Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:50:11 (20540): wrapper (7.7.26015): starting
09:50:11 (20540): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 09:50:11] Arguments: --nthreads 12
[2025-11-30 09:50:11] Threads: 12
[2025-11-30 09:50:11] Checking for CVMFS
[2025-11-30 09:50:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 09:50:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 09:50:12] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 09:50:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 09:50:12] 2.11.2.0 2981 293537 88432 153483 3 56 10478916 20275201 1 130560 1 133388343 99.965 17484133 14572 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 09:50:12] CVMFS is ok
[2025-11-30 09:50:12] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 09:50:12] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 09:50:12] Further information can be found at the LHC@home message board.
[2025-11-30 09:50:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 09:50:12] Checking for apptainer binary...
[2025-11-30 09:50:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 09:50:12] Running /usr/bin/apptainer --version
[2025-11-30 09:50:12] apptainer version 1.3.2-1.el7
[2025-11-30 09:50:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 09:50:13] c-205-30.aglt2.org
[2025-11-30 09:50:13] apptainer works
[2025-11-30 09:50:13] Set ATHENA_PROC_NUMBER=12
[2025-11-30 09:50:13] Set ATHENA_CORE_NUMBER=12
[2025-11-30 09:50:13] Starting ATLAS job with PandaID=6897687807
[2025-11-30 09:50:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 16:06:10]  *** The last 200 lines of the pilot log: ***
[2025-11-30 16:06:10] 2025-11-30 21:05:29,616 | INFO     | monitor loop #1691: job 0:6897687807 is in state 'finished'
[2025-11-30 16:06:10] 2025-11-30 21:05:29,616 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,580 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 16:06:10] 2025-11-30 21:05:30,583 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1795.6666666666667
[2025-11-30 16:06:10] 2025-11-30 21:05:30,585 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897687807/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,585 | INFO     | extracted standard info from prmon json
[2025-11-30 16:06:10] 2025-11-30 21:05:30,585 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 16:06:10] 2025-11-30 21:05:30,585 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 16:06:10] 2025-11-30 21:05:30,591 | INFO     | fitting pss+swap vs Time
[2025-11-30 16:06:10] 2025-11-30 21:05:30,592 | INFO     | sum of square deviations: 15579511537.224937
[2025-11-30 16:06:10] 2025-11-30 21:05:30,595 | INFO     | sum of deviations: 313325875948.66364
[2025-11-30 16:06:10] 2025-11-30 21:05:30,595 | INFO     | mean x: 1764525489.086721
[2025-11-30 16:06:10] 2025-11-30 21:05:30,595 | INFO     | mean y: 3990915.135501355
[2025-11-30 16:06:10] 2025-11-30 21:05:30,595 | INFO     | intersect: -35483096929.74567
[2025-11-30 16:06:10] 2025-11-30 21:05:30,596 | INFO     | chi2: 6.546588967509403
[2025-11-30 16:06:10] 2025-11-30 21:05:30,596 | INFO     | sum of square deviations: 14954746792.186718
[2025-11-30 16:06:10] 2025-11-30 21:05:30,599 | INFO     | sum of deviations: 498997887657.73035
[2025-11-30 16:06:10] 2025-11-30 21:05:30,599 | INFO     | mean x: 1764525336.587912
[2025-11-30 16:06:10] 2025-11-30 21:05:30,600 | INFO     | mean y: 4036190.2115384615
[2025-11-30 16:06:10] 2025-11-30 21:05:30,600 | INFO     | intersect: -58873217160.272354
[2025-11-30 16:06:10] 2025-11-30 21:05:30,600 | INFO     | chi2: 2.7698408248064967
[2025-11-30 16:06:10] 2025-11-30 21:05:30,600 | INFO     | current chi2=2.7698408248064967 (change=57.69032027895498 %)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,601 | INFO     | sum of square deviations: 14346912597.147589
