Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:08:41 (11365): wrapper (7.7.26015): starting
16:08:41 (11365): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 16:08:41] Arguments: --nthreads 8
[2025-11-30 16:08:41] Threads: 8
[2025-11-30 16:08:41] Checking for CVMFS
[2025-11-30 16:08:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 16:08:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 16:08:41] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 16:08:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 16:08:41] 2.11.2.0 2880 159678 85960 153493 3 68 13819948 20275200 1 130560 0 62087269 99.972 5888175 22881 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 16:08:41] CVMFS is ok
[2025-11-30 16:08:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 16:08:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 16:08:41] Further information can be found at the LHC@home message board.
[2025-11-30 16:08:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 16:08:41] Checking for apptainer binary...
[2025-11-30 16:08:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 16:08:41] Running /usr/bin/apptainer --version
[2025-11-30 16:08:42] apptainer version 1.3.2-1.el7
[2025-11-30 16:08:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 16:08:43] c-115-10.aglt2.org
[2025-11-30 16:08:43] apptainer works
[2025-11-30 16:08:43] Set ATHENA_PROC_NUMBER=8
[2025-11-30 16:08:43] Set ATHENA_CORE_NUMBER=8
[2025-11-30 16:08:43] Starting ATLAS job with PandaID=6893860233
[2025-11-30 16:08:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 03:19:14]  *** The last 200 lines of the pilot log: ***
[2025-12-01 03:19:14] 2025-12-01 08:18:16,773 | INFO     | time since job start (40156s) is within the limit (172800.0s)
[2025-12-01 03:19:14] 2025-12-01 08:18:17,700 | INFO     | monitor loop #2933: job 0:6893860233 is in state 'finished'
[2025-12-01 03:19:14] 2025-12-01 08:18:17,700 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-01 03:19:14] 2025-12-01 08:18:18,779 | INFO     | time since job start (40158s) is within the limit (172800.0s)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,547 | INFO     | CPU arch script returned: x86-64-v2
[2025-12-01 03:19:14] 2025-12-01 08:18:19,553 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1729.125
[2025-12-01 03:19:14] 2025-12-01 08:18:19,556 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893860233/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,557 | INFO     | extracted standard info from prmon json
[2025-12-01 03:19:14] 2025-12-01 08:18:19,557 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 03:19:14] 2025-12-01 08:18:19,557 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 03:19:14] 2025-12-01 08:18:19,569 | INFO     | fitting pss+swap vs Time
[2025-12-01 03:19:14] 2025-12-01 08:18:19,570 | INFO     | sum of square deviations: 88339629037.40395
[2025-12-01 03:19:14] 2025-12-01 08:18:19,578 | INFO     | sum of deviations: 717070637210.4249
[2025-12-01 03:19:14] 2025-12-01 08:18:19,579 | INFO     | mean x: 1764557011.1489363
[2025-12-01 03:19:14] 2025-12-01 08:18:19,579 | INFO     | mean y: 3229567.179331307
[2025-12-01 03:19:14] 2025-12-01 08:18:19,579 | INFO     | intersect: -14320036606.407883
[2025-12-01 03:19:14] 2025-12-01 08:18:19,580 | INFO     | chi2: 5.881974996071
[2025-12-01 03:19:14] 2025-12-01 08:18:19,580 | INFO     | sum of square deviations: 86341200867.78262
[2025-12-01 03:19:14] 2025-12-01 08:18:19,589 | INFO     | sum of deviations: 954722846457.6932
[2025-12-01 03:19:14] 2025-12-01 08:18:19,589 | INFO     | mean x: 1764556858.6539052
[2025-12-01 03:19:14] 2025-12-01 08:18:19,589 | INFO     | mean y: 3247695.963246554
[2025-12-01 03:19:14] 2025-12-01 08:18:19,589 | INFO     | intersect: -19508442318.752743
[2025-12-01 03:19:14] 2025-12-01 08:18:19,590 | INFO     | chi2: 2.9207640907866588
