Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
16:06:54 (17142): wrapper (7.7.26015): starting
16:06:54 (17142): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 16:06:54] Arguments: --nthreads 12
[2025-11-30 16:06:54] Threads: 12
[2025-11-30 16:06:54] Checking for CVMFS
[2025-11-30 16:06:54] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 16:06:54] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 16:06:54] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 16:06:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 16:06:55] 2.11.2.0 2981 293914 88788 153493 3 68 11639118 20275200 1 130560 1 133563498 99.964 17723412 14692 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 16:06:55] CVMFS is ok
[2025-11-30 16:06:55] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 16:06:55] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 16:06:55] Further information can be found at the LHC@home message board.
[2025-11-30 16:06:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 16:06:55] Checking for apptainer binary...
[2025-11-30 16:06:55] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 16:06:55] Running /usr/bin/apptainer --version
[2025-11-30 16:06:55] apptainer version 1.3.2-1.el7
[2025-11-30 16:06:55] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 16:06:56] c-205-30.aglt2.org
[2025-11-30 16:06:56] apptainer works
[2025-11-30 16:06:56] Set ATHENA_PROC_NUMBER=12
[2025-11-30 16:06:56] Set ATHENA_CORE_NUMBER=12
[2025-11-30 16:06:56] Starting ATLAS job with PandaID=6893851355
[2025-11-30 16:06:56] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 23:18:05]  *** The last 200 lines of the pilot log: ***
[2025-11-30 23:18:05] 2025-12-01 04:17:48,568 | INFO     | time since job start (25837s) is within the limit (172800.0s)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,574 | INFO     | time since job start (25839s) is within the limit (172800.0s)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,656 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 23:18:05] 2025-12-01 04:17:50,659 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1684.75
[2025-11-30 23:18:05] 2025-12-01 04:17:50,661 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893851355/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,661 | INFO     | extracted standard info from prmon json
[2025-11-30 23:18:05] 2025-12-01 04:17:50,662 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 23:18:05] 2025-12-01 04:17:50,662 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 23:18:05] 2025-12-01 04:17:50,668 | INFO     | fitting pss+swap vs Time
[2025-11-30 23:18:05] 2025-12-01 04:17:50,669 | INFO     | sum of square deviations: 23469495692.34522
[2025-11-30 23:18:05] 2025-12-01 04:17:50,673 | INFO     | sum of deviations: 405149960277.2487
[2025-11-30 23:18:05] 2025-12-01 04:17:50,673 | INFO     | mean x: 1764549731.1796691
[2025-11-30 23:18:05] 2025-12-01 04:17:50,673 | INFO     | mean y: 3416344.7730496456
[2025-11-30 23:18:05] 2025-12-01 04:17:50,673 | INFO     | intersect: -30457709146.212513
[2025-11-30 23:18:05] 2025-12-01 04:17:50,673 | INFO     | chi2: 5.854796862385483
[2025-11-30 23:18:05] 2025-12-01 04:17:50,674 | INFO     | sum of square deviations: 22647075544.68175
[2025-11-30 23:18:05] 2025-12-01 04:17:50,674 | INFO     | monitor loop #1939: job 0:6893851355 is in state 'finished'
[2025-11-30 23:18:05] 2025-12-01 04:17:50,678 | INFO     | sum of deviations: 556402249453.4548
[2025-11-30 23:18:05] 2025-12-01 04:17:50,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,679 | INFO     | mean x: 1764549578.6818182
[2025-11-30 23:18:05] 2025-12-01 04:17:50,679 | INFO     | mean y: 3444359.6650717705
[2025-11-30 23:18:05] 2025-12-01 04:17:50,679 | INFO     | intersect: -43348702936.95431
[2025-11-30 23:18:05] 2025-12-01 04:17:50,680 | INFO     | chi2: 3.137846941904871
