Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:43:35 (1897006): wrapper (7.7.26015): starting
13:43:35 (1897006): wrapper: running run_atlas (--nthreads 4)
[2025-11-30 13:43:35] Arguments: --nthreads 4
[2025-11-30 13:43:35] Threads: 4
[2025-11-30 13:43:35] Checking for CVMFS
[2025-11-30 13:43:36] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 13:43:36] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 13:43:36] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 13:43:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 13:43:36] 2.13.2.0 439692 10347 66848 153493 2 80 3811450 4096000 5130 130560 0 29316184 99.927 2134597 841 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-30 13:43:36] CVMFS is ok
[2025-11-30 13:43:36] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 13:43:36] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-30 13:43:36] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-30 13:43:36] Further information can be found at the LHC@home message board.
[2025-11-30 13:43:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 13:43:36] Checking for apptainer binary...
[2025-11-30 13:43:36] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 13:43:36] Running /usr/bin/apptainer --version
[2025-11-30 13:43:36] apptainer version 1.4.3
[2025-11-30 13:43:36] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 13:43:36] b650riptide
[2025-11-30 13:43:36] apptainer works
[2025-11-30 13:43:36] Set ATHENA_PROC_NUMBER=4
[2025-11-30 13:43:36] Set ATHENA_CORE_NUMBER=4
[2025-11-30 13:43:36] Starting ATLAS job with PandaID=6894246549
[2025-11-30 13:43:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 21:04:32]  *** The last 200 lines of the pilot log: ***
[2025-11-30 21:04:32] 2025-12-01 04:03:51,777 | INFO     | monitor loop #1996: job 0:6894246549 is in state 'finished'
[2025-11-30 21:04:32] 2025-12-01 04:03:51,777 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,220 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-30 21:04:32] 2025-12-01 04:03:52,222 | INFO     | found 16 cores (16 cores per socket, 1 socket) HT, CPU MHz: 4643.708625000001
[2025-11-30 21:04:32] 2025-12-01 04:03:52,225 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6894246549/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,226 | INFO     | extracted standard info from prmon json
[2025-11-30 21:04:32] 2025-12-01 04:03:52,226 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 21:04:32] 2025-12-01 04:03:52,226 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 21:04:32] 2025-12-01 04:03:52,229 | INFO     | fitting pss+swap vs Time
[2025-11-30 21:04:32] 2025-12-01 04:03:52,229 | INFO     | sum of square deviations: 25173279432.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,231 | INFO     | sum of deviations: 130687623110.99998
[2025-11-30 21:04:32] 2025-12-01 04:03:52,231 | INFO     | mean x: 1764548617.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,231 | INFO     | mean y: 2262442.2263279445
[2025-11-30 21:04:32] 2025-12-01 04:03:52,231 | INFO     | intersect: -9158429760.887665
[2025-11-30 21:04:32] 2025-12-01 04:03:52,231 | INFO     | chi2: 2.5682898943458863
[2025-11-30 21:04:32] 2025-12-01 04:03:52,232 | INFO     | sum of square deviations: 24311253967.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | sum of deviations: 175134284392.5
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | mean x: 1764548464.5
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | mean y: 2270259.3341121497
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | intersect: -12709247337.642673
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | chi2: 1.6842278916663835
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | current chi2=1.6842278916663835 (change=34.42220462050539 %)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,234 | INFO     | sum of square deviations: 23469135852.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,236 | INFO     | sum of deviations: 170281108745.99997
[2025-11-30 21:04:32] 2025-12-01 04:03:52,236 | INFO     | mean x: 1764548312.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,236 | INFO     | mean y: 2269380.5082742316
[2025-11-30 21:04:32] 2025-12-01 04:03:52,236 | INFO     | intersect: -12800470562.625898
[2025-11-30 21:04:32] 2025-12-01 04:03:52,237 | INFO     | chi2: 1.6845221352903403
[2025-11-30 21:04:32] 2025-12-01 04:03:52,237 | INFO     | current chi2=1.6845221352903403 (change=-0.017470535039392818 %)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,237 | INFO     | right removable region: 422
[2025-11-30 21:04:32] 2025-12-01 04:03:52,237 | INFO     | sum of square deviations: 24311253967.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | sum of deviations: 63950147879.999985
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | mean x: 1764548769.5
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | mean y: 2274189.1542056073
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | intersect: -4639327387.801466
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | chi2: 0.9514116857334783
[2025-11-30 21:04:32] 2025-12-01 04:03:52,239 | INFO     | current chi2=0.9514116857334783 (change=62.955440200577826 %)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,240 | INFO     | sum of square deviations: 23469135852.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | sum of deviations: 62258706025.000046
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | mean x: 1764548922.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | mean y: 2274494.4680851065
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | intersect: -4678704528.121994
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | chi2: 0.9510458166958815
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | current chi2=0.9510458166958815 (change=0.03845538614703595 %)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | left removable region: 20
[2025-11-30 21:04:32] 2025-12-01 04:03:52,242 | INFO     | sum of square deviations: 20144379560.5
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | sum of deviations: 102900735056.0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | mean x: 1764548891.5
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | mean y: 2281489.5572139304
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | intersect: -9011318429.580389
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | chi2: 0.046926352562538555
[2025-11-30 21:04:32] 2025-12-01 04:03:52,244 | INFO     | current memory leak: 5.11 B/s (using 402 data points, chi2=0.05)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | could have reported an average CPU frequency of 4569 MHz (18 samples)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | ..............................
