Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
08:34:49 (236606): wrapper (7.7.26015): starting
08:34:49 (236606): wrapper: running run_atlas (--nthreads 10)
[2025-12-01 08:34:49] Arguments: --nthreads 10
[2025-12-01 08:34:49] Threads: 10
[2025-12-01 08:34:49] Checking for CVMFS
[2025-12-01 08:34:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 08:34:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 08:34:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 08:34:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 08:34:50] 2.13.3.0 4125 55 61472 153525 0 111 3947970 4096000 10703 130560 0 3311125 99.947 229748 755 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-01 08:34:50] CVMFS is ok
[2025-12-01 08:34:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-01 08:34:50] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-01 08:34:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-01 08:34:50] Further information can be found at the LHC@home message board.
[2025-12-01 08:34:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 08:34:50] Checking for apptainer binary...
[2025-12-01 08:34:50] apptainer is not installed, using version from CVMFS
[2025-12-01 08:34:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 08:34:51] 7950x-linux
[2025-12-01 08:34:51] apptainer works
[2025-12-01 08:34:51] Set ATHENA_PROC_NUMBER=10
[2025-12-01 08:34:51] Set ATHENA_CORE_NUMBER=10
[2025-12-01 08:34:51] Starting ATLAS job with PandaID=6893854961
[2025-12-01 08:34:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc523/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 02:30:03]  *** The last 200 lines of the pilot log: ***
[2025-12-02 02:30:03] 2025-12-02 10:29:15,590 | INFO     | time since job start (64446s) is within the limit (172800.0s)
[2025-12-02 02:30:03] 2025-12-02 10:29:16,641 | INFO     | monitor loop #4669: job 0:6893854961 is in state 'finished'
[2025-12-02 02:30:03] 2025-12-02 10:29:16,641 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,121 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-02 02:30:03] 2025-12-02 10:29:17,124 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.1182500000004
[2025-12-02 02:30:03] 2025-12-02 10:29:17,127 | INFO     | using path: /var/lib/multiboinc/boinc523/slots/1/PanDA_Pilot-6893854961/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,128 | INFO     | extracted standard info from prmon json
[2025-12-02 02:30:03] 2025-12-02 10:29:17,128 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 02:30:03] 2025-12-02 10:29:17,128 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 02:30:03] 2025-12-02 10:29:17,136 | INFO     | fitting pss+swap vs Time
[2025-12-02 02:30:03] 2025-12-02 10:29:17,137 | INFO     | sum of square deviations: 365148725480.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,149 | INFO     | sum of deviations: 2733953778644.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,149 | INFO     | mean x: 1764639113.5
[2025-12-02 02:30:03] 2025-12-02 10:29:17,149 | INFO     | mean y: 3155503.0625
[2025-12-02 02:30:03] 2025-12-02 10:29:17,149 | INFO     | intersect: -13209109625.22033
[2025-12-02 02:30:03] 2025-12-02 10:29:17,150 | INFO     | chi2: 4.895031594560452
[2025-12-02 02:30:03] 2025-12-02 10:29:17,150 | INFO     | sum of square deviations: 359986470550.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,162 | INFO     | sum of deviations: 2997426961570.9995
[2025-12-02 02:30:03] 2025-12-02 10:29:17,163 | INFO     | mean x: 1764638961.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,163 | INFO     | mean y: 3163277.64605138
[2025-12-02 02:30:03] 2025-12-02 10:29:17,163 | INFO     | intersect: -14690101141.593761
[2025-12-02 02:30:03] 2025-12-02 10:29:17,163 | INFO     | chi2: 3.1159514145817537
