Stderr output

<core_client_version>7.23.1</core_client_version>
<![CDATA[
<stderr_txt>
19:35:35 (3153014): wrapper (7.7.26015): starting
19:35:35 (3153014): wrapper: running run_atlas (--nthreads 10)
[2025-12-02 19:35:35] Arguments: --nthreads 10
[2025-12-02 19:35:35] Threads: 10
[2025-12-02 19:35:35] Checking for CVMFS
[2025-12-02 19:35:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 19:35:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 19:35:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 19:35:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 19:35:35] 2.13.3.0 4125 2155 70464 153579 3 103 3574020 4096000 12496 130560 0 328905128 99.998 761695 653 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 0
[2025-12-02 19:35:35] CVMFS is ok
[2025-12-02 19:35:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 19:35:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-12-02 19:35:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-12-02 19:35:35] Further information can be found at the LHC@home message board.
[2025-12-02 19:35:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 19:35:35] Checking for apptainer binary...
[2025-12-02 19:35:35] apptainer is not installed, using version from CVMFS
[2025-12-02 19:35:35] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 19:35:35] 7950x-linux
[2025-12-02 19:35:35] apptainer works
[2025-12-02 19:35:35] Set ATHENA_PROC_NUMBER=10
[2025-12-02 19:35:35] Set ATHENA_CORE_NUMBER=10
[2025-12-02 19:35:35] Starting ATLAS job with PandaID=6894267625
[2025-12-02 19:35:35] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/multiboinc/boinc523/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 12:07:56]  *** The last 200 lines of the pilot log: ***
[2025-12-03 12:07:56] 2025-12-03 20:07:21,683 | INFO     | PID=3156859 has CPU usage=9.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:07:56] 2025-12-03 20:07:21,684 | INFO     | .. there are 10 such processes running
[2025-12-03 12:07:56] 2025-12-03 20:07:22,393 | INFO     | CPU arch script returned: x86-64-v4
[2025-12-03 12:07:56] 2025-12-03 20:07:22,395 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4000.12590625
[2025-12-03 12:07:56] 2025-12-03 20:07:22,399 | INFO     | using path: /var/lib/multiboinc/boinc523/slots/2/PanDA_Pilot-6894267625/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,399 | INFO     | extracted standard info from prmon json
[2025-12-03 12:07:56] 2025-12-03 20:07:22,399 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 12:07:56] 2025-12-03 20:07:22,399 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 12:07:56] 2025-12-03 20:07:22,406 | INFO     | fitting pss+swap vs Time
[2025-12-03 12:07:56] 2025-12-03 20:07:22,407 | INFO     | sum of square deviations: 287403342200.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,417 | INFO     | sum of deviations: 2312307211295.0054
[2025-12-03 12:07:56] 2025-12-03 20:07:22,418 | INFO     | mean x: 1764762685.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,418 | INFO     | mean y: 3160923.775384615
[2025-12-03 12:07:56] 2025-12-03 20:07:22,418 | INFO     | intersect: -14195259496.506824
[2025-12-03 12:07:56] 2025-12-03 20:07:22,418 | INFO     | chi2: 3.631820703919553
[2025-12-03 12:07:56] 2025-12-03 20:07:22,419 | INFO     | sum of square deviations: 283004385302.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,432 | INFO     | sum of deviations: 2519532823305.4995
[2025-12-03 12:07:56] 2025-12-03 20:07:22,432 | INFO     | mean x: 1764762532.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,432 | INFO     | mean y: 3168096.0092783505
[2025-12-03 12:07:56] 2025-12-03 20:07:22,432 | INFO     | intersect: -15708168395.193178
[2025-12-03 12:07:56] 2025-12-03 20:07:22,433 | INFO     | chi2: 2.1680478558299363
[2025-12-03 12:07:56] 2025-12-03 20:07:22,433 | INFO     | current chi2=2.1680478558299363 (change=40.30410550030391 %)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,434 | INFO     | sum of square deviations: 278650545530.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,444 | INFO     | sum of deviations: 2514110864443.999
[2025-12-03 12:07:56] 2025-12-03 20:07:22,444 | INFO     | mean x: 1764762380.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,444 | INFO     | mean y: 3167904.216580311
