Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
02:27:00 (1748470): wrapper (7.7.26015): starting
02:27:00 (1748470): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 02:27:00] Arguments: --nthreads 10
[2025-12-02 02:27:00] Threads: 10
[2025-12-02 02:27:00] Checking for CVMFS
[2025-12-02 02:27:00] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 02:27:00] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 02:27:00] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 02:27:00] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 02:27:00] 2.13.3.0 4125 1127 63508 153552 2 109 2081239 4096001 11888 130560 0 172203831 99.999 268600 736 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-02 02:27:00] CVMFS is ok
[2025-12-02 02:27:00] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 02:27:00] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 02:27:00] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 02:27:00] Further information can be found at the LHC@home message board.
[2025-12-02 02:27:00] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 02:27:00] Checking for apptainer binary...
[2025-12-02 02:27:00] apptainer is not installed, using version from CVMFS
[2025-12-02 02:27:00] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 02:27:00] 7950x-linux
[2025-12-02 02:27:00] apptainer works
[2025-12-02 02:27:00] Set ATHENA_PROC_NUMBER=10
[2025-12-02 02:27:00] Set ATHENA_CORE_NUMBER=10
[2025-12-02 02:27:00] Starting ATLAS job with PandaID=6899498284
[2025-12-02 02:27:00] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc523/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 19:54:06]  *** The last 200 lines of the pilot log: ***
[2025-12-02 19:54:06] 2025-12-03 03:53:03,917 | INFO     | monitor loop #4545: job 0:6899498284 is in state 'finished'
[2025-12-02 19:54:06] 2025-12-03 03:53:03,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 19:54:06] 2025-12-03 03:53:04,720 | INFO     | time since job start (62749s) is within the limit (172800.0s)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,071 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 19:54:06] 2025-12-03 03:53:06,074 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.1387812499997
[2025-12-02 19:54:06] 2025-12-03 03:53:06,077 | INFO     | using path: /var/lib/multiboinc/boinc523/slots/3/PanDA_Pilot-6899498284/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,077 | INFO     | extracted standard info from prmon json
[2025-12-02 19:54:06] 2025-12-03 03:53:06,077 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 19:54:06] 2025-12-03 03:53:06,077 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 19:54:06] 2025-12-03 03:53:06,086 | INFO     | fitting pss+swap vs Time
[2025-12-02 19:54:06] 2025-12-03 03:53:06,087 | INFO     | sum of square deviations: 336866137517.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,098 | INFO     | sum of deviations: 2385484598595.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,099 | INFO     | mean x: 1764702587.5
[2025-12-02 19:54:06] 2025-12-03 03:53:06,099 | INFO     | mean y: 3176241.3287937744
[2025-12-02 19:54:06] 2025-12-03 03:53:06,099 | INFO     | intersect: -12493392498.44118
[2025-12-02 19:54:06] 2025-12-03 03:53:06,099 | INFO     | chi2: 4.676962852509198
[2025-12-02 19:54:06] 2025-12-03 03:53:06,102 | INFO     | sum of square deviations: 331974641152.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,118 | INFO     | sum of deviations: 2692571713168.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,118 | INFO     | mean x: 1764702435.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,118 | INFO     | mean y: 3185806.734115347
[2025-12-02 19:54:06] 2025-12-03 03:53:06,119 | INFO     | intersect: -14309919080.286755
[2025-12-02 19:54:06] 2025-12-03 03:53:06,119 | INFO     | chi2: 2.3410269848892966
[2025-12-02 19:54:06] 2025-12-03 03:53:06,119 | INFO     | current chi2=2.3410269848892966 (change=49.94557239997466 %)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,120 | INFO     | sum of square deviations: 327130727074.5
[2025-12-02 19:54:06] 2025-12-03 03:53:06,138 | INFO     | sum of deviations: 2694164548096.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,138 | INFO     | mean x: 1764702282.5