[2025-12-02 02:30:03] 2025-12-02 10:29:17,163 | INFO     | current chi2=3.1159514145817537 (change=36.34461076728658 %)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,164 | INFO     | sum of square deviations: 354873100257.5
[2025-12-02 02:30:03] 2025-12-02 10:29:17,176 | INFO     | sum of deviations: 3014304569457.501
[2025-12-02 02:30:03] 2025-12-02 10:29:17,176 | INFO     | mean x: 1764638808.5
[2025-12-02 02:30:03] 2025-12-02 10:29:17,176 | INFO     | mean y: 3163778.7466539196
[2025-12-02 02:30:03] 2025-12-02 10:29:17,176 | INFO     | intersect: -14985740198.60172
[2025-12-02 02:30:03] 2025-12-02 10:29:17,176 | INFO     | chi2: 3.0446118490570866
[2025-12-02 02:30:03] 2025-12-02 10:29:17,177 | INFO     | current chi2=3.0446118490570866 (change=2.289495439204172 %)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,177 | INFO     | right removable region: 1045
[2025-12-02 02:30:03] 2025-12-02 10:29:17,177 | INFO     | sum of square deviations: 359986470550.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,191 | INFO     | sum of deviations: 2387496336261.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,191 | INFO     | mean x: 1764639266.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,191 | INFO     | mean y: 3165728.476688868
[2025-12-02 02:30:03] 2025-12-02 10:29:17,191 | INFO     | intersect: -11700245724.627157
[2025-12-02 02:30:03] 2025-12-02 10:29:17,192 | INFO     | chi2: 2.3804635579805424
[2025-12-02 02:30:03] 2025-12-02 10:29:17,192 | INFO     | current chi2=2.3804635579805424 (change=51.369801971742014 %)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,192 | INFO     | sum of square deviations: 354873100257.5
[2025-12-02 02:30:03] 2025-12-02 10:29:17,204 | INFO     | sum of deviations: 2275423373903.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,204 | INFO     | mean x: 1764639418.5
[2025-12-02 02:30:03] 2025-12-02 10:29:17,204 | INFO     | mean y: 3169070.5621414916
[2025-12-02 02:30:03] 2025-12-02 10:29:17,205 | INFO     | intersect: -11311584784.976496
[2025-12-02 02:30:03] 2025-12-02 10:29:17,208 | INFO     | chi2: 2.2485569451311638
[2025-12-02 02:30:03] 2025-12-02 10:29:17,208 | INFO     | current chi2=2.2485569451311638 (change=5.541215382489667 %)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,208 | INFO     | left removable region: 20
[2025-12-02 02:30:03] 2025-12-02 10:29:17,209 | INFO     | sum of square deviations: 333925516800.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,220 | INFO     | sum of deviations: 2371252207731.997
[2025-12-02 02:30:03] 2025-12-02 10:29:17,224 | INFO     | mean x: 1764639388.0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,224 | INFO     | mean y: 3182977.3853658536
[2025-12-02 02:30:03] 2025-12-02 10:29:17,224 | INFO     | intersect: -12527770286.518784
[2025-12-02 02:30:03] 2025-12-02 10:29:17,224 | INFO     | chi2: 0.252745083693745
[2025-12-02 02:30:03] 2025-12-02 10:29:17,224 | INFO     | current memory leak: 7.10 B/s (using 1025 data points, chi2=0.25)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | could have reported an average CPU frequency of 4000 MHz (39 samples)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | ..............................
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . Timing measurements:
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . get job = 0 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . initial setup = 8 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . payload setup = 6 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . stage-in = 0 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . payload execution = 64410 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . stage-out = 3 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | . log creation = 0 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,225 | INFO     | ..............................