[2025-11-30 23:18:05] 2025-12-01 04:17:50,680 | INFO     | current chi2=3.137846941904871 (change=46.4055369356336 %)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,680 | INFO     | sum of square deviations: 21844097622.014614
[2025-11-30 23:18:05] 2025-12-01 04:17:50,684 | INFO     | sum of deviations: 608581584204.416
[2025-11-30 23:18:05] 2025-12-01 04:17:50,684 | INFO     | mean x: 1764549426.1840193
[2025-11-30 23:18:05] 2025-12-01 04:17:50,684 | INFO     | mean y: 3454226.9418886197
[2025-11-30 23:18:05] 2025-12-01 04:17:50,684 | INFO     | intersect: -49157298658.1674
[2025-11-30 23:18:05] 2025-12-01 04:17:50,685 | INFO     | chi2: 2.5876001220939995
[2025-11-30 23:18:05] 2025-12-01 04:17:50,685 | INFO     | current chi2=2.5876001220939995 (change=17.535808151204378 %)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,685 | INFO     | right removable region: 412
[2025-11-30 23:18:05] 2025-12-01 04:17:50,686 | INFO     | sum of square deviations: 22647029184.681763
[2025-11-30 23:18:05] 2025-12-01 04:17:50,690 | INFO     | sum of deviations: 261890688277.86353
[2025-11-30 23:18:05] 2025-12-01 04:17:50,690 | INFO     | mean x: 1764549883.6818182
[2025-11-30 23:18:05] 2025-12-01 04:17:50,690 | INFO     | mean y: 3442832.600478469
[2025-11-30 23:18:05] 2025-12-01 04:17:50,690 | INFO     | intersect: -20401846522.11226
[2025-11-30 23:18:05] 2025-12-01 04:17:50,691 | INFO     | chi2: 3.450566754830702
[2025-11-30 23:18:05] 2025-12-01 04:17:50,691 | INFO     | current chi2=3.450566754830702 (change=41.06427881385452 %)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,691 | INFO     | sum of square deviations: 21844030277.380142
[2025-11-30 23:18:05] 2025-12-01 04:17:50,695 | INFO     | sum of deviations: 230346863627.2204
[2025-11-30 23:18:05] 2025-12-01 04:17:50,695 | INFO     | mean x: 1764550036.181598
[2025-11-30 23:18:05] 2025-12-01 04:17:50,695 | INFO     | mean y: 3448816.4237288134
[2025-11-30 23:18:05] 2025-12-01 04:17:50,695 | INFO     | intersect: -18603857682.71732
[2025-11-30 23:18:05] 2025-12-01 04:17:50,696 | INFO     | chi2: 3.404760336424142
[2025-11-30 23:18:05] 2025-12-01 04:17:50,696 | INFO     | current chi2=3.404760336424142 (change=1.3275041945626043 %)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,696 | INFO     | left removable region: 20
[2025-11-30 23:18:05] 2025-12-01 04:17:50,697 | INFO     | sum of square deviations: 18678515186.030567
[2025-11-30 23:18:05] 2025-12-01 04:17:50,700 | INFO     | sum of deviations: 376282149875.3363
[2025-11-30 23:18:05] 2025-12-01 04:17:50,700 | INFO     | mean x: 1764550005.6887755
[2025-11-30 23:18:05] 2025-12-01 04:17:50,700 | INFO     | mean y: 3499317.076530612
[2025-11-30 23:18:05] 2025-12-01 04:17:50,700 | INFO     | intersect: -35543687549.237305
[2025-11-30 23:18:05] 2025-12-01 04:17:50,701 | INFO     | chi2: 0.06466697265132065
[2025-11-30 23:18:05] 2025-12-01 04:17:50,701 | INFO     | current memory leak: 20.15 B/s (using 392 data points, chi2=0.06)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,701 | INFO     | could have reported an average CPU frequency of 2371 MHz (18 samples)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,701 | INFO     | ..............................
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . Timing measurements:
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . get job = 0 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . initial setup = 2 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . payload setup = 7 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . stage-in = 0 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . payload execution = 25802 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . stage-out = 3 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | . log creation = 0 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,702 | INFO     | ..............................