[2025-12-02 19:54:06] 2025-12-03 03:53:06,138 | INFO     | mean y: 3185854.15324165
[2025-12-02 19:54:06] 2025-12-03 03:53:06,138 | INFO     | intersect: -14530448359.831299
[2025-12-02 19:54:06] 2025-12-03 03:53:06,139 | INFO     | chi2: 2.2909093917985954
[2025-12-02 19:54:06] 2025-12-03 03:53:06,139 | INFO     | current chi2=2.2909093917985954 (change=2.140837906363184 %)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,139 | INFO     | right removable region: 1017
[2025-12-02 19:54:06] 2025-12-03 03:53:06,140 | INFO     | sum of square deviations: 331974641152.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,151 | INFO     | sum of deviations: 2106035230188.0002
[2025-12-02 19:54:06] 2025-12-03 03:53:06,151 | INFO     | mean x: 1764702740.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,151 | INFO     | mean y: 3184941.176930596
[2025-12-02 19:54:06] 2025-12-03 03:53:06,151 | INFO     | intersect: -11192026019.37238
[2025-12-02 19:54:06] 2025-12-03 03:53:06,152 | INFO     | chi2: 2.7674022899432797
[2025-12-02 19:54:06] 2025-12-03 03:53:06,152 | INFO     | current chi2=2.7674022899432797 (change=40.82907268637885 %)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,152 | INFO     | sum of square deviations: 327130727074.5
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | sum of deviations: 2007825521798.501
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | mean x: 1764702892.5
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | mean y: 3188032.496070727
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | intersect: -10828003331.396238
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | chi2: 2.667510426344298
[2025-12-02 19:54:06] 2025-12-03 03:53:06,167 | INFO     | current chi2=2.667510426344298 (change=3.6095895404144143 %)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,168 | INFO     | left removable region: 20
[2025-12-02 19:54:06] 2025-12-03 03:53:06,168 | INFO     | sum of square deviations: 307300638058.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,183 | INFO     | sum of deviations: 2169033551453.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,183 | INFO     | mean x: 1764702862.0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,183 | INFO     | mean y: 3202388.5336008025
[2025-12-02 19:54:06] 2025-12-03 03:53:06,183 | INFO     | intersect: -12452677105.282135
[2025-12-02 19:54:06] 2025-12-03 03:53:06,184 | INFO     | chi2: 0.20213517313733104
[2025-12-02 19:54:06] 2025-12-03 03:53:06,184 | INFO     | current memory leak: 7.06 B/s (using 997 data points, chi2=0.20)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,184 | INFO     | could have reported an average CPU frequency of 4000 MHz (38 samples)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,184 | INFO     | ..............................
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . Timing measurements:
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . get job = 0 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . initial setup = 3 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . payload setup = 6 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . stage-in = 0 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . payload execution = 62711 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . stage-out = 6 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | . log creation = 0 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,185 | INFO     | ..............................
[2025-12-02 19:54:06] 2025-12-03 03:53:06,234 | INFO     | 
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | job summary report
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | --------------------------------------------------
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | PanDA job id: 6899498284
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | task id: 47556173
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | errors: (none)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | pilot state: finished 
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | transexitcode: 0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | exeerrorcode: 0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | exeerrordiag: 