[2025-11-30 16:06:10] 2025-11-30 21:05:30,604 | INFO     | sum of deviations: 515715404681.1617
[2025-11-30 16:06:10] 2025-11-30 21:05:30,604 | INFO     | mean x: 1764525184.0891366
[2025-11-30 16:06:10] 2025-11-30 21:05:30,604 | INFO     | mean y: 4040323.6824512533
[2025-11-30 16:06:10] 2025-11-30 21:05:30,604 | INFO     | intersect: -63423739919.68172
[2025-11-30 16:06:10] 2025-11-30 21:05:30,604 | INFO     | chi2: 2.5689154484399643
[2025-11-30 16:06:10] 2025-11-30 21:05:30,605 | INFO     | current chi2=2.5689154484399643 (change=7.254040541501847 %)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,605 | INFO     | right removable region: 358
[2025-11-30 16:06:10] 2025-11-30 21:05:30,605 | INFO     | sum of square deviations: 14954727272.186718
[2025-11-30 16:06:10] 2025-11-30 21:05:30,608 | INFO     | sum of deviations: 165386881105.98892
[2025-11-30 16:06:10] 2025-11-30 21:05:30,608 | INFO     | mean x: 1764525641.587912
[2025-11-30 16:06:10] 2025-11-30 21:05:30,608 | INFO     | mean y: 4026915.9065934066
[2025-11-30 16:06:10] 2025-11-30 21:05:30,608 | INFO     | intersect: -19510163291.79599
[2025-11-30 16:06:10] 2025-11-30 21:05:30,609 | INFO     | chi2: 4.128278816485397
[2025-11-30 16:06:10] 2025-11-30 21:05:30,609 | INFO     | current chi2=4.128278816485397 (change=36.940002847681946 %)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,609 | INFO     | sum of square deviations: 14346873557.14759
[2025-11-30 16:06:10] 2025-11-30 21:05:30,612 | INFO     | sum of deviations: 136966141068.84122
[2025-11-30 16:06:10] 2025-11-30 21:05:30,612 | INFO     | mean x: 1764525794.0891366
[2025-11-30 16:06:10] 2025-11-30 21:05:30,613 | INFO     | mean y: 4034034.0362116992
[2025-11-30 16:06:10] 2025-11-30 21:05:30,613 | INFO     | intersect: -16841468079.726894
[2025-11-30 16:06:10] 2025-11-30 21:05:30,613 | INFO     | chi2: 4.092362904200392
[2025-11-30 16:06:10] 2025-11-30 21:05:30,613 | INFO     | current chi2=4.092362904200392 (change=0.8699972526463694 %)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,613 | INFO     | left removable region: 20
[2025-11-30 16:06:10] 2025-11-30 21:05:30,614 | INFO     | sum of square deviations: 11973607097.837389
[2025-11-30 16:06:10] 2025-11-30 21:05:30,616 | INFO     | sum of deviations: 296144733315.2604
[2025-11-30 16:06:10] 2025-11-30 21:05:30,617 | INFO     | mean x: 1764525763.5887575
[2025-11-30 16:06:10] 2025-11-30 21:05:30,617 | INFO     | mean y: 4096717.8579881657
[2025-11-30 16:06:10] 2025-11-30 21:05:30,617 | INFO     | intersect: -43638141365.95888
[2025-11-30 16:06:10] 2025-11-30 21:05:30,617 | INFO     | chi2: 0.02963847849939708
[2025-11-30 16:06:10] 2025-11-30 21:05:30,617 | INFO     | current memory leak: 24.73 B/s (using 338 data points, chi2=0.03)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | could have reported an average CPU frequency of 2391 MHz (16 samples)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | ..............................
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | . Timing measurements:
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | . get job = 0 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | . initial setup = 2 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,618 | INFO     | . payload setup = 14 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,619 | INFO     | . stage-in = 0 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,619 | INFO     | . payload execution = 22458 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,619 | INFO     | . stage-out = 3 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,619 | INFO     | . log creation = 0 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,619 | INFO     | ..............................