[2025-11-30 23:18:05] 2025-12-01 04:17:50,783 | INFO     | 
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | job summary report
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | --------------------------------------------------
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | PanDA job id: 6893851355
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | task id: 47523449
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | errors: (none)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,784 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | pilot state: finished 
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | transexitcode: 0
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | exeerrorcode: 0
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | exeerrordiag: 
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | exitcode: 0
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | exitmsg: OK
[2025-11-30 23:18:05] 2025-12-01 04:17:50,785 | INFO     | cpuconsumptiontime: 294966 s
[2025-11-30 23:18:05] 2025-12-01 04:17:50,786 | INFO     | nevents: 1000
[2025-11-30 23:18:05] 2025-12-01 04:17:50,786 | INFO     | neventsw: 0
[2025-11-30 23:18:05] 2025-12-01 04:17:50,786 | INFO     | pid: 27230
[2025-11-30 23:18:05] 2025-12-01 04:17:50,786 | INFO     | pgrp: 27230
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | corecount: 12
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | event service: False
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | sizes: {0: 2283487, 1: 2284343, 6: 2284605, 12: 2284633, 25814: 2321898, 25817: 2331076, 25824: 2331266}
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | --------------------------------------------------
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | 
[2025-11-30 23:18:05] 2025-12-01 04:17:50,787 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 23:18:05] 2025-12-01 04:17:50,812 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,812 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,812 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,812 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,812 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,813 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,814 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,815 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,815 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 23:18:05] 2025-12-01 04:17:50,815 | INFO     | job 6893851355 has completed (purged errors)
[2025-11-30 23:18:05] 2025-12-01 04:17:50,815 | INFO     | overall cleanup function is called
[2025-11-30 23:18:05] 2025-12-01 04:17:51,832 | INFO     | --- collectZombieJob: --- 10, [27230]
[2025-11-30 23:18:05] 2025-12-01 04:17:51,832 | INFO     | zombie collector waiting for pid 27230
[2025-11-30 23:18:05] 2025-12-01 04:17:51,832 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 23:18:05] 2025-12-01 04:17:51,832 | INFO     | collected zombie processes
[2025-11-30 23:18:05] 2025-12-01 04:17:51,832 | INFO     | will attempt to kill all subprocesses of pid=27230
[2025-11-30 23:18:05] 2025-12-01 04:17:51,925 | INFO     | process IDs to be killed: [27230] (in reverse order)
[2025-11-30 23:18:05] 2025-12-01 04:17:51,976 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 23:18:05] 2025-12-01 04:17:51,977 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 23:18:05] 2025-12-01 04:17:51,980 | INFO     | did not find any defunct processes belonging to 27230
[2025-11-30 23:18:05] 2025-12-01 04:17:51,982 | INFO     | did not find any defunct processes belonging to 27230
[2025-11-30 23:18:05] 2025-12-01 04:17:51,984 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 23:18:05] 2025-12-01 04:17:51,985 | INFO     | ready for new job
[2025-11-30 23:18:05] 2025-12-01 04:17:51,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 23:18:05] 2025-12-01 04:17:51,987 | INFO     | ***************************************
[2025-11-30 23:18:05] 2025-12-01 04:17:51,987 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 23:18:05] 2025-12-01 04:17:51,987 | INFO     | ***************************************
[2025-11-30 23:18:05] 2025-12-01 04:17:51,987 | INFO     | 
[2025-11-30 23:18:05] 2025-12-01 04:17:51,988 | INFO     | architecture information:
[2025-11-30 23:18:05] 2025-12-01 04:17:51,988 | INFO     | executing command: cat /etc/os-release
[2025-11-30 23:18:05] 2025-12-01 04:17:52,004 | INFO     | cat /etc/os-release:
[2025-11-30 23:18:05] NAME="CentOS Linux"
[2025-11-30 23:18:05] VERSION="7 (Core)"
[2025-11-30 23:18:05] ID="centos"
[2025-11-30 23:18:05] ID_LIKE="rhel fedora"
[2025-11-30 23:18:05] VERSION_ID="7"
[2025-11-30 23:18:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 23:18:05] ANSI_COLOR="0;31"
