Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:31:45 (20528): wrapper (7.7.26015): starting
15:31:45 (20528): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 15:31:45] Arguments: --nthreads 8
[2025-12-02 15:31:45] Threads: 8
[2025-12-02 15:31:45] Checking for CVMFS
[2025-12-02 15:31:46] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 15:31:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 15:31:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 15:31:48] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 15:31:48] 2.11.2.0 4250 91641 91588 153550 2 85 15989544 25165824 2554 130560 19 25933771 99.886 15753348 1651 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-02 15:31:48] CVMFS is ok
[2025-12-02 15:31:48] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 15:31:48] Checking for apptainer binary...
[2025-12-02 15:31:48] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 15:31:48] Running /usr/bin/apptainer --version
[2025-12-02 15:31:48] apptainer version 1.3.2-1.el7
[2025-12-02 15:31:48] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 15:32:04] cg-vwn215.simple-grid.lan
[2025-12-02 15:32:04] apptainer works
[2025-12-02 15:32:04] Set ATHENA_PROC_NUMBER=8
[2025-12-02 15:32:04] Set ATHENA_CORE_NUMBER=8
[2025-12-02 15:32:04] Starting ATLAS job with PandaID=6893860258
[2025-12-02 15:32:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 15:36:22]  *** The last 200 lines of the pilot log: ***
[2025-12-03 15:36:22] 2025-12-03 14:35:35,505 | INFO     | time since job start (86412s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:36,057 | INFO     | monitor loop #5791: job 0:6893860258 is in state 'finished'
[2025-12-03 15:36:22] 2025-12-03 14:35:36,057 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 15:36:22] 2025-12-03 14:35:37,518 | INFO     | time since job start (86414s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:38,562 | INFO     | monitor loop #5792: job 0:6893860258 is in state 'finished'
[2025-12-03 15:36:22] 2025-12-03 14:35:38,562 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 15:36:22] 2025-12-03 14:35:39,525 | INFO     | time since job start (86416s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:41,067 | INFO     | monitor loop #5793: job 0:6893860258 is in state 'finished'
[2025-12-03 15:36:22] 2025-12-03 14:35:41,067 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 15:36:22] 2025-12-03 14:35:41,533 | INFO     | time since job start (86418s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:43,539 | INFO     | time since job start (86420s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:43,573 | INFO     | monitor loop #5794: job 0:6893860258 is in state 'finished'
[2025-12-03 15:36:22] 2025-12-03 14:35:43,573 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,339 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 15:36:22] 2025-12-03 14:35:45,340 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-03 15:36:22] 2025-12-03 14:35:45,342 | INFO     | using path: /var/lib/boinc/slots/15/PanDA_Pilot-6893860258/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,343 | INFO     | extracted standard info from prmon json
[2025-12-03 15:36:22] 2025-12-03 14:35:45,343 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 15:36:22] 2025-12-03 14:35:45,343 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 15:36:22] 2025-12-03 14:35:45,369 | INFO     | fitting pss+swap vs Time
[2025-12-03 15:36:22] 2025-12-03 14:35:45,371 | INFO     | sum of square deviations: 869230210592.6954
[2025-12-03 15:36:22] 2025-12-03 14:35:45,428 | INFO     | sum of deviations: 2449212891932.1323
[2025-12-03 15:36:22] 2025-12-03 14:35:45,429 | INFO     | mean x: 1764729521.6404254