[2025-11-30 16:06:10] 2025-11-30 21:05:30,674 | INFO     | time since job start (22502s) is within the limit (172800.0s)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,819 | INFO     | 
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | job summary report
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | --------------------------------------------------
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | PanDA job id: 6897687807
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | task id: 47538121
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | errors: (none)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,820 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | pilot state: finished 
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | transexitcode: 0
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | exeerrorcode: 0
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | exeerrordiag: 
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | exitcode: 0
[2025-11-30 16:06:10] 2025-11-30 21:05:30,821 | INFO     | exitmsg: OK
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | cpuconsumptiontime: 256572 s
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | nevents: 1000
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | neventsw: 0
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | pid: 31362
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | pgrp: 31362
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | corecount: 12
[2025-11-30 16:06:10] 2025-11-30 21:05:30,822 | INFO     | event service: False
[2025-11-30 16:06:10] 2025-11-30 21:05:30,823 | INFO     | sizes: {0: 2284450, 5: 2284712, 11: 2284768, 22476: 2339482, 22479: 2348532, 22486: 2348722}
[2025-11-30 16:06:10] 2025-11-30 21:05:30,823 | INFO     | --------------------------------------------------
[2025-11-30 16:06:10] 2025-11-30 21:05:30,823 | INFO     | 
[2025-11-30 16:06:10] 2025-11-30 21:05:30,823 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 16:06:10] 2025-11-30 21:05:30,857 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,857 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,857 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,857 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,858 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,859 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,860 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,860 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,860 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 16:06:10] 2025-11-30 21:05:30,860 | INFO     | job 6897687807 has completed (purged errors)
[2025-11-30 16:06:10] 2025-11-30 21:05:30,860 | INFO     | overall cleanup function is called
[2025-11-30 16:06:10] 2025-11-30 21:05:31,803 | INFO     | PID=24265 has CPU usage=11.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 16:06:10] 2025-11-30 21:05:31,877 | INFO     | --- collectZombieJob: --- 10, [31362]
[2025-11-30 16:06:10] 2025-11-30 21:05:31,878 | INFO     | zombie collector waiting for pid 31362
[2025-11-30 16:06:10] 2025-11-30 21:05:31,878 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 16:06:10] 2025-11-30 21:05:31,878 | INFO     | collected zombie processes
[2025-11-30 16:06:10] 2025-11-30 21:05:31,878 | INFO     | will attempt to kill all subprocesses of pid=31362
[2025-11-30 16:06:10] 2025-11-30 21:05:31,971 | INFO     | process IDs to be killed: [31362] (in reverse order)
[2025-11-30 16:06:10] 2025-11-30 21:05:32,025 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 16:06:10] 2025-11-30 21:05:32,025 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 16:06:10] 2025-11-30 21:05:32,029 | INFO     | did not find any defunct processes belonging to 31362
[2025-11-30 16:06:10] 2025-11-30 21:05:32,032 | INFO     | did not find any defunct processes belonging to 31362
[2025-11-30 16:06:10] 2025-11-30 21:05:32,034 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 16:06:10] 2025-11-30 21:05:32,034 | INFO     | ready for new job
[2025-11-30 16:06:10] 2025-11-30 21:05:32,034 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 16:06:10] 2025-11-30 21:05:32,036 | INFO     | ***************************************
[2025-11-30 16:06:10] 2025-11-30 21:05:32,036 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 16:06:10] 2025-11-30 21:05:32,037 | INFO     | ***************************************
[2025-11-30 16:06:10] 2025-11-30 21:05:32,037 | INFO     | 
[2025-11-30 16:06:10] 2025-11-30 21:05:32,037 | INFO     | architecture information:
[2025-11-30 16:06:10] 2025-11-30 21:05:32,038 | INFO     | executing command: cat /etc/os-release
[2025-11-30 16:06:10] 2025-11-30 21:05:32,054 | INFO     | cat /etc/os-release:
[2025-11-30 16:06:10] NAME="CentOS Linux"
[2025-11-30 16:06:10] VERSION="7 (Core)"
[2025-11-30 16:06:10] ID="centos"
