Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:16:40 (1958667): wrapper (7.7.26015): starting
08:16:40 (1958667): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 08:16:40] Arguments: --nthreads 4
[2025-12-03 08:16:40] Threads: 4
[2025-12-03 08:16:40] Checking for CVMFS
[2025-12-03 08:16:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 08:16:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 08:16:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 08:16:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 08:16:40] 2.9.2.0 3127036 21106 96356 153585 0 67 36299801 36864000 0 130560 0 8438086 99.960 931289 1425 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 08:16:40] CVMFS is ok
[2025-12-03 08:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 08:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 08:16:40] Further information can be found at the LHC@home message board.
[2025-12-03 08:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 08:16:40] Checking for apptainer binary...
[2025-12-03 08:16:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 08:16:40] Running /usr/bin/apptainer --version
[2025-12-03 08:16:40] apptainer version 1.4.1-1.1
[2025-12-03 08:16:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 08:16:40] thA334
[2025-12-03 08:16:40] apptainer works
[2025-12-03 08:16:40] Set ATHENA_PROC_NUMBER=4
[2025-12-03 08:16:40] Set ATHENA_CORE_NUMBER=4
[2025-12-03 08:16:40] Starting ATLAS job with PandaID=6895232067
[2025-12-03 08:16:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 14:07:21]  *** The last 200 lines of the pilot log: ***
[2025-12-03 14:07:21] 2025-12-03 13:06:31,979 | INFO     | cat /etc/os-release:
[2025-12-03 14:07:21] NAME="CentOS Linux"
[2025-12-03 14:07:21] VERSION="7 (Core)"
[2025-12-03 14:07:21] ID="centos"
[2025-12-03 14:07:21] ID_LIKE="rhel fedora"
[2025-12-03 14:07:21] VERSION_ID="7"
[2025-12-03 14:07:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 14:07:21] ANSI_COLOR="0;31"
[2025-12-03 14:07:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 14:07:21] HOME_URL="https://www.centos.org/"
[2025-12-03 14:07:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 14:07:21] 
[2025-12-03 14:07:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 14:07:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 14:07:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 14:07:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 14:07:21] 
[2025-12-03 14:07:21] 2025-12-03 13:06:31,979 | INFO     | ***************************************
[2025-12-03 14:07:21] 2025-12-03 13:06:32,482 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 14:07:21] 2025-12-03 13:06:32,499 | INFO     | sufficient remaining disk space (220366635008 B)
[2025-12-03 14:07:21] 2025-12-03 13:06:32,499 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 14:07:21] 2025-12-03 13:06:32,499 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 14:07:21] 2025-12-03 13:06:32,499 | INFO     | update_server=False
[2025-12-03 14:07:21] 2025-12-03 13:06:32,499 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 14:07:21] 2025-12-03 13:06:32,500 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 14:07:21] 2025-12-03 13:06:32,500 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 14:07:21] 2025-12-03 13:06:32,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 14:07:21] 2025-12-03 13:06:32,500 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 14:07:21] 2025-12-03 13:06:32,500 | INFO     | aborting loop
[2025-12-03 14:07:21] 2025-12-03 13:06:33,120 | INFO     | all data control threads have been joined
[2025-12-03 14:07:21] 2025-12-03 13:06:33,193 | INFO     | all job control threads have been joined
[2025-12-03 14:07:21] 2025-12-03 13:06:33,443 | INFO     | all payload control threads have been joined
[2025-12-03 14:07:21] 2025-12-03 13:06:33,505 | INFO     | [job] retrieve thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:33,505 | INFO     | [job] queue monitor thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:33,506 | INFO     | [job] job monitor thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,125 | INFO     | [data] control thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,199 | INFO     | [job] control thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,337 | INFO     | [job] validate thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,437 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,449 | INFO     | [payload] control thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,477 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,506 | INFO     | [data] copytool_out thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,527 | INFO     | [data] copytool_in thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,557 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:34,822 | INFO     | [payload] failed_post thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:35,081 | INFO     | [payload] validate_post thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:36,507 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:06:42,595 | INFO     | job.realtimelogging is not enabled
[2025-12-03 14:07:21] 2025-12-03 13:06:43,601 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 14:07:21] 2025-12-03 13:07:02,561 | INFO     | PID=1962460 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 14:07:21] 2025-12-03 13:07:02,562 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 14:07:21] 2025-12-03 13:07:02,562 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 14:07:21] 2025-12-03 13:07:02,562 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 14:07:21] 2025-12-03 13:07:14,029 | INFO     | [monitor] cgroup control has ended