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . Timing measurements:
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . get job = 0 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . initial setup = 2 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . payload setup = 2 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . stage-in = 0 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . payload execution = 26380 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . stage-out = 2 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | . log creation = 0 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,245 | INFO     | ..............................
[2025-11-30 21:04:32] 2025-12-01 04:03:52,640 | INFO     | 
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | job summary report
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | --------------------------------------------------
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | PanDA job id: 6894246549
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | task id: 47533962
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | errors: (none)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | pilot state: finished 
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | transexitcode: 0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | exeerrorcode: 0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | exeerrordiag: 
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | exitcode: 0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | exitmsg: OK
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | cpuconsumptiontime: 104593 s
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | nevents: 1000
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | neventsw: 0
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | pid: 1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | pgrp: 1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | corecount: 4
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | event service: False
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | sizes: {0: 2284322, 2: 2284584, 11: 2284612, 26386: 2322162, 26390: 2331170, 26392: 2331254, 26396: 2331628}
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | --------------------------------------------------
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | 
[2025-11-30 21:04:32] 2025-12-01 04:03:52,641 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,654 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | job 6894246549 has completed (purged errors)
[2025-11-30 21:04:32] 2025-12-01 04:03:52,655 | INFO     | overall cleanup function is called
[2025-11-30 21:04:32] 2025-12-01 04:03:53,665 | INFO     | --- collectZombieJob: --- 10, [1907536]
[2025-11-30 21:04:32] 2025-12-01 04:03:53,665 | INFO     | zombie collector waiting for pid 1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:53,665 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 21:04:32] 2025-12-01 04:03:53,665 | INFO     | collected zombie processes
[2025-11-30 21:04:32] 2025-12-01 04:03:53,665 | INFO     | will attempt to kill all subprocesses of pid=1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:53,752 | INFO     | process IDs to be killed: [1907536] (in reverse order)
[2025-11-30 21:04:32] 2025-12-01 04:03:53,789 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 21:04:32] 2025-12-01 04:03:53,789 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 21:04:32] 2025-12-01 04:03:53,792 | INFO     | did not find any defunct processes belonging to 1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:53,795 | INFO     | did not find any defunct processes belonging to 1907536
[2025-11-30 21:04:32] 2025-12-01 04:03:53,795 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 21:04:32] 2025-12-01 04:03:53,796 | INFO     | ready for new job
[2025-11-30 21:04:32] 2025-12-01 04:03:53,796 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 21:04:32] 2025-12-01 04:03:53,797 | INFO     | ***************************************
[2025-11-30 21:04:32] 2025-12-01 04:03:53,797 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 21:04:32] 2025-12-01 04:03:53,797 | INFO     | ***************************************
[2025-11-30 21:04:32] 2025-12-01 04:03:53,797 | INFO     | 
[2025-11-30 21:04:32] 2025-12-01 04:03:53,798 | INFO     | architecture information:
[2025-11-30 21:04:32] 2025-12-01 04:03:53,798 | INFO     | executing command: cat /etc/os-release
[2025-11-30 21:04:32] 2025-12-01 04:03:53,808 | INFO     | cat /etc/os-release:
[2025-11-30 21:04:32] NAME="CentOS Linux"
[2025-11-30 21:04:32] VERSION="7 (Core)"
[2025-11-30 21:04:32] ID="centos"
[2025-11-30 21:04:32] ID_LIKE="rhel fedora"
[2025-11-30 21:04:32] VERSION_ID="7"
[2025-11-30 21:04:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 21:04:32] ANSI_COLOR="0;31"
