Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
03:10:40 (3964655): wrapper (7.7.26015): starting
03:10:40 (3964655): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 03:10:40] Arguments: --nthreads 4
[2025-12-03 03:10:40] Threads: 4
[2025-12-03 03:10:40] Checking for CVMFS
[2025-12-03 03:10:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 03:10:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 03:10:40] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 03:10:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 03:10:40] 2.9.2.0 844198 20789 110288 153576 2 57 36288879 36864001 0 130560 1 8214066 99.957 910627 981 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 03:10:40] CVMFS is ok
[2025-12-03 03:10:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 03:10:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 03:10:40] Further information can be found at the LHC@home message board.
[2025-12-03 03:10:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 03:10:40] Checking for apptainer binary...
[2025-12-03 03:10:40] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 03:10:40] Running /usr/bin/apptainer --version
[2025-12-03 03:10:40] apptainer version 1.4.1-1.1
[2025-12-03 03:10:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 03:10:40] thA309
[2025-12-03 03:10:40] apptainer works
[2025-12-03 03:10:40] Set ATHENA_PROC_NUMBER=4
[2025-12-03 03:10:40] Set ATHENA_CORE_NUMBER=4
[2025-12-03 03:10:40] Starting ATLAS job with PandaID=6897783585
[2025-12-03 03:10:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 09:09:22]  *** The last 200 lines of the pilot log: ***
[2025-12-03 09:09:22] ID_LIKE="rhel fedora"
[2025-12-03 09:09:22] VERSION_ID="7"
[2025-12-03 09:09:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 09:09:22] ANSI_COLOR="0;31"
[2025-12-03 09:09:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 09:09:22] HOME_URL="https://www.centos.org/"
[2025-12-03 09:09:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 09:09:22] 
[2025-12-03 09:09:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 09:09:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 09:09:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 09:09:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 09:09:22] 
[2025-12-03 09:09:22] 2025-12-03 08:08:34,272 | INFO     | ***************************************
[2025-12-03 09:09:22] 2025-12-03 08:08:34,775 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | INFO     | sufficient remaining disk space (220767191040 B)
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | INFO     | update_server=False
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:09:22] 2025-12-03 08:08:34,795 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 09:09:22] 2025-12-03 08:08:35,157 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 09:09:22] 2025-12-03 08:08:35,157 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 09:09:22] 2025-12-03 08:08:35,158 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 09:09:22] 2025-12-03 08:08:35,158 | INFO     | will abort loop
[2025-12-03 09:09:22] 2025-12-03 08:08:35,345 | INFO     | all job control threads have been joined
[2025-12-03 09:09:22] 2025-12-03 08:08:35,505 | INFO     | all data control threads have been joined
[2025-12-03 09:09:22] 2025-12-03 08:08:35,801 | INFO     | [job] retrieve thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:35,801 | INFO     | [job] queue monitor thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:35,904 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 09:09:22] 2025-12-03 08:08:36,158 | INFO     | all payload control threads have been joined
[2025-12-03 09:09:22] 2025-12-03 08:08:36,163 | INFO     | [job] job monitor thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,164 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,166 | INFO     | [job] validate thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,304 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,351 | INFO     | [job] control thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,371 | INFO     | [payload] validate_post thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:36,511 | INFO     | [data] control thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:37,003 | INFO     | [data] copytool_in thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:37,140 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:37,164 | INFO     | [payload] control thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:37,174 | INFO     | [payload] failed_post thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:37,911 | INFO     | [data] copytool_out thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:38,803 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:08:45,203 | INFO     | job.realtimelogging is not enabled
[2025-12-03 09:09:22] 2025-12-03 08:08:46,208 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 09:09:22] 2025-12-03 08:09:05,876 | INFO     | PID=3968469 has CPU usage=0.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 09:09:22] 2025-12-03 08:09:05,876 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 09:09:22] 2025-12-03 08:09:05,876 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 09:09:22] 2025-12-03 08:09:05,876 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 09:09:22] 2025-12-03 08:09:15,480 | INFO     | [monitor] cgroup control has ended
[2025-12-03 09:09:22] 2025-12-03 08:09:17,455 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140425647134528)>', '<ExcThread(monitor, started 140425004304128)>']
