Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
15:22:23 (15702): wrapper (7.7.26015): starting
15:22:23 (15702): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 15:22:23] Arguments: --nthreads 12
[2025-11-30 15:22:23] Threads: 12
[2025-11-30 15:22:23] Checking for CVMFS
[2025-11-30 15:22:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 15:22:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 15:22:23] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 15:22:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 15:22:23] 2.11.2.0 2913 293916 95696 153493 1 1 11967008 20275200 1 130560 1 132741394 99.962 17722808 13977 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 15:22:23] CVMFS is ok
[2025-11-30 15:22:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 15:22:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 15:22:23] Further information can be found at the LHC@home message board.
[2025-11-30 15:22:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 15:22:23] Checking for apptainer binary...
[2025-11-30 15:22:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 15:22:23] Running /usr/bin/apptainer --version
[2025-11-30 15:22:23] apptainer version 1.3.2-1.el7
[2025-11-30 15:22:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 15:22:24] c-205-6.aglt2.org
[2025-11-30 15:22:24] apptainer works
[2025-11-30 15:22:24] Set ATHENA_PROC_NUMBER=12
[2025-11-30 15:22:24] Set ATHENA_CORE_NUMBER=12
[2025-11-30 15:22:24] Starting ATLAS job with PandaID=6893852452
[2025-11-30 15:22:24] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 22:33:28]  *** The last 200 lines of the pilot log: ***
[2025-11-30 22:33:28] 2025-12-01 03:32:23,283 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 22:33:28] 2025-12-01 03:32:23,284 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 22:33:28] 2025-12-01 03:32:23,292 | INFO     | fitting pss+swap vs Time
[2025-11-30 22:33:28] 2025-12-01 03:32:23,292 | INFO     | sum of square deviations: 23302781403.943005
[2025-11-30 22:33:28] 2025-12-01 03:32:23,296 | INFO     | sum of deviations: 287445382903.26056
[2025-11-30 22:33:28] 2025-12-01 03:32:23,296 | INFO     | time since job start (25783s) is within the limit (172800.0s)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,297 | INFO     | mean x: 1764547030.7819905
[2025-11-30 22:33:28] 2025-12-01 03:32:23,297 | INFO     | mean y: 3431992.6658767774
[2025-11-30 22:33:28] 2025-12-01 03:32:23,297 | INFO     | intersect: -21762677731.39122
[2025-11-30 22:33:28] 2025-12-01 03:32:23,298 | INFO     | chi2: 5.938077106583764
[2025-11-30 22:33:28] 2025-12-01 03:32:23,298 | INFO     | sum of square deviations: 22484281421.04047
[2025-11-30 22:33:28] 2025-12-01 03:32:23,302 | INFO     | sum of deviations: 437355855135.1367
[2025-11-30 22:33:28] 2025-12-01 03:32:23,302 | INFO     | mean x: 1764546878.2853718
[2025-11-30 22:33:28] 2025-12-01 03:32:23,302 | INFO     | mean y: 3459893.9568345323
[2025-11-30 22:33:28] 2025-12-01 03:32:23,303 | INFO     | intersect: -34319847772.720753
[2025-11-30 22:33:28] 2025-12-01 03:32:23,303 | INFO     | chi2: 3.2957763826648234
[2025-11-30 22:33:28] 2025-12-01 03:32:23,303 | INFO     | current chi2=3.2957763826648234 (change=44.49758190221755 %)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,304 | INFO     | sum of square deviations: 21685177150.62861
[2025-11-30 22:33:28] 2025-12-01 03:32:23,307 | INFO     | sum of deviations: 519593258668.5368
[2025-11-30 22:33:28] 2025-12-01 03:32:23,307 | INFO     | mean x: 1764546725.788835
[2025-11-30 22:33:28] 2025-12-01 03:32:23,308 | INFO     | mean y: 3475553.6383495145
[2025-11-30 22:33:28] 2025-12-01 03:32:23,308 | INFO     | intersect: -42276399632.85236
[2025-11-30 22:33:28] 2025-12-01 03:32:23,308 | INFO     | chi2: 2.356071352275084