[2025-11-30 23:18:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 23:18:05] HOME_URL="https://www.centos.org/"
[2025-11-30 23:18:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 23:18:05] 
[2025-11-30 23:18:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 23:18:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 23:18:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 23:18:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 23:18:05] 
[2025-11-30 23:18:05] 2025-12-01 04:17:52,004 | INFO     | ***************************************
[2025-11-30 23:18:05] 2025-12-01 04:17:52,507 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 23:18:05] 2025-12-01 04:17:52,523 | INFO     | sufficient remaining disk space (28245491712 B)
[2025-11-30 23:18:05] 2025-12-01 04:17:52,523 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 23:18:05] 2025-12-01 04:17:52,523 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 23:18:05] 2025-12-01 04:17:52,523 | INFO     | update_server=False
[2025-11-30 23:18:05] 2025-12-01 04:17:52,523 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 23:18:05] 2025-12-01 04:17:52,524 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 23:18:05] 2025-12-01 04:17:52,524 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 23:18:05] 2025-12-01 04:17:52,525 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 23:18:05] 2025-12-01 04:17:52,525 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 23:18:05] 2025-12-01 04:17:52,525 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 23:18:05] 2025-12-01 04:17:52,525 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:18:05] 2025-12-01 04:17:52,525 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:18:05] 2025-12-01 04:17:52,526 | INFO     | aborting loop
[2025-11-30 23:18:05] 2025-12-01 04:17:52,959 | INFO     | all payload control threads have been joined
[2025-11-30 23:18:05] 2025-12-01 04:17:53,096 | INFO     | all job control threads have been joined
[2025-11-30 23:18:05] 2025-12-01 04:17:53,260 | INFO     | [monitor] cgroup control has ended
[2025-11-30 23:18:05] 2025-12-01 04:17:53,372 | INFO     | all data control threads have been joined
[2025-11-30 23:18:05] 2025-12-01 04:17:53,529 | INFO     | [job] retrieve thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:53,531 | INFO     | [job] queue monitor thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:53,532 | INFO     | [job] job monitor thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:53,960 | INFO     | [payload] control thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,101 | INFO     | [job] control thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,332 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,332 | INFO     | [payload] validate_post thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,377 | INFO     | [data] control thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,516 | INFO     | [job] validate thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,531 | INFO     | [data] copytool_out thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,644 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 23:18:05] 2025-12-01 04:17:54,876 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,886 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,931 | INFO     | [data] copytool_in thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,947 | INFO     | [payload] failed_post thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:54,949 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:58,650 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 23:18:05] 2025-12-01 04:17:59,751 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139686040454976)>', '<ExcThread(monitor, started 139685573662464)>']
[2025-11-30 23:18:05] 2025-12-01 04:18:00,559 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 23:18:05] 2025-12-01 04:18:00,559 | INFO     | [monitor] control thread has ended
[2025-11-30 23:18:05] 2025-12-01 04:18:04,774 | INFO     | all workflow threads have been joined
[2025-11-30 23:18:05] 2025-12-01 04:18:04,774 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 23:18:05] 2025-12-01 04:18:04,774 | INFO     | traces error code: 0
[2025-11-30 23:18:05] 2025-12-01 04:18:04,775 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 23:18:05] 2025-12-01 04:18:04,857 [wrapper] ==== pilot stdout END ====
[2025-11-30 23:18:05] 2025-12-01 04:18:04,861 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 23:18:05] 2025-12-01 04:18:04,865 [wrapper] pilotpid: 20864
[2025-11-30 23:18:05] 2025-12-01 04:18:04,869 [wrapper] Pilot exit status: 0
[2025-11-30 23:18:05] 2025-12-01 04:18:04,883 [wrapper] pandaids: 6893851355