[2025-12-03 09:09:22] 2025-12-03 08:09:17,941 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 09:09:22] 2025-12-03 08:09:17,941 | INFO     | [monitor] control thread has ended
[2025-12-03 09:09:22] 2025-12-03 08:09:22,481 | INFO     | all workflow threads have been joined
[2025-12-03 09:09:22] 2025-12-03 08:09:22,481 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 09:09:22] 2025-12-03 08:09:22,482 | INFO     | traces error code: 0
[2025-12-03 09:09:22] 2025-12-03 08:09:22,482 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 09:09:22] 2025-12-03 08:09:22,567 [wrapper] ==== pilot stdout END ====
[2025-12-03 09:09:22] 2025-12-03 08:09:22,571 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 09:09:22] 2025-12-03 08:09:22,575 [wrapper] pilotpid: 3968469
[2025-12-03 09:09:22] 2025-12-03 08:09:22,579 [wrapper] Pilot exit status: 0
[2025-12-03 09:09:22] 2025-12-03 08:09:22,591 [wrapper] pandaids: 6897783585
[2025-12-03 09:09:22] 2025-12-03 08:09:22,616 [wrapper] cleanup supervisor_pilot 4018714 3968470
[2025-12-03 09:09:22] 2025-12-03 08:09:22,620 [wrapper] Test setup, not cleaning
[2025-12-03 09:09:22] 2025-12-03 08:09:22,625 [wrapper] apfmon messages muted
[2025-12-03 09:09:22] 2025-12-03 08:09:22,628 [wrapper] ==== wrapper stdout END ====
[2025-12-03 09:09:22] 2025-12-03 08:09:22,632 [wrapper] ==== wrapper stderr END ====
[2025-12-03 09:09:22]  *** Error codes and diagnostics ***
[2025-12-03 09:09:22]     "exeErrorCode": 0,
[2025-12-03 09:09:22]     "exeErrorDiag": "",
[2025-12-03 09:09:22]     "pilotErrorCode": 0,
[2025-12-03 09:09:22]     "pilotErrorDiag": "",
[2025-12-03 09:09:22]  *** Listing of results directory ***
[2025-12-03 09:09:22] total 1061640
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-03 09:09:22] -rwx------ 1 boinc boinc     36292 Nov 28 11:32 runpilot2-wrapper.sh
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      5112 Nov 28 11:33 queuedata.json
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc       100 Dec  3 03:10 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 09:09:22] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 03:10 run_atlas
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc       105 Dec  3 03:10 job.xml
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc 375607851 Dec  3 03:10 EVNT.47530775._000020.pool.root.1
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc    590118 Dec  3 03:10 input.tar.gz
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:10 start_atlas.sh
[2025-12-03 09:09:22] drwxrwx--x 2 boinc boinc      4096 Dec  3 03:10 shared
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc         0 Dec  3 03:10 boinc_setup_complete
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      6378 Dec  3 03:10 init_data.xml
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc         0 Dec  3 03:10 boinc_lockfile
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      2878 Dec  3 03:10 pandaJob.out
[2025-12-03 09:09:22] -rw------- 1 boinc boinc    989300 Dec  3 03:10 agis_schedconf.cvmfs.json
[2025-12-03 09:09:22] drwx------ 5 boinc boinc      4096 Dec  3 03:10 pilot3
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc       531 Dec  3 09:04 boinc_task_state.xml
[2025-12-03 09:09:22] -rw------- 1 boinc boinc 698898174 Dec  3 09:08 HITS.47530783._000198.pool.root.1
[2025-12-03 09:09:22] -rw------- 1 boinc boinc      1027 Dec  3 09:08 memory_monitor_summary.json
[2025-12-03 09:09:22] -rw------- 1 boinc boinc   1516240 Dec  3 09:08 agis_ddmendpoints.agis.ALL.json
[2025-12-03 09:09:22] -rw------- 1 boinc boinc   1305620 Dec  3 09:08 log.47530783._000198.job.log.tgz.1
[2025-12-03 09:09:22] -rw------- 1 boinc boinc     26898 Dec  3 09:08 heartbeat.json
[2025-12-03 09:09:22] -rw------- 1 boinc boinc        95 Dec  3 09:09 pilot_heartbeat.json
[2025-12-03 09:09:22] -rw------- 1 boinc boinc      5010 Dec  3 09:09 pilotlog.txt
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      8192 Dec  3 09:09 boinc_mmap_file
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc        28 Dec  3 09:09 wrapper_checkpoint.txt
[2025-12-03 09:09:22] -rw------- 1 boinc boinc   3033311 Dec  3 09:09 log.47530783._000198.job.log.1
[2025-12-03 09:09:22] -rw------- 1 boinc boinc       353 Dec  3 09:09 output.list
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc       620 Dec  3 09:09 runtime_log
[2025-12-03 09:09:22] -rw------- 1 boinc boinc   4372480 Dec  3 09:09 result.tar.gz
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      8898 Dec  3 09:09 runtime_log.err
[2025-12-03 09:09:22] -rw------- 1 boinc boinc       665 Dec  3 09:09 lDrNDm4wAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmIPLKDm8Gieim.diag
[2025-12-03 09:09:22] -rw-r--r-- 1 boinc boinc      8914 Dec  3 09:09 stderr.txt
[2025-12-03 09:09:22] HITS file was successfully produced:
[2025-12-03 09:09:22] -rw------- 1 boinc boinc 698898174 Dec  3 09:08 shared/HITS.pool.root.1
[2025-12-03 09:09:22]  *** Contents of shared directory: ***
[2025-12-03 09:09:22] total 1054204
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc 375607851 Dec  3 03:10 ATLAS.root_0
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc    590118 Dec  3 03:10 input.tar.gz
[2025-12-03 09:09:22] -rw-r--r-- 2 boinc boinc     15847 Dec  3 03:10 start_atlas.sh
[2025-12-03 09:09:22] -rw------- 1 boinc boinc 698898174 Dec  3 09:08 HITS.pool.root.1
[2025-12-03 09:09:22] -rw------- 1 boinc boinc   4372480 Dec  3 09:09 result.tar.gz
09:09:24 (3964655): run_atlas exited; CPU time 83788.304117
09:09:24 (3964655): called boinc_finish(0)

</stderr_txt>
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