[2025-12-01 03:19:14] 2025-12-01 08:18:19,590 | INFO     | current chi2=2.9207640907866588 (change=50.343820013895844 %)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,591 | INFO     | sum of square deviations: 84373105649.94449
[2025-12-01 03:19:14] 2025-12-01 08:18:19,598 | INFO     | sum of deviations: 1005380163029.4263
[2025-12-01 03:19:14] 2025-12-01 08:18:19,599 | INFO     | mean x: 1764556706.1574075
[2025-12-01 03:19:14] 2025-12-01 08:18:19,599 | INFO     | mean y: 3251603.1820987654
[2025-12-01 03:19:14] 2025-12-01 08:18:19,599 | INFO     | intersect: -21023001907.878143
[2025-12-01 03:19:14] 2025-12-01 08:18:19,600 | INFO     | chi2: 2.5713582939258917
[2025-12-01 03:19:14] 2025-12-01 08:18:19,600 | INFO     | current chi2=2.5713582939258917 (change=11.962821576824458 %)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,600 | INFO     | right removable region: 647
[2025-12-01 03:19:14] 2025-12-01 08:18:19,601 | INFO     | sum of square deviations: 86340940397.78262
[2025-12-01 03:19:14] 2025-12-01 08:18:19,609 | INFO     | sum of deviations: 509765212692.5185
[2025-12-01 03:19:14] 2025-12-01 08:18:19,609 | INFO     | mean x: 1764557163.6539052
[2025-12-01 03:19:14] 2025-12-01 08:18:19,609 | INFO     | mean y: 3245354.5022970904
[2025-12-01 03:19:14] 2025-12-01 08:18:19,609 | INFO     | intersect: -10414869779.453796
[2025-12-01 03:19:14] 2025-12-01 08:18:19,610 | INFO     | chi2: 3.4759374478499017
[2025-12-01 03:19:14] 2025-12-01 08:18:19,610 | INFO     | current chi2=3.4759374478499017 (change=40.90526651045383 %)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,611 | INFO     | sum of square deviations: 84372664253.94446
[2025-12-01 03:19:14] 2025-12-01 08:18:19,619 | INFO     | sum of deviations: 473448617032.6937
[2025-12-01 03:19:14] 2025-12-01 08:18:19,619 | INFO     | mean x: 1764557316.1574075
[2025-12-01 03:19:14] 2025-12-01 08:18:19,619 | INFO     | mean y: 3248165.8657407407
[2025-12-01 03:19:14] 2025-12-01 08:18:19,619 | INFO     | intersect: -9898385596.64271
[2025-12-01 03:19:14] 2025-12-01 08:18:19,620 | INFO     | chi2: 3.448797813309656
[2025-12-01 03:19:14] 2025-12-01 08:18:19,620 | INFO     | current chi2=3.448797813309656 (change=0.7807860454172837 %)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,620 | INFO     | left removable region: 20
[2025-12-01 03:19:14] 2025-12-01 08:18:19,621 | INFO     | sum of square deviations: 76433002701.66522
[2025-12-01 03:19:14] 2025-12-01 08:18:19,628 | INFO     | sum of deviations: 692823180068.6595
[2025-12-01 03:19:14] 2025-12-01 08:18:19,629 | INFO     | mean x: 1764557285.6650717
[2025-12-01 03:19:14] 2025-12-01 08:18:19,629 | INFO     | mean y: 3276002.326953748
[2025-12-01 03:19:14] 2025-12-01 08:18:19,629 | INFO     | intersect: -15991466410.706131
[2025-12-01 03:19:14] 2025-12-01 08:18:19,629 | INFO     | chi2: 0.07893086354324531
[2025-12-01 03:19:14] 2025-12-01 08:18:19,630 | INFO     | current memory leak: 9.06 B/s (using 627 data points, chi2=0.08)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,630 | INFO     | could have reported an average CPU frequency of 2402 MHz (25 samples)
[2025-12-01 03:19:14] 2025-12-01 08:18:19,630 | INFO     | ..............................
[2025-12-01 03:19:14] 2025-12-01 08:18:19,630 | INFO     | . Timing measurements:
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . get job = 0 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . initial setup = 2 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . payload setup = 8 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . stage-in = 0 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . payload execution = 40117 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . stage-out = 4 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | . log creation = 0 s
[2025-12-01 03:19:14] 2025-12-01 08:18:19,631 | INFO     | ..............................