[2025-12-03 15:36:22] 2025-12-03 14:35:45,429 | INFO     | mean y: 2860751.309929078
[2025-12-03 15:36:22] 2025-12-03 14:35:45,429 | INFO     | intersect: -4969582960.957975
[2025-12-03 15:36:22] 2025-12-03 14:35:45,431 | INFO     | chi2: 14.805868000102427
[2025-12-03 15:36:22] 2025-12-03 14:35:45,433 | INFO     | sum of square deviations: 860016305003.6696
[2025-12-03 15:36:22] 2025-12-03 14:35:45,487 | INFO     | sum of deviations: 2939167034045.7817
[2025-12-03 15:36:22] 2025-12-03 14:35:45,488 | INFO     | mean x: 1764729369.144484
[2025-12-03 15:36:22] 2025-12-03 14:35:45,488 | INFO     | mean y: 2868860.0946619217
[2025-12-03 15:36:22] 2025-12-03 14:35:45,488 | INFO     | intersect: -6028219568.838956
[2025-12-03 15:36:22] 2025-12-03 14:35:45,490 | INFO     | chi2: 11.331798812547929
[2025-12-03 15:36:22] 2025-12-03 14:35:45,490 | INFO     | current chi2=11.331798812547929 (change=23.46413724295303 %)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,490 | INFO     | right removable region: 1404
[2025-12-03 15:36:22] 2025-12-03 14:35:45,492 | INFO     | sum of square deviations: 860015324123.6687
[2025-12-03 15:36:22] 2025-12-03 14:35:45,553 | INFO     | sum of deviations: 1978941234161.5576
[2025-12-03 15:36:22] 2025-12-03 14:35:45,553 | INFO     | mean x: 1764729674.144484
[2025-12-03 15:36:22] 2025-12-03 14:35:45,553 | INFO     | mean y: 2868530.568683274
[2025-12-03 15:36:22] 2025-12-03 14:35:45,553 | INFO     | intersect: -4057868785.7943244
[2025-12-03 15:36:22] 2025-12-03 14:35:45,555 | INFO     | chi2: 11.865866216852188
[2025-12-03 15:36:22] 2025-12-03 14:35:45,555 | INFO     | current chi2=11.865866216852188 (change=19.857003880015004 %)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,555 | INFO     | left removable region: 10
[2025-12-03 15:36:22] 2025-12-03 14:35:45,557 | INFO     | sum of square deviations: 839973967759.4637
[2025-12-03 15:36:22] 2025-12-03 14:35:45,570 | INFO     | time since job start (86422s) is within the limit (172800.0s)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,570 | INFO     | 86431s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-03 15:36:22] 2025-12-03 14:35:45,620 | INFO     | sum of deviations: 2480620761162.483
[2025-12-03 15:36:22] 2025-12-03 14:35:45,620 | INFO     | mean x: 1764729643.649211
[2025-12-03 15:36:22] 2025-12-03 14:35:45,620 | INFO     | mean y: 2880202.1707317075
[2025-12-03 15:36:22] 2025-12-03 14:35:45,621 | INFO     | intersect: -5208739633.5629
[2025-12-03 15:36:22] 2025-12-03 14:35:45,622 | INFO     | chi2: 7.450149305865524
[2025-12-03 15:36:22] 2025-12-03 14:35:45,623 | INFO     | current memory leak: 2.95 B/s (using 1394 data points, chi2=7.45)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | could have reported an average CPU frequency of 1999 MHz (48 samples)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | ..............................
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | . Timing measurements:
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | . get job = 0 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | . initial setup = 9 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,624 | INFO     | . payload setup = 107 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,625 | INFO     | . stage-in = 0 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,625 | INFO     | . payload execution = 86106 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,625 | INFO     | . stage-out = 3 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,625 | INFO     | . log creation = 1 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,625 | INFO     | ..............................
