Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
02:30:09 (1788767): wrapper (7.7.26015): starting
02:30:09 (1788767): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 02:30:09] Arguments: --nthreads 10
[2025-12-02 02:30:09] Threads: 10
[2025-12-02 02:30:09] Checking for CVMFS
[2025-12-02 02:30:10] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 02:30:10] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 02:30:10] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 02:30:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 02:30:10] 2.13.3.0 4125 1130 63716 153552 3 110 2083948 4096001 11826 130560 0 172724743 99.999 268603 736 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-02 02:30:10] CVMFS is ok
[2025-12-02 02:30:10] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 02:30:10] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 02:30:10] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 02:30:10] Further information can be found at the LHC@home message board.
[2025-12-02 02:30:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 02:30:10] Checking for apptainer binary...
[2025-12-02 02:30:10] apptainer is not installed, using version from CVMFS
[2025-12-02 02:30:10] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 02:30:10] 7950x-linux
[2025-12-02 02:30:10] apptainer works
[2025-12-02 02:30:10] Set ATHENA_PROC_NUMBER=10
[2025-12-02 02:30:10] Set ATHENA_CORE_NUMBER=10
[2025-12-02 02:30:10] Starting ATLAS job with PandaID=6900759090
[2025-12-02 02:30:10] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc523/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 19:47:14]  *** The last 200 lines of the pilot log: ***
[2025-12-02 19:47:14] 2025-12-03 03:46:25,283 | INFO     | PID=1792630 has CPU usage=8.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 19:47:14] 2025-12-03 03:46:25,283 | INFO     | .. there are 14 such processes running
[2025-12-02 19:47:14] 2025-12-03 03:46:26,283 | INFO     | time since job start (62162s) is within the limit (172800.0s)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,060 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 19:47:14] 2025-12-03 03:46:27,063 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.13096875
[2025-12-02 19:47:14] 2025-12-03 03:46:27,066 | INFO     | using path: /var/lib/multiboinc/boinc523/slots/1/PanDA_Pilot-6900759090/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,066 | INFO     | extracted standard info from prmon json
[2025-12-02 19:47:14] 2025-12-03 03:46:27,066 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 19:47:14] 2025-12-03 03:46:27,067 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 19:47:14] 2025-12-03 03:46:27,074 | INFO     | fitting pss+swap vs Time
[2025-12-02 19:47:14] 2025-12-03 03:46:27,075 | INFO     | sum of square deviations: 328095714470.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,087 | INFO     | sum of deviations: 2304189385219.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,087 | INFO     | mean x: 1764702503.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,087 | INFO     | mean y: 3156044.613346418
[2025-12-02 19:47:14] 2025-12-03 03:46:27,087 | INFO     | intersect: -12390205392.766237
[2025-12-02 19:47:14] 2025-12-03 03:46:27,088 | INFO     | chi2: 5.192109017810218
[2025-12-02 19:47:14] 2025-12-03 03:46:27,088 | INFO     | sum of square deviations: 323289698777.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,100 | INFO     | sum of deviations: 2636244476343.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,101 | INFO     | mean x: 1764702350.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,101 | INFO     | mean y: 3166571.7928994084
[2025-12-02 19:47:14] 2025-12-03 03:46:27,101 | INFO     | intersect: -14386982082.76396
[2025-12-02 19:47:14] 2025-12-03 03:46:27,101 | INFO     | chi2: 2.4613400633823255
[2025-12-02 19:47:14] 2025-12-03 03:46:27,101 | INFO     | current chi2=2.4613400633823255 (change=52.5945997100731 %)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,105 | INFO     | sum of square deviations: 318530846760.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,116 | INFO     | sum of deviations: 2670197894719.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,116 | INFO     | mean x: 1764702198.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,116 | INFO     | mean y: 3167653.939544103