[2025-12-03 12:07:56] 2025-12-03 20:07:22,444 | INFO     | intersect: -15919314014.062582
[2025-12-03 12:07:56] 2025-12-03 20:07:22,444 | INFO     | chi2: 2.1394389855823834
[2025-12-03 12:07:56] 2025-12-03 20:07:22,445 | INFO     | current chi2=2.1394389855823834 (change=1.3195682083595566 %)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,445 | INFO     | right removable region: 964
[2025-12-03 12:07:56] 2025-12-03 20:07:22,445 | INFO     | sum of square deviations: 283004385302.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,455 | INFO     | sum of deviations: 2060229144500.5005
[2025-12-03 12:07:56] 2025-12-03 20:07:22,455 | INFO     | mean x: 1764762837.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,456 | INFO     | mean y: 3169648.262886598
[2025-12-03 12:07:56] 2025-12-03 20:07:22,456 | INFO     | intersect: -12844037037.466103
[2025-12-03 12:07:56] 2025-12-03 20:07:22,456 | INFO     | chi2: 1.8156486547934767
[2025-12-03 12:07:56] 2025-12-03 20:07:22,456 | INFO     | current chi2=1.8156486547934767 (change=50.00720567416826 %)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,457 | INFO     | sum of square deviations: 278650545530.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | sum of deviations: 1972031586931.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | mean x: 1764762990.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | mean y: 3172737.2393782386
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | intersect: -12486192223.835552
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | chi2: 1.7356582332285293
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | current chi2=1.7356582332285293 (change=4.405611259302038 %)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,467 | INFO     | left removable region: 20
[2025-12-03 12:07:56] 2025-12-03 20:07:22,468 | INFO     | sum of square deviations: 260851849020.0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | sum of deviations: 2041481962406.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | mean x: 1764762959.5
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | mean y: 3184434.5455508474
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | intersect: -13808225234.496643
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | chi2: 0.18728120909152587
[2025-12-03 12:07:56] 2025-12-03 20:07:22,478 | INFO     | current memory leak: 7.83 B/s (using 944 data points, chi2=0.19)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | could have reported an average CPU frequency of 4000 MHz (36 samples)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | ..............................
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . Timing measurements:
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . get job = 0 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . initial setup = 3 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . payload setup = 6 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . stage-in = 0 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . payload execution = 59457 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . stage-out = 3 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | . log creation = 0 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,479 | INFO     | ..............................
[2025-12-03 12:07:56] 2025-12-03 20:07:22,684 | INFO     | time since job start (59492s) is within the limit (172800.0s)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | 
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | job summary report
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | --------------------------------------------------
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | PanDA job id: 6894267625
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | task id: 47533967
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | errors: (none)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | pilot state: finished 
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | transexitcode: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | exeerrorcode: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | exeerrordiag: 
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | exitcode: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | exitmsg: OK