[2025-11-30 23:18:05] 2025-12-01 04:18:04,921 [wrapper] cleanup supervisor_pilot 23217 20865
[2025-11-30 23:18:05] 2025-12-01 04:18:04,925 [wrapper] Test setup, not cleaning
[2025-11-30 23:18:05] 2025-12-01 04:18:04,929 [wrapper] apfmon messages muted
[2025-11-30 23:18:05] 2025-12-01 04:18:04,933 [wrapper] ==== wrapper stdout END ====
[2025-11-30 23:18:05] 2025-12-01 04:18:04,936 [wrapper] ==== wrapper stderr END ====
[2025-11-30 23:18:05]  *** Error codes and diagnostics ***
[2025-11-30 23:18:05]     "exeErrorCode": 0,
[2025-11-30 23:18:05]     "exeErrorDiag": "",
[2025-11-30 23:18:05]     "pilotErrorCode": 0,
[2025-11-30 23:18:05]     "pilotErrorDiag": "",
[2025-11-30 23:18:05]  *** Listing of results directory ***
[2025-11-30 23:18:05] total 1310552
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-30 23:18:05] -rwx------ 1 boincer umatlas     36292 Nov 20 06:43 runpilot2-wrapper.sh
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:43 queuedata.json
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas       100 Nov 30 16:06 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 23:18:05] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 16:06 run_atlas
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas       105 Nov 30 16:06 job.xml
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas 411840891 Nov 30 16:06 EVNT.47493127._000358.pool.root.1
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 16:06 start_atlas.sh
[2025-11-30 23:18:05] drwxrwx--x 2 boincer umatlas      4096 Nov 30 16:06 shared
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas    590098 Nov 30 16:06 input.tar.gz
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas         0 Nov 30 16:06 boinc_lockfile
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas      2786 Nov 30 16:06 pandaJob.out
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas        57 Nov 30 16:06 setup.sh.local
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas    993245 Nov 30 16:07 agis_schedconf.cvmfs.json
[2025-11-30 23:18:05] drwx------ 5 boincer umatlas      4096 Nov 30 16:07 pilot3
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas       533 Nov 30 23:06 boinc_task_state.xml
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas      5955 Nov 30 23:11 init_data.xml
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas 914607008 Nov 30 23:17 HITS.47523449._003573.pool.root.1
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas        95 Nov 30 23:17 pilot_heartbeat.json
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 23:17 boinc_mmap_file
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas        29 Nov 30 23:17 wrapper_checkpoint.txt
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas      1064 Nov 30 23:17 memory_monitor_summary.json
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas   1516240 Nov 30 23:17 agis_ddmendpoints.agis.ALL.json
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas   2185819 Nov 30 23:17 log.47523449._003573.job.log.tgz.1
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas      8663 Nov 30 23:17 heartbeat.json
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas      4552 Nov 30 23:18 pilotlog.txt
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas   3633723 Nov 30 23:18 log.47523449._003573.job.log.1
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas       353 Nov 30 23:18 output.list
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas       620 Nov 30 23:18 runtime_log
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas   5836800 Nov 30 23:18 result.tar.gz
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas      9345 Nov 30 23:18 runtime_log.err
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas       670 Nov 30 23:18 e1QNDmUFIg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmweHKDmyJjAMm.diag
[2025-11-30 23:18:05] -rw-r--r-- 1 boincer umatlas     21227 Nov 30 23:18 stderr.txt
[2025-11-30 23:18:05] HITS file was successfully produced:
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas 914607008 Nov 30 23:17 shared/HITS.pool.root.1
[2025-11-30 23:18:05]  *** Contents of shared directory: ***
[2025-11-30 23:18:05] total 1301664
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas 411840891 Nov 30 16:06 ATLAS.root_0
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 16:06 start_atlas.sh
[2025-11-30 23:18:05] -rw-r--r-- 2 boincer umatlas    590098 Nov 30 16:06 input.tar.gz
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas 914607008 Nov 30 23:17 HITS.pool.root.1
[2025-11-30 23:18:05] -rw------- 1 boincer umatlas   5836800 Nov 30 23:18 result.tar.gz
23:18:06 (17142): run_atlas exited; CPU time 287346.261601
23:18:06 (17142): called boinc_finish(0)

</stderr_txt>
]]>

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