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | exitcode: 0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | exitmsg: OK
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | cpuconsumptiontime: 137984 s
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | nevents: 1000
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | neventsw: 0
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | pid: 1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | pgrp: 1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | corecount: 10
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | event service: False
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | sizes: {0: 2284330, 5: 2284592, 11: 2284648, 62722: 2338852, 62729: 2347958, 62735: 2348148}
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | --------------------------------------------------
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | 
[2025-12-02 19:54:06] 2025-12-03 03:53:06,235 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc523/slots/3
[2025-12-02 19:54:06] 2025-12-03 03:53:06,254 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,254 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | job 6899498284 has completed (purged errors)
[2025-12-02 19:54:06] 2025-12-03 03:53:06,255 | INFO     | overall cleanup function is called
[2025-12-02 19:54:06] 2025-12-03 03:53:07,271 | INFO     | --- collectZombieJob: --- 10, [1759037]
[2025-12-02 19:54:06] 2025-12-03 03:53:07,271 | INFO     | zombie collector waiting for pid 1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:07,271 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 19:54:06] 2025-12-03 03:53:07,271 | INFO     | collected zombie processes
[2025-12-02 19:54:06] 2025-12-03 03:53:07,271 | INFO     | will attempt to kill all subprocesses of pid=1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:07,569 | INFO     | process IDs to be killed: [1759037] (in reverse order)
[2025-12-02 19:54:06] 2025-12-03 03:53:07,720 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 19:54:06] 2025-12-03 03:53:07,720 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 19:54:06] 2025-12-03 03:53:07,727 | INFO     | did not find any defunct processes belonging to 1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:07,734 | INFO     | did not find any defunct processes belonging to 1759037
[2025-12-02 19:54:06] 2025-12-03 03:53:07,735 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 19:54:06] 2025-12-03 03:53:07,735 | INFO     | ready for new job
[2025-12-02 19:54:06] 2025-12-03 03:53:07,735 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 19:54:06] 2025-12-03 03:53:07,738 | INFO     | ***************************************
[2025-12-02 19:54:06] 2025-12-03 03:53:07,738 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 19:54:06] 2025-12-03 03:53:07,738 | INFO     | ***************************************
[2025-12-02 19:54:06] 2025-12-03 03:53:07,738 | INFO     | 
[2025-12-02 19:54:06] 2025-12-03 03:53:07,740 | INFO     | architecture information:
[2025-12-02 19:54:06] 2025-12-03 03:53:07,740 | INFO     | executing command: cat /etc/os-release
[2025-12-02 19:54:06] 2025-12-03 03:53:07,766 | INFO     | cat /etc/os-release:
[2025-12-02 19:54:06] NAME="CentOS Linux"
[2025-12-02 19:54:06] VERSION="7 (Core)"
[2025-12-02 19:54:06] ID="centos"
[2025-12-02 19:54:06] ID_LIKE="rhel fedora"
[2025-12-02 19:54:06] VERSION_ID="7"
[2025-12-02 19:54:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 19:54:06] ANSI_COLOR="0;31"
[2025-12-02 19:54:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 19:54:06] HOME_URL="https://www.centos.org/"
[2025-12-02 19:54:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 19:54:06] 
[2025-12-02 19:54:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 19:54:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 19:54:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 19:54:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 19:54:06] 
[2025-12-02 19:54:06] 2025-12-03 03:53:07,767 | INFO     | ***************************************