[2025-11-30 16:06:10] ID_LIKE="rhel fedora"
[2025-11-30 16:06:10] VERSION_ID="7"
[2025-11-30 16:06:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 16:06:10] ANSI_COLOR="0;31"
[2025-11-30 16:06:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 16:06:10] HOME_URL="https://www.centos.org/"
[2025-11-30 16:06:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 16:06:10] 
[2025-11-30 16:06:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 16:06:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 16:06:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 16:06:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 16:06:10] 
[2025-11-30 16:06:10] 2025-11-30 21:05:32,054 | INFO     | ***************************************
[2025-11-30 16:06:10] 2025-11-30 21:05:32,556 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 16:06:10] 2025-11-30 21:05:32,573 | INFO     | sufficient remaining disk space (28528607232 B)
[2025-11-30 16:06:10] 2025-11-30 21:05:32,574 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 16:06:10] 2025-11-30 21:05:32,574 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 16:06:10] 2025-11-30 21:05:32,574 | INFO     | update_server=False
[2025-11-30 16:06:10] 2025-11-30 21:05:32,574 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 16:06:10] 2025-11-30 21:05:32,575 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:06:10] 2025-11-30 21:05:32,575 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 16:06:10] 2025-11-30 21:05:32,576 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 16:06:10] 2025-11-30 21:05:32,576 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 16:06:10] 2025-11-30 21:05:32,576 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 16:06:10] 2025-11-30 21:05:32,576 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 16:06:10] 2025-11-30 21:05:32,770 | INFO     | all payload control threads have been joined
[2025-11-30 16:06:10] 2025-11-30 21:05:33,126 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:06:10] 2025-11-30 21:05:33,126 | INFO     | aborting loop
[2025-11-30 16:06:10] 2025-11-30 21:05:33,412 | INFO     | all data control threads have been joined
[2025-11-30 16:06:10] 2025-11-30 21:05:33,580 | INFO     | [job] retrieve thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:33,581 | INFO     | [job] queue monitor thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:33,682 | INFO     | all job control threads have been joined
[2025-11-30 16:06:10] 2025-11-30 21:05:33,726 | INFO     | [job] validate thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:33,727 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:33,775 | INFO     | [payload] control thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,135 | INFO     | [data] copytool_in thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,141 | INFO     | [job] job monitor thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,417 | INFO     | [data] control thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,439 | INFO     | [payload] validate_post thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,502 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,553 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,581 | INFO     | [data] copytool_out thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,665 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 16:06:10] 2025-11-30 21:05:34,687 | INFO     | [job] control thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:34,740 | INFO     | [payload] failed_post thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:35,060 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:05:38,671 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 16:06:10] 2025-11-30 21:06:04,541 | INFO     | [monitor] cgroup control has ended
[2025-11-30 16:06:10] 2025-11-30 21:06:04,857 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139842183067456)>', '<ExcThread(monitor, started 139841870206720)>']
[2025-11-30 16:06:10] 2025-11-30 21:06:05,744 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 16:06:10] 2025-11-30 21:06:05,745 | INFO     | [monitor] control thread has ended
[2025-11-30 16:06:10] 2025-11-30 21:06:09,859 | INFO     | all workflow threads have been joined
[2025-11-30 16:06:10] 2025-11-30 21:06:09,859 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 16:06:10] 2025-11-30 21:06:09,859 | INFO     | traces error code: 0
[2025-11-30 16:06:10] 2025-11-30 21:06:09,860 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 16:06:10] 2025-11-30 21:06:09,946 [wrapper] ==== pilot stdout END ====
[2025-11-30 16:06:10] 2025-11-30 21:06:09,949 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 16:06:10] 2025-11-30 21:06:09,953 [wrapper] pilotpid: 24265
[2025-11-30 16:06:10] 2025-11-30 21:06:09,956 [wrapper] Pilot exit status: 0