[2025-11-30 22:33:28] 2025-12-01 03:32:23,308 | INFO     | current chi2=2.356071352275084 (change=28.512402580843016 %)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,309 | INFO     | sum of square deviations: 20905160266.93858
[2025-11-30 22:33:28] 2025-12-01 03:32:23,312 | INFO     | sum of deviations: 506978825472.23334
[2025-11-30 22:33:28] 2025-12-01 03:32:23,312 | INFO     | mean x: 1764546573.2850122
[2025-11-30 22:33:28] 2025-12-01 03:32:23,313 | INFO     | mean y: 3473087.316953317
[2025-11-30 22:33:28] 2025-12-01 03:32:23,313 | INFO     | intersect: -42789202873.64548
[2025-11-30 22:33:28] 2025-12-01 03:32:23,313 | INFO     | chi2: 2.354998375787668
[2025-11-30 22:33:28] 2025-12-01 03:32:23,313 | INFO     | current chi2=2.354998375787668 (change=0.04554091650831821 %)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,313 | INFO     | right removable region: 406
[2025-11-30 22:33:28] 2025-12-01 03:32:23,314 | INFO     | sum of square deviations: 22484208831.04047
[2025-11-30 22:33:28] 2025-12-01 03:32:23,318 | INFO     | sum of deviations: 156574204830.1702
[2025-11-30 22:33:28] 2025-12-01 03:32:23,318 | INFO     | mean x: 1764547183.2853718
[2025-11-30 22:33:28] 2025-12-01 03:32:23,318 | INFO     | mean y: 3456287.191846523
[2025-11-30 22:33:28] 2025-12-01 03:32:23,318 | INFO     | intersect: -12284393117.889423
[2025-11-30 22:33:28] 2025-12-01 03:32:23,318 | INFO     | chi2: 3.729454096418773
[2025-11-30 22:33:28] 2025-12-01 03:32:23,319 | INFO     | current chi2=3.729454096418773 (change=37.19424605847926 %)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,319 | INFO     | sum of square deviations: 21685057163.203876
[2025-11-30 22:33:28] 2025-12-01 03:32:23,323 | INFO     | sum of deviations: 123093365765.0488
[2025-11-30 22:33:28] 2025-12-01 03:32:23,323 | INFO     | mean x: 1764547335.7864077
[2025-11-30 22:33:28] 2025-12-01 03:32:23,323 | INFO     | mean y: 3462669.830097087
[2025-11-30 22:33:28] 2025-12-01 03:32:23,323 | INFO     | intersect: -10012838831.198902
[2025-11-30 22:33:28] 2025-12-01 03:32:23,324 | INFO     | chi2: 3.659123574863021
[2025-11-30 22:33:28] 2025-12-01 03:32:23,324 | INFO     | current chi2=3.659123574863021 (change=1.8858127687719064 %)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,324 | INFO     | left removable region: 20
[2025-11-30 22:33:28] 2025-12-01 03:32:23,325 | INFO     | sum of square deviations: 17833327172.282234
[2025-11-30 22:33:28] 2025-12-01 03:32:23,328 | INFO     | sum of deviations: 303791092826.2462
[2025-11-30 22:33:28] 2025-12-01 03:32:23,328 | INFO     | mean x: 1764547152.7797928
[2025-11-30 22:33:28] 2025-12-01 03:32:23,328 | INFO     | mean y: 3513536.8264248706
[2025-11-30 22:33:28] 2025-12-01 03:32:23,328 | INFO     | intersect: -30055583271.5126
[2025-11-30 22:33:28] 2025-12-01 03:32:23,329 | INFO     | chi2: 0.02529440931831021
[2025-11-30 22:33:28] 2025-12-01 03:32:23,329 | INFO     | current memory leak: 17.04 B/s (using 386 data points, chi2=0.03)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,329 | INFO     | could have reported an average CPU frequency of 2349 MHz (18 samples)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,329 | INFO     | ..............................
[2025-11-30 22:33:28] 2025-12-01 03:32:23,329 | INFO     | . Timing measurements:
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . get job = 0 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . initial setup = 2 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . payload setup = 7 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . stage-in = 0 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . payload execution = 25741 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . stage-out = 3 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | . log creation = 0 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,330 | INFO     | ..............................