[2025-12-02 19:47:14] 2025-12-03 03:46:27,116 | INFO     | intersect: -14790074952.971836
[2025-12-02 19:47:14] 2025-12-03 03:46:27,116 | INFO     | chi2: 2.271987257338799
[2025-12-02 19:47:14] 2025-12-03 03:46:27,117 | INFO     | current chi2=2.271987257338799 (change=7.693077801826442 %)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,117 | INFO     | right removable region: 1008
[2025-12-02 19:47:14] 2025-12-03 03:46:27,117 | INFO     | sum of square deviations: 323289698777.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,132 | INFO     | sum of deviations: 2028686071249.0005
[2025-12-02 19:47:14] 2025-12-03 03:46:27,132 | INFO     | mean x: 1764702655.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,132 | INFO     | mean y: 3164774.0512820515
[2025-12-02 19:47:14] 2025-12-03 03:46:27,132 | INFO     | intersect: -11070580262.201424
[2025-12-02 19:47:14] 2025-12-03 03:46:27,133 | INFO     | chi2: 3.2851021612590667
[2025-12-02 19:47:14] 2025-12-03 03:46:27,133 | INFO     | current chi2=3.2851021612590667 (change=36.72894482780785 %)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,134 | INFO     | sum of square deviations: 318530846760.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,144 | INFO     | sum of deviations: 1932788421917.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | mean x: 1764702808.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | mean y: 3167846.5659068385
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | intersect: -10704734355.435633
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | chi2: 3.1882497061158546
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | current chi2=3.1882497061158546 (change=2.9482326694550025 %)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,145 | INFO     | left removable region: 20
[2025-12-02 19:47:14] 2025-12-03 03:46:27,146 | INFO     | sum of square deviations: 299053447147.0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,156 | INFO     | sum of deviations: 2156830885417.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,160 | INFO     | mean x: 1764702777.5
[2025-12-02 19:47:14] 2025-12-03 03:46:27,160 | INFO     | mean y: 3184091.306680162
[2025-12-02 19:47:14] 2025-12-03 03:46:27,160 | INFO     | intersect: -12724191200.318438
[2025-12-02 19:47:14] 2025-12-03 03:46:27,160 | INFO     | chi2: 0.19568388261497055
[2025-12-02 19:47:14] 2025-12-03 03:46:27,160 | INFO     | current memory leak: 7.21 B/s (using 988 data points, chi2=0.20)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | could have reported an average CPU frequency of 4000 MHz (38 samples)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | ..............................
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . Timing measurements:
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . get job = 0 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . initial setup = 3 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . payload setup = 6 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . stage-in = 0 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . payload execution = 62119 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . stage-out = 3 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | . log creation = 0 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,161 | INFO     | ..............................
[2025-12-02 19:47:14] 2025-12-03 03:46:27,214 | INFO     | 
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | job summary report
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | --------------------------------------------------
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | PanDA job id: 6900759090
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | task id: 47556173
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | errors: (none)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | pilot state: finished 
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | transexitcode: 0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | exeerrorcode: 0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | exeerrordiag: 