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | 
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | job summary report
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | --------------------------------------------------
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | PanDA job id: 6893854961
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | task id: 47523449
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | errors: (none)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | pilot state: finished 
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | transexitcode: 0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | exeerrorcode: 0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | exeerrordiag: 
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | exitcode: 0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | exitmsg: OK
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | cpuconsumptiontime: 137508 s
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | nevents: 1000
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | neventsw: 0
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | pid: 259824
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | pgrp: 259824
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | corecount: 10
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | event service: False
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | sizes: {0: 2284329, 5: 2284591, 11: 2284647, 64419: 2339463, 64420: 2339462, 64423: 2348540, 64425: 2348724, 64432: 2348970}
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | --------------------------------------------------
[2025-12-02 02:30:03] 2025-12-02 10:29:17,552 | INFO     | 
[2025-12-02 02:30:03] 2025-12-02 10:29:17,553 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc523/slots/1
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,576 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | job 6893854961 has completed (purged errors)
[2025-12-02 02:30:03] 2025-12-02 10:29:17,577 | INFO     | overall cleanup function is called
[2025-12-02 02:30:03] 2025-12-02 10:29:18,591 | INFO     | --- collectZombieJob: --- 10, [259824]
[2025-12-02 02:30:03] 2025-12-02 10:29:18,591 | INFO     | zombie collector waiting for pid 259824
[2025-12-02 02:30:03] 2025-12-02 10:29:18,591 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 02:30:03] 2025-12-02 10:29:18,591 | INFO     | collected zombie processes
[2025-12-02 02:30:03] 2025-12-02 10:29:18,591 | INFO     | will attempt to kill all subprocesses of pid=259824
[2025-12-02 02:30:03] 2025-12-02 10:29:18,871 | INFO     | process IDs to be killed: [259824] (in reverse order)
[2025-12-02 02:30:03] 2025-12-02 10:29:19,013 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 02:30:03] 2025-12-02 10:29:19,014 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 02:30:03] 2025-12-02 10:29:19,020 | INFO     | did not find any defunct processes belonging to 259824
[2025-12-02 02:30:03] 2025-12-02 10:29:19,025 | INFO     | did not find any defunct processes belonging to 259824
[2025-12-02 02:30:03] 2025-12-02 10:29:19,025 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 02:30:03] 2025-12-02 10:29:19,025 | INFO     | ready for new job
[2025-12-02 02:30:03] 2025-12-02 10:29:19,026 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 02:30:03] 2025-12-02 10:29:19,028 | INFO     | ***************************************
[2025-12-02 02:30:03] 2025-12-02 10:29:19,029 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 02:30:03] 2025-12-02 10:29:19,029 | INFO     | ***************************************
[2025-12-02 02:30:03] 2025-12-02 10:29:19,029 | INFO     | 
[2025-12-02 02:30:03] 2025-12-02 10:29:19,030 | INFO     | architecture information:
[2025-12-02 02:30:03] 2025-12-02 10:29:19,030 | INFO     | executing command: cat /etc/os-release
[2025-12-02 02:30:03] 2025-12-02 10:29:19,047 | INFO     | cat /etc/os-release:
[2025-12-02 02:30:03] NAME="CentOS Linux"
[2025-12-02 02:30:03] VERSION="7 (Core)"
[2025-12-02 02:30:03] ID="centos"
[2025-12-02 02:30:03] ID_LIKE="rhel fedora"
[2025-12-02 02:30:03] VERSION_ID="7"
[2025-12-02 02:30:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 02:30:03] ANSI_COLOR="0;31"
[2025-12-02 02:30:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 02:30:03] HOME_URL="https://www.centos.org/"
[2025-12-02 02:30:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 02:30:03] 