[2025-11-30 22:33:28] 2025-12-01 03:32:23,409 | INFO     | 
[2025-11-30 22:33:28] 2025-12-01 03:32:23,409 | INFO     | job summary report
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | --------------------------------------------------
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | PanDA job id: 6893852452
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | task id: 47523449
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | errors: (none)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 22:33:28] 2025-12-01 03:32:23,410 | INFO     | pilot state: finished 
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | transexitcode: 0
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | exeerrorcode: 0
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | exeerrordiag: 
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | exitcode: 0
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | exitmsg: OK
[2025-11-30 22:33:28] 2025-12-01 03:32:23,411 | INFO     | cpuconsumptiontime: 294112 s
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | nevents: 1000
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | neventsw: 0
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | pid: 25824
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | pgrp: 25824
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | corecount: 12
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | event service: False
[2025-11-30 22:33:28] 2025-12-01 03:32:23,412 | INFO     | sizes: {0: 2284315, 5: 2284577, 11: 2284633, 25752: 2321869, 25756: 2330863, 25759: 2330919, 25767: 2331293}
[2025-11-30 22:33:28] 2025-12-01 03:32:23,413 | INFO     | --------------------------------------------------
[2025-11-30 22:33:28] 2025-12-01 03:32:23,413 | INFO     | 
[2025-11-30 22:33:28] 2025-12-01 03:32:23,413 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 22:33:28] 2025-12-01 03:32:23,437 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,437 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,438 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,439 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,440 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 22:33:28] 2025-12-01 03:32:23,441 | INFO     | job 6893852452 has completed (purged errors)
[2025-11-30 22:33:28] 2025-12-01 03:32:23,441 | INFO     | overall cleanup function is called
[2025-11-30 22:33:28] 2025-12-01 03:32:24,458 | INFO     | --- collectZombieJob: --- 10, [25824]
[2025-11-30 22:33:28] 2025-12-01 03:32:24,459 | INFO     | zombie collector waiting for pid 25824
[2025-11-30 22:33:28] 2025-12-01 03:32:24,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 22:33:28] 2025-12-01 03:32:24,459 | INFO     | collected zombie processes
[2025-11-30 22:33:28] 2025-12-01 03:32:24,459 | INFO     | will attempt to kill all subprocesses of pid=25824
[2025-11-30 22:33:28] 2025-12-01 03:32:24,551 | INFO     | process IDs to be killed: [25824] (in reverse order)
[2025-11-30 22:33:28] 2025-12-01 03:32:24,604 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 22:33:28] 2025-12-01 03:32:24,604 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 22:33:28] 2025-12-01 03:32:24,608 | INFO     | did not find any defunct processes belonging to 25824
[2025-11-30 22:33:28] 2025-12-01 03:32:24,610 | INFO     | did not find any defunct processes belonging to 25824
[2025-11-30 22:33:28] 2025-12-01 03:32:24,612 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 22:33:28] 2025-12-01 03:32:24,613 | INFO     | ready for new job
[2025-11-30 22:33:28] 2025-12-01 03:32:24,613 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 22:33:28] 2025-12-01 03:32:24,615 | INFO     | ***************************************
[2025-11-30 22:33:28] 2025-12-01 03:32:24,615 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 22:33:28] 2025-12-01 03:32:24,615 | INFO     | ***************************************
[2025-11-30 22:33:28] 2025-12-01 03:32:24,615 | INFO     | 
[2025-11-30 22:33:28] 2025-12-01 03:32:24,616 | INFO     | architecture information:
[2025-11-30 22:33:28] 2025-12-01 03:32:24,616 | INFO     | executing command: cat /etc/os-release
[2025-11-30 22:33:28] 2025-12-01 03:32:24,632 | INFO     | cat /etc/os-release:
[2025-11-30 22:33:28] NAME="CentOS Linux"
[2025-11-30 22:33:28] VERSION="7 (Core)"
[2025-11-30 22:33:28] ID="centos"
[2025-11-30 22:33:28] ID_LIKE="rhel fedora"
[2025-11-30 22:33:28] VERSION_ID="7"
[2025-11-30 22:33:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 22:33:28] ANSI_COLOR="0;31"
[2025-11-30 22:33:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 22:33:28] HOME_URL="https://www.centos.org/"
[2025-11-30 22:33:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 22:33:28] 