[2025-12-03 14:07:21] 2025-12-03 13:07:15,917 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140324040939328)>', '<ExcThread(monitor, started 140322881398528)>']
[2025-12-03 14:07:21] 2025-12-03 13:07:16,631 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 14:07:21] 2025-12-03 13:07:16,632 | INFO     | [monitor] control thread has ended
[2025-12-03 14:07:21] 2025-12-03 13:07:20,943 | INFO     | all workflow threads have been joined
[2025-12-03 14:07:21] 2025-12-03 13:07:20,944 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 14:07:21] 2025-12-03 13:07:20,944 | INFO     | traces error code: 0
[2025-12-03 14:07:21] 2025-12-03 13:07:20,944 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 14:07:21] 2025-12-03 13:07:21,013 [wrapper] ==== pilot stdout END ====
[2025-12-03 14:07:21] 2025-12-03 13:07:21,017 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 14:07:21] 2025-12-03 13:07:21,021 [wrapper] pilotpid: 1962460
[2025-12-03 14:07:21] 2025-12-03 13:07:21,025 [wrapper] Pilot exit status: 0
[2025-12-03 14:07:21] 2025-12-03 13:07:21,036 [wrapper] pandaids: 6895232067
[2025-12-03 14:07:21] 2025-12-03 13:07:21,057 [wrapper] cleanup supervisor_pilot 2009936 1962461
[2025-12-03 14:07:21] 2025-12-03 13:07:21,061 [wrapper] Test setup, not cleaning
[2025-12-03 14:07:21] 2025-12-03 13:07:21,065 [wrapper] apfmon messages muted
[2025-12-03 14:07:21] 2025-12-03 13:07:21,068 [wrapper] ==== wrapper stdout END ====
[2025-12-03 14:07:21] 2025-12-03 13:07:21,071 [wrapper] ==== wrapper stderr END ====
[2025-12-03 14:07:21]  *** Error codes and diagnostics ***
[2025-12-03 14:07:21]     "exeErrorCode": 0,
[2025-12-03 14:07:21]     "exeErrorDiag": "",
[2025-12-03 14:07:21]     "pilotErrorCode": 0,
[2025-12-03 14:07:21]     "pilotErrorDiag": "",
[2025-12-03 14:07:21]  *** Listing of results directory ***
[2025-12-03 14:07:21] total 1071076
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-03 14:07:21] -rwx------ 1 boinc boinc     36292 Nov 28 11:31 runpilot2-wrapper.sh
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      5112 Nov 28 11:33 queuedata.json
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc       100 Dec  3 08:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 14:07:21] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 08:16 run_atlas
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc       105 Dec  3 08:16 job.xml
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc 376324053 Dec  3 08:16 EVNT.47528871._000133.pool.root.1
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc    590129 Dec  3 08:16 input.tar.gz
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc     15847 Dec  3 08:16 start_atlas.sh
[2025-12-03 14:07:21] drwxrwx--x 2 boinc boinc      4096 Dec  3 08:16 shared
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc         0 Dec  3 08:16 boinc_setup_complete
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      6369 Dec  3 08:16 init_data.xml
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc         0 Dec  3 08:16 boinc_lockfile
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      2882 Dec  3 08:16 pandaJob.out
[2025-12-03 14:07:21] -rw------- 1 boinc boinc    985779 Dec  3 08:16 agis_schedconf.cvmfs.json
[2025-12-03 14:07:21] drwx------ 5 boinc boinc      4096 Dec  3 08:16 pilot3
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc       532 Dec  3 14:02 boinc_task_state.xml
[2025-12-03 14:07:21] -rw------- 1 boinc boinc 708008840 Dec  3 14:06 HITS.47538113._001328.pool.root.1
[2025-12-03 14:07:21] -rw------- 1 boinc boinc      1027 Dec  3 14:06 memory_monitor_summary.json
[2025-12-03 14:07:21] -rw------- 1 boinc boinc   1516240 Dec  3 14:06 agis_ddmendpoints.agis.ALL.json
[2025-12-03 14:07:21] -rw------- 1 boinc boinc   1291139 Dec  3 14:06 log.47538113._001328.job.log.tgz.1
[2025-12-03 14:07:21] -rw------- 1 boinc boinc     27942 Dec  3 14:06 heartbeat.json
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      8192 Dec  3 14:06 boinc_mmap_file
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc        28 Dec  3 14:06 wrapper_checkpoint.txt
[2025-12-03 14:07:21] -rw------- 1 boinc boinc        95 Dec  3 14:07 pilot_heartbeat.json
[2025-12-03 14:07:21] -rw------- 1 boinc boinc      4824 Dec  3 14:07 pilotlog.txt
[2025-12-03 14:07:21] -rw------- 1 boinc boinc   2967312 Dec  3 14:07 log.47538113._001328.job.log.1
[2025-12-03 14:07:21] -rw------- 1 boinc boinc       353 Dec  3 14:07 output.list
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc       620 Dec  3 14:07 runtime_log
[2025-12-03 14:07:21] -rw------- 1 boinc boinc   4300800 Dec  3 14:07 result.tar.gz
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      8898 Dec  3 14:07 runtime_log.err
[2025-12-03 14:07:21] -rw------- 1 boinc boinc       665 Dec  3 14:07 qLXLDmKwAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmHdOKDmQ86Exn.diag
[2025-12-03 14:07:21] -rw-r--r-- 1 boinc boinc      8882 Dec  3 14:07 stderr.txt
[2025-12-03 14:07:21] HITS file was successfully produced:
[2025-12-03 14:07:21] -rw------- 1 boinc boinc 708008840 Dec  3 14:06 shared/HITS.pool.root.1
[2025-12-03 14:07:21]  *** Contents of shared directory: ***
[2025-12-03 14:07:21] total 1063720
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc 376324053 Dec  3 08:16 ATLAS.root_0
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc    590129 Dec  3 08:16 input.tar.gz
[2025-12-03 14:07:21] -rw-r--r-- 2 boinc boinc     15847 Dec  3 08:16 start_atlas.sh
[2025-12-03 14:07:21] -rw------- 1 boinc boinc 708008840 Dec  3 14:06 HITS.pool.root.1
[2025-12-03 14:07:21] -rw------- 1 boinc boinc   4300800 Dec  3 14:07 result.tar.gz
14:07:22 (1958667): run_atlas exited; CPU time 81720.683782
14:07:22 (1958667): called boinc_finish(0)

</stderr_txt>
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