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | exitcode: 0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | exitmsg: OK
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | cpuconsumptiontime: 136592 s
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | nevents: 1000
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | neventsw: 0
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | pid: 1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | pgrp: 1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | corecount: 10
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | event service: False
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | sizes: {0: 2284154, 1: 2284353, 6: 2284615, 11: 2284643, 62129: 2337848, 62134: 2346870, 62138: 2347054, 62146: 2347300}
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | --------------------------------------------------
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | 
[2025-12-02 19:47:14] 2025-12-03 03:46:27,215 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc523/slots/1
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,250 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | job 6900759090 has completed (purged errors)
[2025-12-02 19:47:14] 2025-12-03 03:46:27,251 | INFO     | overall cleanup function is called
[2025-12-02 19:47:14] 2025-12-03 03:46:28,265 | INFO     | --- collectZombieJob: --- 10, [1799361]
[2025-12-02 19:47:14] 2025-12-03 03:46:28,265 | INFO     | zombie collector waiting for pid 1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:28,265 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 19:47:14] 2025-12-03 03:46:28,265 | INFO     | collected zombie processes
[2025-12-02 19:47:14] 2025-12-03 03:46:28,265 | INFO     | will attempt to kill all subprocesses of pid=1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:28,640 | INFO     | process IDs to be killed: [1799361] (in reverse order)
[2025-12-02 19:47:14] 2025-12-03 03:46:28,798 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 19:47:14] 2025-12-03 03:46:28,798 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 19:47:14] 2025-12-03 03:46:28,804 | INFO     | did not find any defunct processes belonging to 1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:28,809 | INFO     | did not find any defunct processes belonging to 1799361
[2025-12-02 19:47:14] 2025-12-03 03:46:28,810 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 19:47:14] 2025-12-03 03:46:28,810 | INFO     | ready for new job
[2025-12-02 19:47:14] 2025-12-03 03:46:28,810 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 19:47:14] 2025-12-03 03:46:28,812 | INFO     | ***************************************
[2025-12-02 19:47:14] 2025-12-03 03:46:28,812 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 19:47:14] 2025-12-03 03:46:28,813 | INFO     | ***************************************
[2025-12-02 19:47:14] 2025-12-03 03:46:28,813 | INFO     | 
[2025-12-02 19:47:14] 2025-12-03 03:46:28,814 | INFO     | architecture information:
[2025-12-02 19:47:14] 2025-12-03 03:46:28,814 | INFO     | executing command: cat /etc/os-release
[2025-12-02 19:47:14] 2025-12-03 03:46:28,828 | INFO     | cat /etc/os-release:
[2025-12-02 19:47:14] NAME="CentOS Linux"
[2025-12-02 19:47:14] VERSION="7 (Core)"
[2025-12-02 19:47:14] ID="centos"
[2025-12-02 19:47:14] ID_LIKE="rhel fedora"
[2025-12-02 19:47:14] VERSION_ID="7"
[2025-12-02 19:47:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 19:47:14] ANSI_COLOR="0;31"
[2025-12-02 19:47:14] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 19:47:14] HOME_URL="https://www.centos.org/"
[2025-12-02 19:47:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 19:47:14] 
[2025-12-02 19:47:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 19:47:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 19:47:14] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 19:47:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 19:47:14] 
[2025-12-02 19:47:14] 2025-12-03 03:46:28,828 | INFO     | ***************************************
[2025-12-02 19:47:14] 2025-12-03 03:46:29,330 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc523/slots/1
[2025-12-02 19:47:14] 2025-12-03 03:46:29,350 | INFO     | sufficient remaining disk space (160145866752 B)