[2025-11-30 22:33:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 22:33:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 22:33:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 22:33:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 22:33:28] 
[2025-11-30 22:33:28] 2025-12-01 03:32:24,632 | INFO     | ***************************************
[2025-11-30 22:33:28] 2025-12-01 03:32:25,135 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 22:33:28] 2025-12-01 03:32:25,152 | INFO     | sufficient remaining disk space (28240248832 B)
[2025-11-30 22:33:28] 2025-12-01 03:32:25,153 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 22:33:28] 2025-12-01 03:32:25,153 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 22:33:28] 2025-12-01 03:32:25,153 | INFO     | update_server=False
[2025-11-30 22:33:28] 2025-12-01 03:32:25,153 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 22:33:28] 2025-12-01 03:32:25,154 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 22:33:28] 2025-12-01 03:32:25,154 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 22:33:28] 2025-12-01 03:32:25,155 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 22:33:28] 2025-12-01 03:32:25,155 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 22:33:28] 2025-12-01 03:32:25,155 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 22:33:28] 2025-12-01 03:32:25,249 | INFO     | all payload control threads have been joined
[2025-11-30 22:33:28] 2025-12-01 03:32:25,315 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 22:33:28] 2025-12-01 03:32:25,315 | INFO     | aborting loop
[2025-11-30 22:33:28] 2025-12-01 03:32:25,361 | INFO     | all data control threads have been joined
[2025-11-30 22:33:28] 2025-12-01 03:32:26,073 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 22:33:28] 2025-12-01 03:32:26,151 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 22:33:28] 2025-12-01 03:32:26,157 | INFO     | [job] queue monitor thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,159 | INFO     | [job] retrieve thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,255 | INFO     | [payload] control thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,319 | INFO     | [job] job monitor thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,328 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,358 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,367 | INFO     | [data] control thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,370 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,459 | INFO     | [payload] failed_post thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:26,811 | INFO     | all job control threads have been joined
[2025-11-30 22:33:28] 2025-12-01 03:32:26,914 | INFO     | [data] copytool_in thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:27,141 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:27,335 | INFO     | [job] validate thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:27,591 | INFO     | [payload] validate_post thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:27,814 | INFO     | [job] control thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:28,078 | INFO     | [data] copytool_out thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:32:30,157 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 22:33:28] 2025-12-01 03:33:22,084 | INFO     | [monitor] cgroup control has ended
[2025-11-30 22:33:28] 2025-12-01 03:33:23,572 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140052273030976)>', '<ExcThread(monitor, started 140051702871808)>']
[2025-11-30 22:33:28] 2025-12-01 03:33:24,406 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 22:33:28] 2025-12-01 03:33:24,406 | INFO     | [monitor] control thread has ended
[2025-11-30 22:33:28] 2025-12-01 03:33:28,585 | INFO     | all workflow threads have been joined
[2025-11-30 22:33:28] 2025-12-01 03:33:28,585 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 22:33:28] 2025-12-01 03:33:28,585 | INFO     | traces error code: 0
[2025-11-30 22:33:28] 2025-12-01 03:33:28,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 22:33:28] 2025-12-01 03:33:28,697 [wrapper] ==== pilot stdout END ====
[2025-11-30 22:33:28] 2025-12-01 03:33:28,701 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 22:33:28] 2025-12-01 03:33:28,704 [wrapper] pilotpid: 19392
[2025-11-30 22:33:28] 2025-12-01 03:33:28,708 [wrapper] Pilot exit status: 0
[2025-11-30 22:33:28] 2025-12-01 03:33:28,721 [wrapper] pandaids: 6893852452
[2025-11-30 22:33:28] 2025-12-01 03:33:28,770 [wrapper] cleanup supervisor_pilot 32618 19393