[2025-12-02 02:30:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 02:30:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 02:30:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 02:30:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 02:30:03] 
[2025-12-02 02:30:03] 2025-12-02 10:29:19,047 | INFO     | ***************************************
[2025-12-02 02:30:03] 2025-12-02 10:29:19,550 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc523/slots/1
[2025-12-02 02:30:03] 2025-12-02 10:29:19,570 | INFO     | sufficient remaining disk space (179774160896 B)
[2025-12-02 02:30:03] 2025-12-02 10:29:19,570 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 02:30:03] 2025-12-02 10:29:19,570 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 02:30:03] 2025-12-02 10:29:19,571 | INFO     | update_server=False
[2025-12-02 02:30:03] 2025-12-02 10:29:19,571 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 02:30:03] 2025-12-02 10:29:19,571 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 02:30:03] 2025-12-02 10:29:20,149 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:30:03] 2025-12-02 10:29:20,149 | INFO     | aborting loop
[2025-12-02 02:30:03] 2025-12-02 10:29:20,491 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 02:30:03] 2025-12-02 10:29:20,576 | INFO     | [job] retrieve thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:20,674 | INFO     | all data control threads have been joined
[2025-12-02 02:30:03] 2025-12-02 10:29:20,683 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:20,714 | INFO     | [payload] validate_post thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:20,761 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:20,808 | INFO     | all job control threads have been joined
[2025-12-02 02:30:03] 2025-12-02 10:29:20,934 | INFO     | all payload control threads have been joined
[2025-12-02 02:30:03] 2025-12-02 10:29:21,154 | INFO     | [job] job monitor thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,155 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,286 | INFO     | [data] copytool_in thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,294 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,569 | INFO     | [payload] failed_post thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,576 | INFO     | [data] copytool_out thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,679 | INFO     | [data] control thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,739 | INFO     | [job] validate thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,813 | INFO     | [job] control thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:21,939 | INFO     | [payload] control thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:22,288 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 02:30:03] 2025-12-02 10:29:23,293 | INFO     | [job] queue monitor thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:24,496 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 02:30:03] 2025-12-02 10:29:48,938 | INFO     | PID=244276 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 02:30:03] 2025-12-02 10:29:48,939 | INFO     | .. there are 14 such processes running
[2025-12-02 02:30:03] 2025-12-02 10:29:48,939 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 02:30:03] 2025-12-02 10:29:48,939 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 02:30:03] 2025-12-02 10:29:48,939 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 02:30:03] 2025-12-02 10:29:56,147 | INFO     | [monitor] cgroup control has ended
[2025-12-02 02:30:03] 2025-12-02 10:29:57,958 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127166825948992)>', '<ExcThread(monitor, started 127165509129984)>']
[2025-12-02 02:30:03] 2025-12-02 10:29:57,984 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 02:30:03] 2025-12-02 10:29:57,984 | INFO     | [monitor] control thread has ended
[2025-12-02 02:30:03] 2025-12-02 10:30:02,983 | INFO     | all workflow threads have been joined
[2025-12-02 02:30:03] 2025-12-02 10:30:02,983 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 02:30:03] 2025-12-02 10:30:02,983 | INFO     | traces error code: 0
[2025-12-02 02:30:03] 2025-12-02 10:30:02,983 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 02:30:03] 2025-12-02 10:30:03,142 [wrapper] ==== pilot stdout END ====
[2025-12-02 02:30:03] 2025-12-02 10:30:03,144 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 02:30:03] 2025-12-02 10:30:03,156 [wrapper] pilotpid: 244276
[2025-12-02 02:30:03] 2025-12-02 10:30:03,158 [wrapper] Pilot exit status: 0
