025-12-04 22:01:12] -rw------- 1 boinc boinc   1305147 Dec  4 22:00 log.47531058._001151.job.log.tgz.1
[2025-12-04 22:01:12] -rw------- 1 boinc boinc     27369 Dec  4 22:00 heartbeat.json
[2025-12-04 22:01:12] -rw------- 1 boinc boinc        95 Dec  4 22:01 pilot_heartbeat.json
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc      8192 Dec  4 22:01 boinc_mmap_file
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc        28 Dec  4 22:01 wrapper_checkpoint.txt
[2025-12-04 22:01:12] -rw------- 1 boinc boinc      4752 Dec  4 22:01 pilotlog.txt
[2025-12-04 22:01:12] -rw------- 1 boinc boinc   2995652 Dec  4 22:01 log.47531058._001151.job.log.1
[2025-12-04 22:01:12] -rw------- 1 boinc boinc       353 Dec  4 22:01 output.list
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc       620 Dec  4 22:01 runtime_log
[2025-12-04 22:01:12] -rw------- 1 boinc boinc   4341760 Dec  4 22:01 result.tar.gz
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc      8898 Dec  4 22:01 runtime_log.err
[2025-12-04 22:01:12] -rw------- 1 boinc boinc       665 Dec  4 22:01 YMaKDmTMMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjjOKDmEGsGOn.diag
[2025-12-04 22:01:12] -rw-r--r-- 1 boinc boinc     21266 Dec  4 22:01 stderr.txt
[2025-12-04 22:01:12] HITS file was successfully produced:
[2025-12-04 22:01:12] -rw------- 1 boinc boinc 688448630 Dec  4 22:00 shared/HITS.pool.root.1
[2025-12-04 22:01:12]  *** Contents of shared directory: ***
[2025-12-04 22:01:12] total 1044212
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc 375861086 Dec  4 16:08 ATLAS.root_0
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc    590123 Dec  4 16:08 input.tar.gz
[2025-12-04 22:01:12] -rw-r--r-- 2 boinc boinc     15847 Dec  4 16:08 start_atlas.sh
[2025-12-04 22:01:12] -rw------- 1 boinc boinc 688448630 Dec  4 22:00 HITS.pool.root.1
[2025-12-04 22:01:12] -rw------- 1 boinc boinc   4341760 Dec  4 22:01 result.tar.gz
22:01:14 (3819831): run_atlas exited; CPU time 82283.700788
22:01:14 (3819831): called boinc_finish(0)

</stderr_txt>
]]>

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