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | cpuconsumptiontime: 136082 s
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | nevents: 1000
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | neventsw: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | pid: 3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | pgrp: 3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | corecount: 10
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | event service: False
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | sizes: {0: 2284328, 5: 2284590, 11: 2284646, 59467: 2337046, 59471: 2346124, 59476: 2346314}
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | --------------------------------------------------
[2025-12-03 12:07:56] 2025-12-03 20:07:22,878 | INFO     | 
[2025-12-03 12:07:56] 2025-12-03 20:07:22,879 | INFO     | executing command: ls -lF /var/lib/multiboinc/boinc523/slots/2
[2025-12-03 12:07:56] 2025-12-03 20:07:22,903 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,903 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,903 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | job 6894267625 has completed (purged errors)
[2025-12-03 12:07:56] 2025-12-03 20:07:22,904 | INFO     | overall cleanup function is called
[2025-12-03 12:07:56] 2025-12-03 20:07:23,920 | INFO     | --- collectZombieJob: --- 10, [3163674]
[2025-12-03 12:07:56] 2025-12-03 20:07:23,920 | INFO     | zombie collector waiting for pid 3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:23,920 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 12:07:56] 2025-12-03 20:07:23,920 | INFO     | collected zombie processes
[2025-12-03 12:07:56] 2025-12-03 20:07:23,920 | INFO     | will attempt to kill all subprocesses of pid=3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:24,179 | INFO     | process IDs to be killed: [3163674] (in reverse order)
[2025-12-03 12:07:56] 2025-12-03 20:07:24,293 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 12:07:56] 2025-12-03 20:07:24,293 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 12:07:56] 2025-12-03 20:07:24,298 | INFO     | did not find any defunct processes belonging to 3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:24,302 | INFO     | did not find any defunct processes belonging to 3163674
[2025-12-03 12:07:56] 2025-12-03 20:07:24,303 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 12:07:56] 2025-12-03 20:07:24,303 | INFO     | ready for new job
[2025-12-03 12:07:56] 2025-12-03 20:07:24,303 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 12:07:56] 2025-12-03 20:07:24,306 | INFO     | ***************************************
[2025-12-03 12:07:56] 2025-12-03 20:07:24,307 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 12:07:56] 2025-12-03 20:07:24,307 | INFO     | ***************************************
[2025-12-03 12:07:56] 2025-12-03 20:07:24,307 | INFO     | 
[2025-12-03 12:07:56] 2025-12-03 20:07:24,308 | INFO     | architecture information:
[2025-12-03 12:07:56] 2025-12-03 20:07:24,308 | INFO     | executing command: cat /etc/os-release
[2025-12-03 12:07:56] 2025-12-03 20:07:24,324 | INFO     | cat /etc/os-release:
[2025-12-03 12:07:56] NAME="CentOS Linux"
[2025-12-03 12:07:56] VERSION="7 (Core)"
[2025-12-03 12:07:56] ID="centos"
[2025-12-03 12:07:56] ID_LIKE="rhel fedora"
[2025-12-03 12:07:56] VERSION_ID="7"
[2025-12-03 12:07:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 12:07:56] ANSI_COLOR="0;31"
[2025-12-03 12:07:56] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 12:07:56] HOME_URL="https://www.centos.org/"
[2025-12-03 12:07:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 12:07:56] 
[2025-12-03 12:07:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 12:07:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 12:07:56] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 12:07:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 12:07:56] 
[2025-12-03 12:07:56] 2025-12-03 20:07:24,324 | INFO     | ***************************************
[2025-12-03 12:07:56] 2025-12-03 20:07:24,826 | INFO     | executing command: df -mP /var/lib/multiboinc/boinc523/slots/2
[2025-12-03 12:07:56] 2025-12-03 20:07:24,846 | INFO     | sufficient remaining disk space (161958854656 B)