[2025-12-02 19:54:06] 2025-12-03 03:53:08,269 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc523/slots/3
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | INFO     | sufficient remaining disk space (161194442752 B)
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | INFO     | update_server=False
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 19:54:06] 2025-12-03 03:53:08,285 | INFO     | aborting loop
[2025-12-02 19:54:06] 2025-12-03 03:53:08,297 | INFO     | all job control threads have been joined
[2025-12-02 19:54:06] 2025-12-03 03:53:08,330 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 19:54:06] 2025-12-03 03:53:08,356 | INFO     | all payload control threads have been joined
[2025-12-02 19:54:06] 2025-12-03 03:53:08,778 | INFO     | all data control threads have been joined
[2025-12-02 19:54:06] 2025-12-03 03:53:09,290 | INFO     | [job] retrieve thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,290 | INFO     | [job] job monitor thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,302 | INFO     | [job] control thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,361 | INFO     | [payload] control thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,668 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,668 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,783 | INFO     | [data] control thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:09,874 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,335 | INFO     | [data] copytool_out thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,353 | INFO     | [payload] validate_post thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,616 | INFO     | [data] copytool_in thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,616 | INFO     | [job] validate thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,748 | INFO     | [payload] failed_post thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,759 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:10,970 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 19:54:06] 2025-12-03 03:53:11,244 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 19:54:06] 2025-12-03 03:53:12,249 | INFO     | [job] queue monitor thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:14,975 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 19:54:06] 2025-12-03 03:53:38,175 | INFO     | PID=1752329 has CPU usage=4.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 19:54:06] 2025-12-03 03:53:38,175 | INFO     | .. there are 14 such processes running
[2025-12-02 19:54:06] 2025-12-03 03:53:38,175 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 19:54:06] 2025-12-03 03:53:38,175 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 19:54:06] 2025-12-03 03:53:38,175 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 19:54:06] 2025-12-03 03:53:59,382 | INFO     | [monitor] cgroup control has ended
[2025-12-02 19:54:06] 2025-12-03 03:54:01,405 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 126394063701824)>', '<ExcThread(monitor, started 126393287431936)>']
[2025-12-02 19:54:06] 2025-12-03 03:54:02,298 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 19:54:06] 2025-12-03 03:54:02,298 | INFO     | [monitor] control thread has ended
[2025-12-02 19:54:06] 2025-12-03 03:54:06,430 | INFO     | all workflow threads have been joined
[2025-12-02 19:54:06] 2025-12-03 03:54:06,430 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 19:54:06] 2025-12-03 03:54:06,430 | INFO     | traces error code: 0
[2025-12-02 19:54:06] 2025-12-03 03:54:06,430 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 19:54:06] 2025-12-03 03:54:06,519 [wrapper] ==== pilot stdout END ====
[2025-12-02 19:54:06] 2025-12-03 03:54:06,526 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 19:54:06] 2025-12-03 03:54:06,535 [wrapper] pilotpid: 1752329
[2025-12-02 19:54:06] 2025-12-03 03:54:06,544 [wrapper] Pilot exit status: 0
[2025-12-02 19:54:06] 2025-12-03 03:54:06,571 [wrapper] pandaids: 6899498284
[2025-12-02 19:54:06] 2025-12-03 03:54:06,620 [wrapper] cleanup supervisor_pilot 3198741 1752330
[2025-12-02 19:54:06] 2025-12-03 03:54:06,622 [wrapper] Test setup, not cleaning
[2025-12-02 19:54:06] 2025-12-03 03:54:06,624 [wrapper] apfmon messages muted