[2025-11-30 21:04:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 21:04:32] HOME_URL="https://www.centos.org/"
[2025-11-30 21:04:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 21:04:32] 
[2025-11-30 21:04:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 21:04:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 21:04:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 21:04:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 21:04:32] 
[2025-11-30 21:04:32] 2025-12-01 04:03:53,808 | INFO     | ***************************************
[2025-11-30 21:04:32] 2025-12-01 04:03:54,310 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2025-11-30 21:04:32] 2025-12-01 04:03:54,321 | INFO     | sufficient remaining disk space (240942841856 B)
[2025-11-30 21:04:32] 2025-12-01 04:03:54,321 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 21:04:32] 2025-12-01 04:03:54,321 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 21:04:32] 2025-12-01 04:03:54,321 | INFO     | update_server=False
[2025-11-30 21:04:32] 2025-12-01 04:03:54,321 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 21:04:32] 2025-12-01 04:03:54,322 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 21:04:32] 2025-12-01 04:03:54,322 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 21:04:32] 2025-12-01 04:03:54,525 | INFO     | all payload control threads have been joined
[2025-11-30 21:04:32] 2025-12-01 04:03:55,285 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:04:32] 2025-12-01 04:03:55,285 | INFO     | aborting loop
[2025-11-30 21:04:32] 2025-12-01 04:03:55,299 | INFO     | all data control threads have been joined
[2025-11-30 21:04:32] 2025-12-01 04:03:55,322 | INFO     | [job] retrieve thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:55,359 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:55,531 | INFO     | [payload] control thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:55,815 | INFO     | [payload] validate_post thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:55,825 | INFO     | all job control threads have been joined
[2025-11-30 21:04:32] 2025-12-01 04:03:55,896 | INFO     | [payload] failed_post thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,288 | INFO     | [data] copytool_in thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,289 | INFO     | [job] job monitor thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,303 | INFO     | [data] control thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,327 | INFO     | [data] copytool_out thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,470 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,565 | INFO     | [job] validate thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,791 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:56,830 | INFO     | [job] control thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:57,295 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 21:04:32] 2025-12-01 04:03:58,299 | INFO     | [job] queue monitor thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:03:58,327 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:04:04,690 | INFO     | job.realtimelogging is not enabled
[2025-11-30 21:04:32] 2025-12-01 04:04:05,695 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 21:04:32] 2025-12-01 04:04:24,780 | INFO     | PID=1900863 has CPU usage=3.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 21:04:32] 2025-12-01 04:04:24,781 | INFO     | .. there are 7 such processes running
[2025-11-30 21:04:32] 2025-12-01 04:04:24,781 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 21:04:32] 2025-12-01 04:04:24,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 21:04:32] 2025-12-01 04:04:24,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 21:04:32] 2025-12-01 04:04:25,957 | INFO     | [monitor] cgroup control has ended
[2025-11-30 21:04:32] 2025-12-01 04:04:27,512 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 131134448211776)>', '<ExcThread(monitor, started 131133874370304)>']
[2025-11-30 21:04:32] 2025-12-01 04:04:27,796 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 21:04:32] 2025-12-01 04:04:27,796 | INFO     | [monitor] control thread has ended
[2025-11-30 21:04:32] 2025-12-01 04:04:32,521 | INFO     | all workflow threads have been joined
[2025-11-30 21:04:32] 2025-12-01 04:04:32,521 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 21:04:32] 2025-12-01 04:04:32,521 | INFO     | traces error code: 0
[2025-11-30 21:04:32] 2025-12-01 04:04:32,522 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 21:04:32] 2025-12-01 04:04:32,575 [wrapper] ==== pilot stdout END ====
[2025-11-30 21:04:32] 2025-12-01 04:04:32,577 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 21:04:32] 2025-12-01 04:04:32,578 [wrapper] pilotpid: 1900863