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | 
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | job summary report
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | --------------------------------------------------
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | PanDA job id: 6893860258
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | task id: 47523449
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | errors: (none)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | pilot state: finished 
[2025-12-03 15:36:22] 2025-12-03 14:35:45,885 | INFO     | transexitcode: 0
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | exeerrorcode: 0
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | exeerrordiag: 
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | exitcode: 0
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | exitmsg: OK
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | cpuconsumptiontime: 323145 s
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | nevents: 1000
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | neventsw: 0
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | pid: 30903
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | pgrp: 30903
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | corecount: 8
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | event service: False
[2025-12-03 15:36:22] 2025-12-03 14:35:45,886 | INFO     | sizes: {0: 2284089, 1: 2284344, 2: 2284344, 12: 2284372, 23: 2284400, 34: 2284428, 44: 2284584, 55: 2284612, 66: 2284640, 77: 2284668, 87: 2284724, 95: 2285294, 98
[2025-12-03 15:36:22] 2025-12-03 14:35:45,887 | INFO     | --------------------------------------------------
[2025-12-03 15:36:22] 2025-12-03 14:35:45,887 | INFO     | 
[2025-12-03 15:36:22] 2025-12-03 14:35:45,887 | INFO     | executing command: ls -lF /var/lib/boinc/slots/15
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,927 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,928 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 15:36:22] 2025-12-03 14:35:45,929 | INFO     | job 6893860258 has completed (purged errors)
[2025-12-03 15:36:22] 2025-12-03 14:35:45,929 | INFO     | overall cleanup function is called
[2025-12-03 15:36:22] 2025-12-03 14:35:46,945 | INFO     | --- collectZombieJob: --- 10, [30903]
[2025-12-03 15:36:22] 2025-12-03 14:35:46,945 | INFO     | zombie collector waiting for pid 30903
[2025-12-03 15:36:22] 2025-12-03 14:35:46,945 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 15:36:22] 2025-12-03 14:35:46,945 | INFO     | collected zombie processes
[2025-12-03 15:36:22] 2025-12-03 14:35:46,945 | INFO     | will attempt to kill all subprocesses of pid=30903
[2025-12-03 15:36:22] 2025-12-03 14:35:47,050 | INFO     | process IDs to be killed: [30903] (in reverse order)
[2025-12-03 15:36:22] 2025-12-03 14:35:47,248 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 15:36:22] 2025-12-03 14:35:47,249 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 15:36:22] 2025-12-03 14:35:47,252 | INFO     | did not find any defunct processes belonging to 30903
[2025-12-03 15:36:22] 2025-12-03 14:35:47,254 | INFO     | did not find any defunct processes belonging to 30903
[2025-12-03 15:36:22] 2025-12-03 14:35:47,267 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 15:36:22] 2025-12-03 14:35:47,267 | INFO     | ready for new job
[2025-12-03 15:36:22] 2025-12-03 14:35:47,267 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 15:36:22] 2025-12-03 14:35:47,272 | INFO     | ***************************************
[2025-12-03 15:36:22] 2025-12-03 14:35:47,272 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 15:36:22] 2025-12-03 14:35:47,272 | INFO     | ***************************************
[2025-12-03 15:36:22] 2025-12-03 14:35:47,272 | INFO     | 
[2025-12-03 15:36:22] 2025-12-03 14:35:47,273 | INFO     | pilot is running in a VM
[2025-12-03 15:36:22] 2025-12-03 14:35:47,273 | INFO     | architecture information:
[2025-12-03 15:36:22] 2025-12-03 14:35:47,275 | INFO     | executing command: cat /etc/os-release
[2025-12-03 15:36:22] 2025-12-03 14:35:47,342 | INFO     | cat /etc/os-release:
[2025-12-03 15:36:22] NAME="CentOS Linux"
[2025-12-03 15:36:22] VERSION="7 (Core)"
[2025-12-03 15:36:22] ID="centos"
[2025-12-03 15:36:22] ID_LIKE="rhel fedora"
[2025-12-03 15:36:22] VERSION_ID="7"
[2025-12-03 15:36:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 15:36:22] ANSI_COLOR="0;31"
[2025-12-03 15:36:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 15:36:22] HOME_URL="https://www.centos.org/"
[2025-12-03 15:36:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 15:36:22] 