[2025-12-03 12:07:56] 2025-12-03 20:07:24,846 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 12:07:56] 2025-12-03 20:07:24,847 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 12:07:56] 2025-12-03 20:07:24,847 | INFO     | update_server=False
[2025-12-03 12:07:56] 2025-12-03 20:07:24,847 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 12:07:56] 2025-12-03 20:07:24,847 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:07:56] 2025-12-03 20:07:24,847 | INFO     | aborting loop
[2025-12-03 12:07:56] 2025-12-03 20:07:25,067 | INFO     | all data control threads have been joined
[2025-12-03 12:07:56] 2025-12-03 20:07:25,512 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 12:07:56] 2025-12-03 20:07:25,711 | INFO     | all job control threads have been joined
[2025-12-03 12:07:56] 2025-12-03 20:07:25,746 | INFO     | all payload control threads have been joined
[2025-12-03 12:07:56] 2025-12-03 20:07:25,852 | INFO     | [job] retrieve thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:25,852 | INFO     | [job] job monitor thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,072 | INFO     | [data] control thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,089 | INFO     | [job] validate thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,434 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,497 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,497 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,716 | INFO     | [job] control thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,743 | INFO     | [data] copytool_in thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,747 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:26,751 | INFO     | [payload] control thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:27,212 | INFO     | [payload] failed_post thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:27,364 | INFO     | [payload] validate_post thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:27,517 | INFO     | [data] copytool_out thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:27,547 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 12:07:56] 2025-12-03 20:07:28,050 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 12:07:56] 2025-12-03 20:07:28,552 | INFO     | [job] queue monitor thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:28,795 | INFO     | [monitor] cgroup control has ended
[2025-12-03 12:07:56] 2025-12-03 20:07:32,055 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 12:07:56] 2025-12-03 20:07:32,176 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 127220527650624)>', '<ExcThread(monitor, started 127220177676032)>']
[2025-12-03 12:07:56] 2025-12-03 20:07:37,201 | INFO     | all workflow threads have been joined
[2025-12-03 12:07:56] 2025-12-03 20:07:37,201 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 12:07:56] 2025-12-03 20:07:37,201 | INFO     | traces error code: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:37,201 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 12:07:56] 2025-12-03 20:07:55,994 | INFO     | PID=3156859 has CPU usage=1.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 12:07:56] 2025-12-03 20:07:55,994 | INFO     | .. there are 10 such processes running
[2025-12-03 12:07:56] 2025-12-03 20:07:55,995 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 12:07:56] 2025-12-03 20:07:55,995 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 12:07:56] 2025-12-03 20:07:55,995 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 12:07:56] 2025-12-03 20:07:55,995 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 12:07:56] 2025-12-03 20:07:55,995 | INFO     | [monitor] control thread has ended
[2025-12-03 12:07:56] 2025-12-03 20:07:56,102 [wrapper] ==== pilot stdout END ====
[2025-12-03 12:07:56] 2025-12-03 20:07:56,104 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 12:07:56] 2025-12-03 20:07:56,105 [wrapper] pilotpid: 3156859
[2025-12-03 12:07:56] 2025-12-03 20:07:56,111 [wrapper] Pilot exit status: 0
[2025-12-03 12:07:56] 2025-12-03 20:07:56,120 [wrapper] pandaids: 6894267625
[2025-12-03 12:07:56] 2025-12-03 20:07:56,167 [wrapper] cleanup supervisor_pilot  248172 3156860
[2025-12-03 12:07:56] 2025-12-03 20:07:56,169 [wrapper] Test setup, not cleaning