[2025-12-01 03:19:14] 2025-12-01 08:18:20,041 | INFO     | 
[2025-12-01 03:19:14] 2025-12-01 08:18:20,041 | INFO     | job summary report
[2025-12-01 03:19:14] 2025-12-01 08:18:20,041 | INFO     | --------------------------------------------------
[2025-12-01 03:19:14] 2025-12-01 08:18:20,041 | INFO     | PanDA job id: 6893860233
[2025-12-01 03:19:14] 2025-12-01 08:18:20,042 | INFO     | task id: 47523449
[2025-12-01 03:19:14] 2025-12-01 08:18:20,042 | INFO     | errors: (none)
[2025-12-01 03:19:14] 2025-12-01 08:18:20,042 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 03:19:14] 2025-12-01 08:18:20,042 | INFO     | pilot state: finished 
[2025-12-01 03:19:14] 2025-12-01 08:18:20,042 | INFO     | transexitcode: 0
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | exeerrorcode: 0
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | exeerrordiag: 
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | exitcode: 0
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | exitmsg: OK
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | cpuconsumptiontime: 312859 s
[2025-12-01 03:19:14] 2025-12-01 08:18:20,043 | INFO     | nevents: 1000
[2025-12-01 03:19:14] 2025-12-01 08:18:20,044 | INFO     | neventsw: 0
[2025-12-01 03:19:14] 2025-12-01 08:18:20,044 | INFO     | pid: 22135
[2025-12-01 03:19:14] 2025-12-01 08:18:20,044 | INFO     | pgrp: 22135
[2025-12-01 03:19:14] 2025-12-01 08:18:20,044 | INFO     | corecount: 8
[2025-12-01 03:19:14] 2025-12-01 08:18:20,044 | INFO     | event service: False
[2025-12-01 03:19:14] 2025-12-01 08:18:20,045 | INFO     | sizes: {0: 2284144, 1: 2284343, 6: 2284605, 11: 2284633, 40130: 2328167, 40135: 2337345, 40142: 2337599}
[2025-12-01 03:19:14] 2025-12-01 08:18:20,045 | INFO     | --------------------------------------------------
[2025-12-01 03:19:14] 2025-12-01 08:18:20,045 | INFO     | 
[2025-12-01 03:19:14] 2025-12-01 08:18:20,045 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-12-01 03:19:14] 2025-12-01 08:18:20,073 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,074 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,074 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,074 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,074 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,075 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,075 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,075 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,075 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,075 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,076 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,077 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,077 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 03:19:14] 2025-12-01 08:18:20,077 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,077 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 03:19:14] 2025-12-01 08:18:20,077 | INFO     | job 6893860233 has completed (purged errors)
[2025-12-01 03:19:14] 2025-12-01 08:18:20,078 | INFO     | overall cleanup function is called
[2025-12-01 03:19:14] 2025-12-01 08:18:21,093 | INFO     | --- collectZombieJob: --- 10, [22135]
[2025-12-01 03:19:14] 2025-12-01 08:18:21,093 | INFO     | zombie collector waiting for pid 22135
[2025-12-01 03:19:14] 2025-12-01 08:18:21,095 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 03:19:14] 2025-12-01 08:18:21,095 | INFO     | collected zombie processes
[2025-12-01 03:19:14] 2025-12-01 08:18:21,095 | INFO     | will attempt to kill all subprocesses of pid=22135
[2025-12-01 03:19:14] 2025-12-01 08:18:21,182 | INFO     | process IDs to be killed: [22135] (in reverse order)
[2025-12-01 03:19:14] 2025-12-01 08:18:21,239 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 03:19:14] 2025-12-01 08:18:21,240 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 03:19:14] 2025-12-01 08:18:21,244 | INFO     | did not find any defunct processes belonging to 22135
[2025-12-01 03:19:14] 2025-12-01 08:18:21,248 | INFO     | did not find any defunct processes belonging to 22135
[2025-12-01 03:19:14] 2025-12-01 08:18:21,250 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 03:19:14] 2025-12-01 08:18:21,251 | INFO     | ready for new job
[2025-12-01 03:19:14] 2025-12-01 08:18:21,251 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 03:19:14] 2025-12-01 08:18:21,254 | INFO     | ***************************************
[2025-12-01 03:19:14] 2025-12-01 08:18:21,255 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 03:19:14] 2025-12-01 08:18:21,255 | INFO     | ***************************************
[2025-12-01 03:19:14] 2025-12-01 08:18:21,255 | INFO     | 
[2025-12-01 03:19:14] 2025-12-01 08:18:21,255 | INFO     | architecture information:
[2025-12-01 03:19:14] 2025-12-01 08:18:21,256 | INFO     | executing command: cat /etc/os-release
[2025-12-01 03:19:14] 2025-12-01 08:18:21,275 | INFO     | cat /etc/os-release:
[2025-12-01 03:19:14] NAME="CentOS Linux"
[2025-12-01 03:19:14] VERSION="7 (Core)"
[2025-12-01 03:19:14] ID="centos"
[2025-12-01 03:19:14] ID_LIKE="rhel fedora"
[2025-12-01 03:19:14] VERSION_ID="7"
[2025-12-01 03:19:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 03:19:14] ANSI_COLOR="0;31"
[2025-12-01 03:19:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 03:19:14] HOME_URL="https://www.centos.org/"
[2025-12-01 03:19:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 03:19:14] 
[2025-12-01 03:19:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 03:19:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 03:19:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 03:19:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 03:19:14] 
[2025-12-01 03:19:14] 2025-12-01 08:18:21,275 | INFO     | ***************************************
[2025-12-01 03:19:14] 2025-12-01 08:18:21,778 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-12-01 03:19:14] 2025-12-01 08:18:21,800 | INFO     | sufficient remaining disk space (17478713344 B)
[2025-12-01 03:19:14] 2025-12-01 08:18:21,801 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 03:19:14] 2025-12-01 08:18:21,801 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 03:19:14] 2025-12-01 08:18:21,801 | INFO     | update_server=False
[2025-12-01 03:19:14] 2025-12-01 08:18:21,802 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 03:19:14] 2025-12-01 08:18:21,802 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 03:19:14] 2025-12-01 08:18:21,803 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 03:19:14] 2025-12-01 08:18:21,803 | INFO     | aborting loop
[2025-12-01 03:19:14] 2025-12-01 08:18:21,815 | INFO     | all payload control threads have been joined
[2025-12-01 03:19:14] 2025-12-01 08:18:22,195 | INFO     | all job control threads have been joined
[2025-12-01 03:19:14] 2025-12-01 08:18:22,322 | INFO     | all data control threads have been joined
[2025-12-01 03:19:14] 2025-12-01 08:18:22,807 | INFO     | [job] retrieve thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:22,808 | INFO     | [job] job monitor thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:22,821 | INFO     | [payload] control thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:22,881 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,027 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,133 | INFO     | [payload] validate_post thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,201 | INFO     | [job] control thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,327 | INFO     | [data] control thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,426 | INFO     | [payload] failed_post thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,513 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 03:19:14] 2025-12-01 08:18:23,514 | INFO     | [data] copytool_in thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,516 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,655 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:23,808 | INFO     | [data] copytool_out thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:24,137 | INFO     | [job] validate thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:24,727 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 03:19:14] 2025-12-01 08:18:25,732 | INFO     | [job] queue monitor thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:27,517 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 03:19:14] 2025-12-01 08:18:51,986 | INFO     | PID=15143 has CPU usage=5.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 03:19:14] 2025-12-01 08:18:51,987 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 03:19:14] 2025-12-01 08:18:51,987 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 03:19:14] 2025-12-01 08:18:51,987 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 03:19:14] 2025-12-01 08:19:07,085 | INFO     | [monitor] cgroup control has ended
[2025-12-01 03:19:14] 2025-12-01 08:19:08,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140380445337408)>', '<ExcThread(monitor, started 140379194128128)>']
[2025-12-01 03:19:14] 2025-12-01 08:19:09,056 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 03:19:14] 2025-12-01 08:19:09,056 | INFO     | [monitor] control thread has ended
[2025-12-01 03:19:14] 2025-12-01 08:19:13,669 | INFO     | all workflow threads have been joined
[2025-12-01 03:19:14] 2025-12-01 08:19:13,669 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 03:19:14] 2025-12-01 08:19:13,670 | INFO     | traces error code: 0
[2025-12-01 03:19:14] 2025-12-01 08:19:13,670 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 03:19:14] 2025-12-01 08:19:13,770 [wrapper] ==== pilot stdout END ====
[2025-12-01 03:19:14] 2025-12-01 08:19:13,775 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 03:19:14] 2025-12-01 08:19:13,779 [wrapper] pilotpid: 15143
[2025-12-01 03:19:14] 2025-12-01 08:19:13,784 [wrapper] Pilot exit status: 0