[2025-12-03 15:36:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 15:36:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 15:36:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 15:36:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 15:36:22] 
[2025-12-03 15:36:22] 2025-12-03 14:35:47,342 | INFO     | ***************************************
[2025-12-03 15:36:22] 2025-12-03 14:35:47,845 | INFO     | executing command: df -mP /var/lib/boinc/slots/15
[2025-12-03 15:36:22] 2025-12-03 14:35:47,921 | INFO     | sufficient remaining disk space (494098448384 B)
[2025-12-03 15:36:22] 2025-12-03 14:35:47,922 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 15:36:22] 2025-12-03 14:35:47,922 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 15:36:22] 2025-12-03 14:35:47,922 | INFO     | update_server=False
[2025-12-03 15:36:22] 2025-12-03 14:35:47,922 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 15:36:22] 2025-12-03 14:35:47,923 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:36:22] 2025-12-03 14:35:47,923 | INFO     | aborting loop
[2025-12-03 15:36:22] 2025-12-03 14:35:47,925 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 15:36:22] 2025-12-03 14:35:47,925 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 15:36:22] 2025-12-03 14:35:47,987 | INFO     | all job control threads have been joined
[2025-12-03 15:36:22] 2025-12-03 14:35:48,162 | INFO     | all data control threads have been joined
[2025-12-03 15:36:22] 2025-12-03 14:35:48,535 | INFO     | all payload control threads have been joined
[2025-12-03 15:36:22] 2025-12-03 14:35:48,927 | INFO     | [job] retrieve thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:48,928 | INFO     | [job] job monitor thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:48,993 | INFO     | [job] control thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,123 | INFO     | [data] copytool_in thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,149 | INFO     | [payload] failed_post thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,168 | INFO     | [data] control thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,224 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,249 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,310 | INFO     | [payload] validate_post thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,541 | INFO     | [payload] control thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,931 | INFO     | [data] copytool_out thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:49,984 | INFO     | [job] validate thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:50,186 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:50,754 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:36:22] 2025-12-03 14:35:51,759 | INFO     | [job] queue monitor thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:51,934 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:35:53,691 | INFO     | [monitor] cgroup control has ended
[2025-12-03 15:36:22] 2025-12-03 14:35:58,823 | INFO     | job.realtimelogging is not enabled
[2025-12-03 15:36:22] 2025-12-03 14:35:59,829 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 15:36:22] 2025-12-03 14:36:01,882 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140591407609664)>', '<ExcThread(monitor, started 140590939346688)>']
[2025-12-03 15:36:22] 2025-12-03 14:36:06,908 | INFO     | all workflow threads have been joined
[2025-12-03 15:36:22] 2025-12-03 14:36:06,908 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 15:36:22] 2025-12-03 14:36:06,908 | INFO     | traces error code: 0
[2025-12-03 15:36:22] 2025-12-03 14:36:06,908 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 15:36:22] 2025-12-03 14:36:18,796 | INFO     | PID=24344 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 15:36:22] 2025-12-03 14:36:18,796 | INFO     | .. there are 9 such processes running
[2025-12-03 15:36:22] 2025-12-03 14:36:18,797 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 15:36:22] 2025-12-03 14:36:18,797 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 15:36:22] 2025-12-03 14:36:18,797 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 15:36:22] 2025-12-03 14:36:18,797 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 15:36:22] 2025-12-03 14:36:18,797 | INFO     | [monitor] control thread has ended
[2025-12-03 15:36:22] 2025-12-03 14:36:18,968 [wrapper] ==== pilot stdout END ====
[2025-12-03 15:36:22] 2025-12-03 14:36:19,087 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 15:36:22] 2025-12-03 14:36:19,217 [wrapper] pilotpid: 24344
[2025-12-03 15:36:22] 2025-12-03 14:36:19,335 [wrapper] Pilot exit status: 0
[2025-12-03 15:36:22] 2025-12-03 14:36:19,653 [wrapper] pandaids: 6893860258