[2025-12-03 12:07:56] 2025-12-03 20:07:56,171 [wrapper] apfmon messages muted
[2025-12-03 12:07:56] 2025-12-03 20:07:56,174 [wrapper] ==== wrapper stdout END ====
[2025-12-03 12:07:56] 2025-12-03 20:07:56,176 [wrapper] ==== wrapper stderr END ====
[2025-12-03 12:07:56]  *** Error codes and diagnostics ***
[2025-12-03 12:07:56]     "exeErrorCode": 0,
[2025-12-03 12:07:56]     "exeErrorDiag": "",
[2025-12-03 12:07:56]     "pilotErrorCode": 0,
[2025-12-03 12:07:56]     "pilotErrorDiag": "",
[2025-12-03 12:07:56]  *** Listing of results directory ***
[2025-12-03 12:07:56] total 1320164
[2025-12-03 12:07:56] -rw-r--r-- 1 root root    576529 Nov 20 21:09 pilot3.tar.gz
[2025-12-03 12:07:56] -rw-r--r-- 1 root root      5112 Nov 20 21:24 queuedata.json
[2025-12-03 12:07:56] -rwx------ 1 4871 1028     36292 Nov 20 21:25 runpilot2-wrapper.sh
[2025-12-03 12:07:56] -rw-r--r-- 1 root root       100 Dec  2 19:35 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 12:07:56] -rwxr-xr-x 1 root root      7986 Dec  2 19:35 run_atlas
[2025-12-03 12:07:56] -rw-r--r-- 1 root root       105 Dec  2 19:35 job.xml
[2025-12-03 12:07:56] -rw-r--r-- 1 root root      7072 Dec  2 19:35 init_data.xml
[2025-12-03 12:07:56] -rw-r--r-- 2 root root 412049527 Dec  2 19:35 EVNT.47493127._002243.pool.root.1
[2025-12-03 12:07:56] -rw-r--r-- 2 root root     15847 Dec  2 19:35 start_atlas.sh
[2025-12-03 12:07:56] drwxrwx--x 2 root root      4096 Dec  2 19:35 shared
[2025-12-03 12:07:56] -rw-r--r-- 2 root root    590104 Dec  2 19:35 input.tar.gz
[2025-12-03 12:07:56] -rw-r--r-- 1 root root         0 Dec  2 19:35 boinc_lockfile
[2025-12-03 12:07:56] -rw-r--r-- 1 root root      2785 Dec  2 19:35 pandaJob.out
[2025-12-03 12:07:56] -rw------- 1 root root    989300 Dec  2 19:35 agis_schedconf.cvmfs.json
[2025-12-03 12:07:56] drwxr-xr-x 5  320  320      4096 Dec  2 19:35 pilot3
[2025-12-03 12:07:56] -rw-r--r-- 1 root root       533 Dec  3 11:59 boinc_task_state.xml
[2025-12-03 12:07:56] -rw------- 1 root root 914281937 Dec  3 12:06 HITS.47533967._002145.pool.root.1
[2025-12-03 12:07:56] -rw------- 1 root root      1063 Dec  3 12:07 memory_monitor_summary.json
[2025-12-03 12:07:56] -rw------- 1 root root   1516240 Dec  3 12:07 agis_ddmendpoints.agis.ALL.json
[2025-12-03 12:07:56] -rw------- 1 root root   2342895 Dec  3 12:07 log.47533967._002145.job.log.tgz.1
[2025-12-03 12:07:56] -rw------- 1 root root      8602 Dec  3 12:07 heartbeat.json
[2025-12-03 12:07:56] -rw-r--r-- 1 root root        29 Dec  3 12:07 wrapper_checkpoint.txt
[2025-12-03 12:07:56] -rw-r--r-- 1 root root      8192 Dec  3 12:07 boinc_mmap_file
[2025-12-03 12:07:56] -rw------- 1 root root       823 Dec  3 12:07 pilotlog.txt
[2025-12-03 12:07:56] -rw------- 1 root root        95 Dec  3 12:07 pilot_heartbeat.json
[2025-12-03 12:07:56] -rw------- 1 root root   8456859 Dec  3 12:07 log.47533967._002145.job.log.1
[2025-12-03 12:07:56] -rw------- 1 root root       353 Dec  3 12:07 output.list
[2025-12-03 12:07:56] -rw-r--r-- 1 root root       620 Dec  3 12:07 runtime_log
[2025-12-03 12:07:56] -rw------- 1 root root  10823680 Dec  3 12:07 result.tar.gz
[2025-12-03 12:07:56] -rw-r--r-- 1 root root      9021 Dec  3 12:07 runtime_log.err
[2025-12-03 12:07:56] -rw------- 1 root root       662 Dec  3 12:07 OgxKDmepYg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmg6IKDmvaa7rn.diag
[2025-12-03 12:07:56] -rw-r--r-- 1 root root     21457 Dec  3 12:07 stderr.txt
[2025-12-03 12:07:56] HITS file was successfully produced:
[2025-12-03 12:07:56] -rw------- 1 root root 914281937 Dec  3 12:06 shared/HITS.pool.root.1
[2025-12-03 12:07:56]  *** Contents of shared directory: ***
[2025-12-03 12:07:56] total 1306428
[2025-12-03 12:07:56] -rw-r--r-- 2 root root 412049527 Dec  2 19:35 ATLAS.root_0
[2025-12-03 12:07:56] -rw-r--r-- 2 root root     15847 Dec  2 19:35 start_atlas.sh
[2025-12-03 12:07:56] -rw-r--r-- 2 root root    590104 Dec  2 19:35 input.tar.gz
[2025-12-03 12:07:56] -rw------- 1 root root 914281937 Dec  3 12:06 HITS.pool.root.1
[2025-12-03 12:07:56] -rw------- 1 root root  10823680 Dec  3 12:07 result.tar.gz
12:07:57 (3153014): run_atlas exited; CPU time 136316.841388
12:07:57 (3153014): called boinc_finish(0)

</stderr_txt>
]]>

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