[2025-12-02 19:47:14] 2025-12-03 03:46:29,350 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 19:47:14] 2025-12-03 03:46:29,350 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 19:47:14] 2025-12-03 03:46:29,350 | INFO     | update_server=False
[2025-12-02 19:47:14] 2025-12-03 03:46:29,350 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 19:47:14] 2025-12-03 03:46:29,351 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 19:47:14] 2025-12-03 03:46:29,351 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 19:47:14] 2025-12-03 03:46:29,351 | INFO     | aborting loop
[2025-12-02 19:47:14] 2025-12-03 03:46:29,518 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 19:47:14] 2025-12-03 03:46:30,355 | INFO     | [job] retrieve thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:30,356 | INFO     | [job] job monitor thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:30,403 | INFO     | [data] copytool_in thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:30,451 | INFO     | all data control threads have been joined
[2025-12-02 19:47:14] 2025-12-03 03:46:30,474 | INFO     | all job control threads have been joined
[2025-12-02 19:47:14] 2025-12-03 03:46:30,531 | INFO     | all payload control threads have been joined
[2025-12-02 19:47:14] 2025-12-03 03:46:30,635 | INFO     | [job] validate thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:30,855 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,017 | INFO     | [payload] validate_post thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,356 | INFO     | [data] copytool_out thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,456 | INFO     | [data] control thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,479 | INFO     | [job] control thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,520 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,536 | INFO     | [payload] control thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,676 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,724 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:31,737 | INFO     | [payload] failed_post thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:32,224 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 19:47:14] 2025-12-03 03:46:33,229 | INFO     | [job] queue monitor thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:33,523 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 19:47:14] 2025-12-03 03:46:59,698 | INFO     | PID=1792630 has CPU usage=1.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 19:47:14] 2025-12-03 03:46:59,698 | INFO     | .. there are 14 such processes running
[2025-12-02 19:47:14] 2025-12-03 03:46:59,698 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 19:47:14] 2025-12-03 03:46:59,698 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 19:47:14] 2025-12-03 03:46:59,698 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 19:47:14] 2025-12-03 03:47:07,526 | INFO     | [monitor] cgroup control has ended
[2025-12-02 19:47:14] 2025-12-03 03:47:09,443 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 125436876535616)>', '<ExcThread(monitor, started 125436222744320)>']
[2025-12-02 19:47:14] 2025-12-03 03:47:09,748 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 19:47:14] 2025-12-03 03:47:09,748 | INFO     | [monitor] control thread has ended
[2025-12-02 19:47:14] 2025-12-03 03:47:14,468 | INFO     | all workflow threads have been joined
[2025-12-02 19:47:14] 2025-12-03 03:47:14,468 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 19:47:14] 2025-12-03 03:47:14,468 | INFO     | traces error code: 0
[2025-12-02 19:47:14] 2025-12-03 03:47:14,468 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 19:47:14] 2025-12-03 03:47:14,563 [wrapper] ==== pilot stdout END ====
[2025-12-02 19:47:14] 2025-12-03 03:47:14,567 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 19:47:14] 2025-12-03 03:47:14,576 [wrapper] pilotpid: 1792630
[2025-12-02 19:47:14] 2025-12-03 03:47:14,584 [wrapper] Pilot exit status: 0
[2025-12-02 19:47:14] 2025-12-03 03:47:14,612 [wrapper] pandaids: 6900759090
[2025-12-02 19:47:14] 2025-12-03 03:47:14,660 [wrapper] cleanup supervisor_pilot 3201259 1792631
[2025-12-02 19:47:14] 2025-12-03 03:47:14,667 [wrapper] Test setup, not cleaning