[2025-12-02 19:54:06] 2025-12-03 03:54:06,626 [wrapper] ==== wrapper stdout END ====
[2025-12-02 19:54:06] 2025-12-03 03:54:06,627 [wrapper] ==== wrapper stderr END ====
[2025-12-02 19:54:06]  *** Error codes and diagnostics ***
[2025-12-02 19:54:06]     "exeErrorCode": 0,
[2025-12-02 19:54:06]     "exeErrorDiag": "",
[2025-12-02 19:54:06]     "pilotErrorCode": 0,
[2025-12-02 19:54:06]     "pilotErrorDiag": "",
[2025-12-02 19:54:06]  *** Listing of results directory ***
[2025-12-02 19:54:06] total 1329384
[2025-12-02 19:54:06] -rw-r--r-- 1 root root    576529 Nov 27 00:46 pilot3.tar.gz
[2025-12-02 19:54:06] -rwx------ 1 4871 1028     36292 Nov 27 00:46 runpilot2-wrapper.sh
[2025-12-02 19:54:06] -rw-r--r-- 1 root root      5112 Nov 27 00:46 queuedata.json
[2025-12-02 19:54:06] -rw-r--r-- 1 root root       100 Dec  2 02:26 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 19:54:06] -rwxr-xr-x 1 root root      7986 Dec  2 02:26 run_atlas
[2025-12-02 19:54:06] -rw-r--r-- 1 root root       105 Dec  2 02:26 job.xml
[2025-12-02 19:54:06] -rw-r--r-- 1 root root      7065 Dec  2 02:27 init_data.xml
[2025-12-02 19:54:06] -rw-r--r-- 2 root root 410892999 Dec  2 02:27 EVNT.47483658._003354.pool.root.1
[2025-12-02 19:54:06] -rw-r--r-- 2 root root     15847 Dec  2 02:27 start_atlas.sh
[2025-12-02 19:54:06] drwxrwx--x 2 root root      4096 Dec  2 02:27 shared
[2025-12-02 19:54:06] -rw-r--r-- 2 root root    590106 Dec  2 02:27 input.tar.gz
[2025-12-02 19:54:06] -rw-r--r-- 1 root root         0 Dec  2 02:27 boinc_lockfile
[2025-12-02 19:54:06] -rw-r--r-- 1 root root      2787 Dec  2 02:27 pandaJob.out
[2025-12-02 19:54:06] -rw------- 1 root root    986775 Dec  2 02:27 agis_schedconf.cvmfs.json
[2025-12-02 19:54:06] drwxr-xr-x 5  320  320      4096 Dec  2 02:27 pilot3
[2025-12-02 19:54:06] -rw-r--r-- 1 root root       532 Dec  2 19:45 boinc_task_state.xml
[2025-12-02 19:54:06] -rw------- 1 root root 923873374 Dec  2 19:52 HITS.47556173._003107.pool.root.1
[2025-12-02 19:54:06] -rw------- 1 root root      1055 Dec  2 19:52 memory_monitor_summary.json
[2025-12-02 19:54:06] -rw------- 1 root root   1516240 Dec  2 19:52 agis_ddmendpoints.agis.ALL.json
[2025-12-02 19:54:06] -rw------- 1 root root   2386505 Dec  2 19:53 log.47556173._003107.job.log.tgz.1
[2025-12-02 19:54:06] -rw------- 1 root root        95 Dec  2 19:53 pilot_heartbeat.json
[2025-12-02 19:54:06] -rw------- 1 root root      8600 Dec  2 19:53 heartbeat.json
[2025-12-02 19:54:06] -rw-r--r-- 1 root root      8192 Dec  2 19:54 boinc_mmap_file
[2025-12-02 19:54:06] -rw-r--r-- 1 root root        29 Dec  2 19:54 wrapper_checkpoint.txt
[2025-12-02 19:54:06] -rw------- 1 root root      4839 Dec  2 19:54 pilotlog.txt
[2025-12-02 19:54:06] -rw------- 1 root root   8917442 Dec  2 19:54 log.47556173._003107.job.log.1
[2025-12-02 19:54:06] -rw------- 1 root root       353 Dec  2 19:54 output.list
[2025-12-02 19:54:06] -rw-r--r-- 1 root root       620 Dec  2 19:54 runtime_log
[2025-12-02 19:54:06] -rw------- 1 root root  11325440 Dec  2 19:54 result.tar.gz
[2025-12-02 19:54:06] -rw-r--r-- 1 root root      9021 Dec  2 19:54 runtime_log.err
[2025-12-02 19:54:06] -rw------- 1 root root       663 Dec  2 19:54 cdVNDm3omi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmPkNKDmERa8sm.diag
[2025-12-02 19:54:06] -rw-r--r-- 1 root root     21388 Dec  2 19:54 stderr.txt
[2025-12-02 19:54:06] HITS file was successfully produced:
[2025-12-02 19:54:06] -rw------- 1 root root 923873374 Dec  2 19:52 shared/HITS.pool.root.1
[2025-12-02 19:54:06]  *** Contents of shared directory: ***
[2025-12-02 19:54:06] total 1315152
[2025-12-02 19:54:06] -rw-r--r-- 2 root root 410892999 Dec  2 02:27 ATLAS.root_0
[2025-12-02 19:54:06] -rw-r--r-- 2 root root     15847 Dec  2 02:27 start_atlas.sh
[2025-12-02 19:54:06] -rw-r--r-- 2 root root    590106 Dec  2 02:27 input.tar.gz
[2025-12-02 19:54:06] -rw------- 1 root root 923873374 Dec  2 19:52 HITS.pool.root.1
[2025-12-02 19:54:06] -rw------- 1 root root  11325440 Dec  2 19:54 result.tar.gz
19:54:08 (1748470): run_atlas exited; CPU time 138227.184536
19:54:08 (1748470): called boinc_finish(0)

</stderr_txt>
]]>

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