[2025-11-30 16:06:10] 2025-11-30 21:06:09,970 [wrapper] pandaids: 6897687807
[2025-11-30 16:06:10] 2025-11-30 21:06:10,010 [wrapper] cleanup supervisor_pilot 15506 24266
[2025-11-30 16:06:10] 2025-11-30 21:06:10,014 [wrapper] Test setup, not cleaning
[2025-11-30 16:06:10] 2025-11-30 21:06:10,017 [wrapper] apfmon messages muted
[2025-11-30 16:06:10] 2025-11-30 21:06:10,022 [wrapper] ==== wrapper stdout END ====
[2025-11-30 16:06:10] 2025-11-30 21:06:10,025 [wrapper] ==== wrapper stderr END ====
[2025-11-30 16:06:10]  *** Error codes and diagnostics ***
[2025-11-30 16:06:10]     "exeErrorCode": 0,
[2025-11-30 16:06:10]     "exeErrorDiag": "",
[2025-11-30 16:06:10]     "pilotErrorCode": 0,
[2025-11-30 16:06:10]     "pilotErrorDiag": "",
[2025-11-30 16:06:10]  *** Listing of results directory ***
[2025-11-30 16:06:10] total 1070096
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-11-30 16:06:10] -rwx------ 1 boincer umatlas     36292 Nov 28 05:29 runpilot2-wrapper.sh
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:33 queuedata.json
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas       100 Nov 30 09:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 16:06:10] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 09:50 run_atlas
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas       105 Nov 30 09:50 job.xml
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas 375033648 Nov 30 09:50 EVNT.47528880._000032.pool.root.1
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 09:50 start_atlas.sh
[2025-11-30 16:06:10] drwxrwx--x 2 boincer umatlas      4096 Nov 30 09:50 shared
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas    590124 Nov 30 09:50 input.tar.gz
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas         0 Nov 30 09:50 boinc_lockfile
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas      2879 Nov 30 09:50 pandaJob.out
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas        57 Nov 30 09:50 setup.sh.local
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas    991799 Nov 30 09:50 agis_schedconf.cvmfs.json
[2025-11-30 16:06:10] drwx------ 5 boincer umatlas      4096 Nov 30 09:50 pilot3
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas       532 Nov 30 15:57 boinc_task_state.xml
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas      5955 Nov 30 16:03 init_data.xml
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas        95 Nov 30 16:04 pilot_heartbeat.json
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas 705991177 Nov 30 16:04 HITS.47538121._000320.pool.root.1
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas      1061 Nov 30 16:05 memory_monitor_summary.json
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas   1516240 Nov 30 16:05 agis_ddmendpoints.agis.ALL.json
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas   2242903 Nov 30 16:05 log.47538121._000320.job.log.tgz.1
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas     27905 Nov 30 16:05 heartbeat.json
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 16:06 boinc_mmap_file
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas        29 Nov 30 16:06 wrapper_checkpoint.txt
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas      4552 Nov 30 16:06 pilotlog.txt
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas   3157729 Nov 30 16:06 log.47538121._000320.job.log.1
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas       353 Nov 30 16:06 output.list
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas       620 Nov 30 16:06 runtime_log
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas   5437440 Nov 30 16:06 result.tar.gz
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas      9345 Nov 30 16:06 runtime_log.err
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas       670 Nov 30 16:06 3ToMDmOuAj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmGLLKDmGrs1gn.diag
[2025-11-30 16:06:10] -rw-r--r-- 1 boincer umatlas     21337 Nov 30 16:06 stderr.txt
[2025-11-30 16:06:10] HITS file was successfully produced:
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas 705991177 Nov 30 16:04 shared/HITS.pool.root.1
[2025-11-30 16:06:10]  *** Contents of shared directory: ***
[2025-11-30 16:06:10] total 1061604
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas 375033648 Nov 30 09:50 ATLAS.root_0
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 09:50 start_atlas.sh
[2025-11-30 16:06:10] -rw-r--r-- 2 boincer umatlas    590124 Nov 30 09:50 input.tar.gz
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas 705991177 Nov 30 16:04 HITS.pool.root.1
[2025-11-30 16:06:10] -rw------- 1 boincer umatlas   5437440 Nov 30 16:06 result.tar.gz
16:06:11 (20540): run_atlas exited; CPU time 249491.525456
16:06:11 (20540): called boinc_finish(0)

</stderr_txt>
]]>

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