[2025-12-02 19:47:14] 2025-12-03 03:47:14,672 [wrapper] apfmon messages muted
[2025-12-02 19:47:14] 2025-12-03 03:47:14,674 [wrapper] ==== wrapper stdout END ====
[2025-12-02 19:47:14] 2025-12-03 03:47:14,675 [wrapper] ==== wrapper stderr END ====
[2025-12-02 19:47:14]  *** Error codes and diagnostics ***
[2025-12-02 19:47:14]     "exeErrorCode": 0,
[2025-12-02 19:47:14]     "exeErrorDiag": "",
[2025-12-02 19:47:14]     "pilotErrorCode": 0,
[2025-12-02 19:47:14]     "pilotErrorDiag": "",
[2025-12-02 19:47:14]  *** Listing of results directory ***
[2025-12-02 19:47:14] total 1327396
[2025-12-02 19:47:14] -rw-r--r-- 1 root root    576529 Nov 27 16:58 pilot3.tar.gz
[2025-12-02 19:47:14] -rw-r--r-- 1 root root      5112 Nov 27 16:59 queuedata.json
[2025-12-02 19:47:14] -rwx------ 1 4871 1028     36292 Nov 27 16:59 runpilot2-wrapper.sh
[2025-12-02 19:47:14] -rw-r--r-- 1 root root       100 Dec  2 02:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 19:47:14] -rwxr-xr-x 1 root root      7986 Dec  2 02:30 run_atlas
[2025-12-02 19:47:14] -rw-r--r-- 1 root root       105 Dec  2 02:30 job.xml
[2025-12-02 19:47:14] -rw-r--r-- 2 root root 409153903 Dec  2 02:30 EVNT.47483658._003479.pool.root.1
[2025-12-02 19:47:14] -rw-r--r-- 1 root root      7072 Dec  2 02:30 init_data.xml
[2025-12-02 19:47:14] -rw-r--r-- 2 root root     15847 Dec  2 02:30 start_atlas.sh
[2025-12-02 19:47:14] drwxrwx--x 2 root root      4096 Dec  2 02:30 shared
[2025-12-02 19:47:14] -rw-r--r-- 2 root root    590105 Dec  2 02:30 input.tar.gz
[2025-12-02 19:47:14] -rw-r--r-- 1 root root         0 Dec  2 02:30 boinc_lockfile
[2025-12-02 19:47:14] -rw-r--r-- 1 root root      2785 Dec  2 02:30 pandaJob.out
[2025-12-02 19:47:14] -rw------- 1 root root    986775 Dec  2 02:30 agis_schedconf.cvmfs.json
[2025-12-02 19:47:14] drwxr-xr-x 5  320  320      4096 Dec  2 02:30 pilot3
[2025-12-02 19:47:14] -rw-r--r-- 1 root root       533 Dec  2 19:38 boinc_task_state.xml
[2025-12-02 19:47:14] -rw------- 1 root root 923777236 Dec  2 19:45 HITS.47556173._004351.pool.root.1
[2025-12-02 19:47:14] -rw------- 1 root root      1055 Dec  2 19:46 memory_monitor_summary.json
[2025-12-02 19:47:14] -rw------- 1 root root   1516240 Dec  2 19:46 agis_ddmendpoints.agis.ALL.json
[2025-12-02 19:47:14] -rw------- 1 root root        95 Dec  2 19:46 pilot_heartbeat.json
[2025-12-02 19:47:14] -rw------- 1 root root   2373258 Dec  2 19:46 log.47556173._004351.job.log.tgz.1
[2025-12-02 19:47:14] -rw------- 1 root root      8600 Dec  2 19:46 heartbeat.json
[2025-12-02 19:47:14] -rw------- 1 root root      4839 Dec  2 19:47 pilotlog.txt
[2025-12-02 19:47:14] -rw-r--r-- 1 root root      8192 Dec  2 19:47 boinc_mmap_file
[2025-12-02 19:47:14] -rw------- 1 root root   8831333 Dec  2 19:47 log.47556173._004351.job.log.1
[2025-12-02 19:47:14] -rw------- 1 root root       353 Dec  2 19:47 output.list
[2025-12-02 19:47:14] -rw-r--r-- 1 root root       620 Dec  2 19:47 runtime_log
[2025-12-02 19:47:14] -rw------- 1 root root  11223040 Dec  2 19:47 result.tar.gz
[2025-12-02 19:47:14] -rw-r--r-- 1 root root      9021 Dec  2 19:47 runtime_log.err
[2025-12-02 19:47:14] -rw------- 1 root root       663 Dec  2 19:47 FTgNDma01i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmz8NKDmE8HWzn.diag
[2025-12-02 19:47:14] -rw-r--r-- 1 root root        29 Dec  2 19:47 wrapper_checkpoint.txt
[2025-12-02 19:47:14] -rw-r--r-- 1 root root     21474 Dec  2 19:47 stderr.txt
[2025-12-02 19:47:14] HITS file was successfully produced:
[2025-12-02 19:47:14] -rw------- 1 root root 923777236 Dec  2 19:45 shared/HITS.pool.root.1
[2025-12-02 19:47:14]  *** Contents of shared directory: ***
[2025-12-02 19:47:14] total 1313260
[2025-12-02 19:47:14] -rw-r--r-- 2 root root 409153903 Dec  2 02:30 ATLAS.root_0
[2025-12-02 19:47:14] -rw-r--r-- 2 root root     15847 Dec  2 02:30 start_atlas.sh
[2025-12-02 19:47:14] -rw-r--r-- 2 root root    590105 Dec  2 02:30 input.tar.gz
[2025-12-02 19:47:14] -rw------- 1 root root 923777236 Dec  2 19:45 HITS.pool.root.1
[2025-12-02 19:47:14] -rw------- 1 root root  11223040 Dec  2 19:47 result.tar.gz
19:47:16 (1788767): run_atlas exited; CPU time 136970.980121
19:47:16 (1788767): called boinc_finish(0)

</stderr_txt>
]]>

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