[2025-12-02 02:30:03] 2025-12-02 10:30:03,174 [wrapper] pandaids: 6893854961
[2025-12-02 02:30:03] 2025-12-02 10:30:03,247 [wrapper] cleanup supervisor_pilot 1740951 244278
[2025-12-02 02:30:03] 2025-12-02 10:30:03,249 [wrapper] Test setup, not cleaning
[2025-12-02 02:30:03] 2025-12-02 10:30:03,251 [wrapper] apfmon messages muted
[2025-12-02 02:30:03] 2025-12-02 10:30:03,253 [wrapper] ==== wrapper stdout END ====
[2025-12-02 02:30:03] 2025-12-02 10:30:03,258 [wrapper] ==== wrapper stderr END ====
[2025-12-02 02:30:03]  *** Error codes and diagnostics ***
[2025-12-02 02:30:03]     "exeErrorCode": 0,
[2025-12-02 02:30:03]     "exeErrorDiag": "",
[2025-12-02 02:30:03]     "pilotErrorCode": 0,
[2025-12-02 02:30:03]     "pilotErrorDiag": "",
[2025-12-02 02:30:03]  *** Listing of results directory ***
[2025-12-02 02:30:03] total 1343028
[2025-12-02 02:30:03] -rw-r--r-- 1 root root    576529 Nov 20 04:07 pilot3.tar.gz
[2025-12-02 02:30:03] -rwx------ 1 4871 1028     36292 Nov 20 04:29 runpilot2-wrapper.sh
[2025-12-02 02:30:03] -rw-r--r-- 1 root root      5112 Nov 20 04:29 queuedata.json
[2025-12-02 02:30:03] -rw-r--r-- 1 root root       100 Dec  1 08:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 02:30:03] -rwxr-xr-x 1 root root      7986 Dec  1 08:34 run_atlas
[2025-12-02 02:30:03] -rw-r--r-- 1 root root       105 Dec  1 08:34 job.xml
[2025-12-02 02:30:03] -rw-r--r-- 2 root root 411245529 Dec  1 08:34 EVNT.47493127._000435.pool.root.1
[2025-12-02 02:30:03] -rw-r--r-- 2 root root    590100 Dec  1 08:34 input.tar.gz
[2025-12-02 02:30:03] -rw-r--r-- 2 root root     15847 Dec  1 08:34 start_atlas.sh
[2025-12-02 02:30:03] drwxrwx--x 2 root root      4096 Dec  1 08:34 shared
[2025-12-02 02:30:03] -rw-r--r-- 1 root root         0 Dec  1 08:34 boinc_lockfile
[2025-12-02 02:30:03] -rw-r--r-- 1 root root      2786 Dec  1 08:34 pandaJob.out
[2025-12-02 02:30:03] -rw------- 1 root root    992142 Dec  1 08:35 agis_schedconf.cvmfs.json
[2025-12-02 02:30:03] drwxr-xr-x 5  320  320      4096 Dec  1 08:35 pilot3
[2025-12-02 02:30:03] -rw-r--r-- 1 root root      7067 Dec  1 08:36 init_data.xml
[2025-12-02 02:30:03] -rw-r--r-- 1 root root       533 Dec  2 02:19 boinc_task_state.xml
[2025-12-02 02:30:03] -rw------- 1 root root 936964342 Dec  2 02:28 HITS.47523449._004345.pool.root.1
[2025-12-02 02:30:03] -rw------- 1 root root      1055 Dec  2 02:29 memory_monitor_summary.json
[2025-12-02 02:30:03] -rw------- 1 root root   1516240 Dec  2 02:29 agis_ddmendpoints.agis.ALL.json
[2025-12-02 02:30:03] -rw------- 1 root root   2407044 Dec  2 02:29 log.47523449._004345.job.log.tgz.1
[2025-12-02 02:30:03] -rw------- 1 root root      8610 Dec  2 02:29 heartbeat.json
[2025-12-02 02:30:03] -rw------- 1 root root        95 Dec  2 02:29 pilot_heartbeat.json
[2025-12-02 02:30:03] -rw------- 1 root root      4838 Dec  2 02:30 pilotlog.txt
[2025-12-02 02:30:03] -rw-r--r-- 1 root root      8192 Dec  2 02:30 boinc_mmap_file
[2025-12-02 02:30:03] -rw-r--r-- 1 root root        29 Dec  2 02:30 wrapper_checkpoint.txt
[2025-12-02 02:30:03] -rw------- 1 root root   9159203 Dec  2 02:30 log.47523449._004345.job.log.1
[2025-12-02 02:30:03] -rw------- 1 root root       353 Dec  2 02:30 output.list
[2025-12-02 02:30:03] -rw-r--r-- 1 root root       620 Dec  2 02:30 runtime_log
[2025-12-02 02:30:03] -rw------- 1 root root  11581440 Dec  2 02:30 result.tar.gz
[2025-12-02 02:30:03] -rw-r--r-- 1 root root      9021 Dec  2 02:30 runtime_log.err
[2025-12-02 02:30:03] -rw------- 1 root root       663 Dec  2 02:30 KwwNDmTyIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmanHKDmMILdUo.diag
[2025-12-02 02:30:03] -rw-r--r-- 1 root root     21403 Dec  2 02:30 stderr.txt
[2025-12-02 02:30:03] HITS file was successfully produced:
[2025-12-02 02:30:03] -rw------- 1 root root 936964342 Dec  2 02:28 shared/HITS.pool.root.1
[2025-12-02 02:30:03]  *** Contents of shared directory: ***
[2025-12-02 02:30:03] total 1328532
[2025-12-02 02:30:03] -rw-r--r-- 2 root root 411245529 Dec  1 08:34 ATLAS.root_0
[2025-12-02 02:30:03] -rw-r--r-- 2 root root    590100 Dec  1 08:34 input.tar.gz
[2025-12-02 02:30:03] -rw-r--r-- 2 root root     15847 Dec  1 08:34 start_atlas.sh
[2025-12-02 02:30:03] -rw------- 1 root root 936964342 Dec  2 02:28 HITS.pool.root.1
[2025-12-02 02:30:03] -rw------- 1 root root  11581440 Dec  2 02:30 result.tar.gz
02:30:05 (236606): run_atlas exited; CPU time 137991.448393
02:30:05 (236606): called boinc_finish(0)

</stderr_txt>
]]>

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