[2025-11-30 22:33:28] 2025-12-01 03:33:28,774 [wrapper] Test setup, not cleaning
[2025-11-30 22:33:28] 2025-12-01 03:33:28,778 [wrapper] apfmon messages muted
[2025-11-30 22:33:28] 2025-12-01 03:33:28,782 [wrapper] ==== wrapper stdout END ====
[2025-11-30 22:33:28] 2025-12-01 03:33:28,786 [wrapper] ==== wrapper stderr END ====
[2025-11-30 22:33:28]  *** Error codes and diagnostics ***
[2025-11-30 22:33:28]     "exeErrorCode": 0,
[2025-11-30 22:33:28]     "exeErrorDiag": "",
[2025-11-30 22:33:28]     "pilotErrorCode": 0,
[2025-11-30 22:33:28]     "pilotErrorDiag": "",
[2025-11-30 22:33:28]  *** Listing of results directory ***
[2025-11-30 22:33:28] total 1315452
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:54 pilot3.tar.gz
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:58 queuedata.json
[2025-11-30 22:33:28] -rwx------ 1 boincer umatlas     36292 Nov 20 06:59 runpilot2-wrapper.sh
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas       100 Nov 30 15:22 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 22:33:28] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 15:22 run_atlas
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas       105 Nov 30 15:22 job.xml
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas 412082956 Nov 30 15:22 EVNT.47493127._000383.pool.root.1
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 15:22 start_atlas.sh
[2025-11-30 22:33:28] drwxrwx--x 2 boincer umatlas      4096 Nov 30 15:22 shared
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas    590104 Nov 30 15:22 input.tar.gz
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas         0 Nov 30 15:22 boinc_lockfile
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas      2786 Nov 30 15:22 pandaJob.out
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas        57 Nov 30 15:22 setup.sh.local
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas    993245 Nov 30 15:22 agis_schedconf.cvmfs.json
[2025-11-30 22:33:28] drwx------ 5 boincer umatlas      4096 Nov 30 15:22 pilot3
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas       532 Nov 30 22:21 boinc_task_state.xml
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas      5955 Nov 30 22:30 init_data.xml
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas 919441607 Nov 30 22:31 HITS.47523449._003828.pool.root.1
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas        95 Nov 30 22:31 pilot_heartbeat.json
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas      1061 Nov 30 22:32 memory_monitor_summary.json
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas   1516240 Nov 30 22:32 agis_ddmendpoints.agis.ALL.json
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas   2177747 Nov 30 22:32 log.47523449._003828.job.log.tgz.1
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas      8665 Nov 30 22:32 heartbeat.json
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 22:33 boinc_mmap_file
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas        29 Nov 30 22:33 wrapper_checkpoint.txt
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas      4552 Nov 30 22:33 pilotlog.txt
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas   3610337 Nov 30 22:33 log.47523449._003828.job.log.1
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas       353 Nov 30 22:33 output.list
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas       620 Nov 30 22:33 runtime_log
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas   5806080 Nov 30 22:33 result.tar.gz
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas      9340 Nov 30 22:33 runtime_log.err
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas       669 Nov 30 22:33 MiwMDmqUIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmEhHKDmhlA5tm.diag
[2025-11-30 22:33:28] -rw-r--r-- 1 boincer umatlas     21035 Nov 30 22:33 stderr.txt
[2025-11-30 22:33:28] HITS file was successfully produced:
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas 919441607 Nov 30 22:31 shared/HITS.pool.root.1
[2025-11-30 22:33:28]  *** Contents of shared directory: ***
[2025-11-30 22:33:28] total 1306596
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas 412082956 Nov 30 15:22 ATLAS.root_0
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 15:22 start_atlas.sh
[2025-11-30 22:33:28] -rw-r--r-- 2 boincer umatlas    590104 Nov 30 15:22 input.tar.gz
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas 919441607 Nov 30 22:31 HITS.pool.root.1
[2025-11-30 22:33:28] -rw------- 1 boincer umatlas   5806080 Nov 30 22:33 result.tar.gz
22:33:30 (15702): run_atlas exited; CPU time 287394.228326
22:33:30 (15702): called boinc_finish(0)

</stderr_txt>
]]>

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