[2025-12-01 03:19:14] 2025-12-01 08:19:13,800 [wrapper] pandaids: 6893860233
[2025-12-01 03:19:14] 2025-12-01 08:19:13,856 [wrapper] cleanup supervisor_pilot 32138 15144
[2025-12-01 03:19:14] 2025-12-01 08:19:13,861 [wrapper] Test setup, not cleaning
[2025-12-01 03:19:14] 2025-12-01 08:19:13,866 [wrapper] apfmon messages muted
[2025-12-01 03:19:14] 2025-12-01 08:19:13,870 [wrapper] ==== wrapper stdout END ====
[2025-12-01 03:19:14] 2025-12-01 08:19:13,875 [wrapper] ==== wrapper stderr END ====
[2025-12-01 03:19:14]  *** Error codes and diagnostics ***
[2025-12-01 03:19:14]     "exeErrorCode": 0,
[2025-12-01 03:19:14]     "exeErrorDiag": "",
[2025-12-01 03:19:14]     "pilotErrorCode": 0,
[2025-12-01 03:19:14]     "pilotErrorDiag": "",
[2025-12-01 03:19:14]  *** Listing of results directory ***
[2025-12-01 03:19:14] total 1308140
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 08:12 pilot3.tar.gz
[2025-12-01 03:19:14] -rwx------ 1 boincer umatlas     36292 Nov 20 08:45 runpilot2-wrapper.sh
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 08:45 queuedata.json
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas       100 Nov 30 16:08 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 03:19:14] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 16:08 run_atlas
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas       105 Nov 30 16:08 job.xml
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas 407367642 Nov 30 16:08 EVNT.47493127._000551.pool.root.1
[2025-12-01 03:19:14] drwxrwx--x 2 boincer umatlas      4096 Nov 30 16:08 shared
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas    590103 Nov 30 16:08 input.tar.gz
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 16:08 start_atlas.sh
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas         0 Nov 30 16:08 boinc_lockfile
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas      2786 Nov 30 16:08 pandaJob.out
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas        57 Nov 30 16:08 setup.sh.local
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas    993245 Nov 30 16:08 agis_schedconf.cvmfs.json
[2025-12-01 03:19:14] drwx------ 5 boincer umatlas      4096 Nov 30 16:09 pilot3
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas      5913 Dec  1 03:09 init_data.xml
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas       533 Dec  1 03:09 boinc_task_state.xml
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas 913329364 Dec  1 03:17 HITS.47523449._005504.pool.root.1
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas      1064 Dec  1 03:18 memory_monitor_summary.json
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas   1516240 Dec  1 03:18 agis_ddmendpoints.agis.ALL.json
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas   1925401 Dec  1 03:18 log.47523449._005504.job.log.tgz.1
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas      8660 Dec  1 03:18 heartbeat.json
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas        95 Dec  1 03:18 pilot_heartbeat.json
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas      8192 Dec  1 03:19 boinc_mmap_file
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas        29 Dec  1 03:19 wrapper_checkpoint.txt
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas      4746 Dec  1 03:19 pilotlog.txt
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas   5534497 Dec  1 03:19 log.47523449._005504.job.log.1
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas       353 Dec  1 03:19 output.list
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas       620 Dec  1 03:19 runtime_log
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas   7475200 Dec  1 03:19 result.tar.gz
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas      9343 Dec  1 03:19 runtime_log.err
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas       667 Dec  1 03:19 n4VLDmN9Jg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmTzHKDmRSH6No.diag
[2025-12-01 03:19:14] -rw-r--r-- 1 boincer umatlas     21299 Dec  1 03:19 stderr.txt
[2025-12-01 03:19:14] HITS file was successfully produced:
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas 913329364 Dec  1 03:17 shared/HITS.pool.root.1
[2025-12-01 03:19:14]  *** Contents of shared directory: ***
[2025-12-01 03:19:14] total 1297648
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas 407367642 Nov 30 16:08 ATLAS.root_0
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas    590103 Nov 30 16:08 input.tar.gz
[2025-12-01 03:19:14] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 16:08 start_atlas.sh
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas 913329364 Dec  1 03:17 HITS.pool.root.1
[2025-12-01 03:19:14] -rw------- 1 boincer umatlas   7475200 Dec  1 03:19 result.tar.gz
03:19:15 (11365): run_atlas exited; CPU time 311154.567464
03:19:15 (11365): called boinc_finish(0)

</stderr_txt>
]]>

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