[2025-11-30 21:04:32] 2025-12-01 04:04:32,579 [wrapper] Pilot exit status: 0
[2025-11-30 21:04:32] 2025-12-01 04:04:32,584 [wrapper] pandaids: 6894246549
[2025-11-30 21:04:32] 2025-12-01 04:04:32,609 [wrapper] cleanup supervisor_pilot 2304534 1900864
[2025-11-30 21:04:32] 2025-12-01 04:04:32,610 [wrapper] Test setup, not cleaning
[2025-11-30 21:04:32] 2025-12-01 04:04:32,612 [wrapper] apfmon messages muted
[2025-11-30 21:04:32] 2025-12-01 04:04:32,613 [wrapper] ==== wrapper stdout END ====
[2025-11-30 21:04:32] 2025-12-01 04:04:32,614 [wrapper] ==== wrapper stderr END ====
[2025-11-30 21:04:32]  *** Error codes and diagnostics ***
[2025-11-30 21:04:32]     "exeErrorCode": 0,
[2025-11-30 21:04:32]     "exeErrorDiag": "",
[2025-11-30 21:04:32]     "pilotErrorCode": 0,
[2025-11-30 21:04:32]     "pilotErrorDiag": "",
[2025-11-30 21:04:32]  *** Listing of results directory ***
[2025-11-30 21:04:32] total 1304088
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc    576529 Nov 26 18:09 pilot3.tar.gz
[2025-11-30 21:04:32] -rwx------ 1 boinc boinc     36292 Nov 26 18:28 runpilot2-wrapper.sh
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc      5112 Nov 26 18:31 queuedata.json
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc       100 Nov 30 13:43 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 21:04:32] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 13:43 run_atlas
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc       105 Nov 30 13:43 job.xml
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:43 start_atlas.sh
[2025-11-30 21:04:32] drwxrwx--x 2 boinc boinc      4096 Nov 30 13:43 shared
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc    590106 Nov 30 13:43 input.tar.gz
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc      9986 Nov 30 13:43 init_data.xml
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc 409802439 Nov 30 13:43 EVNT.47493127._001027.pool.root.1
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc         0 Nov 30 13:43 boinc_lockfile
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc      2787 Nov 30 13:43 pandaJob.out
[2025-11-30 21:04:32] -rw------- 1 boinc boinc    993245 Nov 30 13:43 agis_schedconf.cvmfs.json
[2025-11-30 21:04:32] drwx------ 5 boinc boinc      4096 Nov 30 13:43 pilot3
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc       532 Nov 30 21:00 boinc_task_state.xml
[2025-11-30 21:04:32] -rw------- 1 boinc boinc 911472544 Nov 30 21:03 HITS.47533962._000268.pool.root.1
[2025-11-30 21:04:32] -rw------- 1 boinc boinc      1030 Nov 30 21:03 memory_monitor_summary.json
[2025-11-30 21:04:32] -rw------- 1 boinc boinc   1516240 Nov 30 21:03 agis_ddmendpoints.agis.ALL.json
[2025-11-30 21:04:32] -rw------- 1 boinc boinc   1270362 Nov 30 21:03 log.47533962._000268.job.log.tgz.1
[2025-11-30 21:04:32] -rw------- 1 boinc boinc      8550 Nov 30 21:03 heartbeat.json
[2025-11-30 21:04:32] -rw------- 1 boinc boinc        95 Nov 30 21:04 pilot_heartbeat.json
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc        29 Nov 30 21:04 wrapper_checkpoint.txt
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc      8192 Nov 30 21:04 boinc_mmap_file
[2025-11-30 21:04:32] -rw------- 1 boinc boinc      4903 Nov 30 21:04 pilotlog.txt
[2025-11-30 21:04:32] -rw------- 1 boinc boinc   3824420 Nov 30 21:04 log.47533962._000268.job.log.1
[2025-11-30 21:04:32] -rw------- 1 boinc boinc       353 Nov 30 21:04 output.list
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc       620 Nov 30 21:04 runtime_log
[2025-11-30 21:04:32] -rw------- 1 boinc boinc   5109760 Nov 30 21:04 result.tar.gz
[2025-11-30 21:04:32] -rw------- 1 boinc boinc       665 Nov 30 21:04 zrWKDmmzfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmFeNKDmkEGW2m.diag
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc      8940 Nov 30 21:04 runtime_log.err
[2025-11-30 21:04:32] -rw-r--r-- 1 boinc boinc     21329 Nov 30 21:04 stderr.txt
[2025-11-30 21:04:32] HITS file was successfully produced:
[2025-11-30 21:04:32] -rw------- 1 boinc boinc 911472544 Nov 30 21:03 shared/HITS.pool.root.1
[2025-11-30 21:04:32]  *** Contents of shared directory: ***
[2025-11-30 21:04:32] total 1295908
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:43 start_atlas.sh
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc    590106 Nov 30 13:43 input.tar.gz
[2025-11-30 21:04:32] -rw-r--r-- 2 boinc boinc 409802439 Nov 30 13:43 ATLAS.root_0
[2025-11-30 21:04:32] -rw------- 1 boinc boinc 911472544 Nov 30 21:03 HITS.pool.root.1
[2025-11-30 21:04:32] -rw------- 1 boinc boinc   5109760 Nov 30 21:04 result.tar.gz
21:04:33 (1897006): run_atlas exited; CPU time 104628.136361
21:04:33 (1897006): called boinc_finish(0)

</stderr_txt>
]]>

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