[2025-12-03 15:36:22] 2025-12-03 14:36:20,441 [wrapper] cleanup supervisor_pilot 21180 24345
[2025-12-03 15:36:22] 2025-12-03 14:36:20,543 [wrapper] Test setup, not cleaning
[2025-12-03 15:36:22] 2025-12-03 14:36:20,602 [wrapper] apfmon messages muted
[2025-12-03 15:36:22] 2025-12-03 14:36:20,670 [wrapper] ==== wrapper stdout END ====
[2025-12-03 15:36:22] 2025-12-03 14:36:20,799 [wrapper] ==== wrapper stderr END ====
[2025-12-03 15:36:22]  *** Error codes and diagnostics ***
[2025-12-03 15:36:22]     "exeErrorCode": 0,
[2025-12-03 15:36:22]     "exeErrorDiag": "",
[2025-12-03 15:36:22]     "pilotErrorCode": 0,
[2025-12-03 15:36:22]     "pilotErrorDiag": "",
[2025-12-03 15:36:22]  *** Listing of results directory ***
[2025-12-03 15:36:22] total 1345076
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc    576529 Nov 20 14:12 pilot3.tar.gz
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc      5112 Nov 20 14:43 queuedata.json
[2025-12-03 15:36:22] -rwx------. 1 boinc boinc     36292 Nov 20 14:44 runpilot2-wrapper.sh
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc       100 Dec  2 15:31 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 15:36:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 15:31 run_atlas
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc       105 Dec  2 15:31 job.xml
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc      6394 Dec  2 15:31 init_data.xml
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc 412129995 Dec  2 15:31 EVNT.47493127._000553.pool.root.1
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc     15847 Dec  2 15:31 start_atlas.sh
[2025-12-03 15:36:22] drwxrwx--x. 2 boinc boinc        68 Dec  2 15:31 shared
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc    590098 Dec  2 15:31 input.tar.gz
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc         0 Dec  2 15:31 boinc_lockfile
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc      2786 Dec  2 15:32 pandaJob.out
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc    986791 Dec  2 15:35 agis_schedconf.cvmfs.json
[2025-12-03 15:36:22] drwx------. 5 boinc boinc      4096 Dec  2 15:35 pilot3
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc       533 Dec  3 15:13 boinc_task_state.xml
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc 933402038 Dec  3 15:34 HITS.47523449._005529.pool.root.1
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc      1034 Dec  3 15:35 memory_monitor_summary.json
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc   1516240 Dec  3 15:35 agis_ddmendpoints.agis.ALL.json
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc   2472530 Dec  3 15:35 log.47523449._005529.job.log.tgz.1
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc      8622 Dec  3 15:35 heartbeat.json
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc      8192 Dec  3 15:35 boinc_mmap_file
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc        29 Dec  3 15:35 wrapper_checkpoint.txt
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc       820 Dec  3 15:36 pilotlog.txt
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc        95 Dec  3 15:36 pilot_heartbeat.json
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc  11494762 Dec  3 15:36 log.47523449._005529.job.log.1
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc       353 Dec  3 15:36 output.list
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc       620 Dec  3 15:36 runtime_log
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc  13987840 Dec  3 15:36 result.tar.gz
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc      8833 Dec  3 15:36 runtime_log.err
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc       662 Dec  3 15:36 HlULDmM8Jg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmfjGKDmBwNLKn.diag
[2025-12-03 15:36:22] -rw-r--r--. 1 boinc boinc     21414 Dec  3 15:36 stderr.txt
[2025-12-03 15:36:22] HITS file was successfully produced:
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc 933402038 Dec  3 15:34 shared/HITS.pool.root.1
[2025-12-03 15:36:22]  *** Contents of shared directory: ***
[2025-12-03 15:36:22] total 1328256
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc 412129995 Dec  2 15:31 ATLAS.root_0
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc     15847 Dec  2 15:31 start_atlas.sh
[2025-12-03 15:36:22] -rw-r--r--. 2 boinc boinc    590098 Dec  2 15:31 input.tar.gz
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc 933402038 Dec  3 15:34 HITS.pool.root.1
[2025-12-03 15:36:22] -rw-------. 1 boinc boinc  13987840 Dec  3 15:36 result.tar.gz
15:36:24 (20528): run_atlas exited; CPU time 323743.403857
15:36:24 (20528): called boinc_finish(0)

</stderr_txt>
]]>

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