Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
09:00:33 (23879): wrapper (7.7.26015): starting
09:00:33 (23879): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 09:00:33] Arguments: --nthreads 12
[2025-11-30 09:00:33] Threads: 12
[2025-11-30 09:00:33] Checking for CVMFS
[2025-11-30 09:00:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 09:00:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 09:00:34] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 09:00:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 09:00:34] 2.11.2.0 2913 293534 96688 153482 2 82 11504658 20275200 1 130560 1 132566590 99.962 17707027 13968 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 09:00:34] CVMFS is ok
[2025-11-30 09:00:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 09:00:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 09:00:34] Further information can be found at the LHC@home message board.
[2025-11-30 09:00:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 09:00:34] Checking for apptainer binary...
[2025-11-30 09:00:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 09:00:34] Running /usr/bin/apptainer --version
[2025-11-30 09:00:34] apptainer version 1.3.2-1.el7
[2025-11-30 09:00:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 09:00:35] c-205-6.aglt2.org
[2025-11-30 09:00:35] apptainer works
[2025-11-30 09:00:35] Set ATHENA_PROC_NUMBER=12
[2025-11-30 09:00:35] Set ATHENA_CORE_NUMBER=12
[2025-11-30 09:00:35] Starting ATLAS job with PandaID=6896261825
[2025-11-30 09:00:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 15:11:39]  *** The last 200 lines of the pilot log: ***
[2025-11-30 15:11:39] 2025-11-30 20:11:07,751 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,824 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 15:11:39] 2025-11-30 20:11:07,828 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-30 15:11:39] 2025-11-30 20:11:07,829 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6896261825/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,830 | INFO     | extracted standard info from prmon json
[2025-11-30 15:11:39] 2025-11-30 20:11:07,830 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 15:11:39] 2025-11-30 20:11:07,830 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 15:11:39] 2025-11-30 20:11:07,836 | INFO     | fitting pss+swap vs Time
[2025-11-30 15:11:39] 2025-11-30 20:11:07,837 | INFO     | sum of square deviations: 14954876226.074205
[2025-11-30 15:11:39] 2025-11-30 20:11:07,839 | INFO     | sum of deviations: 302180983593.9863
[2025-11-30 15:11:39] 2025-11-30 20:11:07,840 | INFO     | mean x: 1764522357.8434067
[2025-11-30 15:11:39] 2025-11-30 20:11:07,840 | INFO     | mean y: 3978548.14010989
[2025-11-30 15:11:39] 2025-11-30 20:11:07,840 | INFO     | intersect: -35650285225.50745
[2025-11-30 15:11:39] 2025-11-30 20:11:07,840 | INFO     | chi2: 5.9564067226661255
[2025-11-30 15:11:39] 2025-11-30 20:11:07,841 | INFO     | sum of square deviations: 14347070395.47626
[2025-11-30 15:11:39] 2025-11-30 20:11:07,844 | INFO     | sum of deviations: 457510167380.3286
[2025-11-30 15:11:39] 2025-11-30 20:11:07,844 | INFO     | mean x: 1764522205.3481894
[2025-11-30 15:11:39] 2025-11-30 20:11:07,844 | INFO     | mean y: 4017467.8133704737
[2025-11-30 15:11:39] 2025-11-30 20:11:07,844 | INFO     | intersect: -56264393243.38663
[2025-11-30 15:11:39] 2025-11-30 20:11:07,844 | INFO     | chi2: 3.1208315326150293
[2025-11-30 15:11:39] 2025-11-30 20:11:07,845 | INFO     | current chi2=3.1208315326150293 (change=47.60546621607926 %)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,845 | INFO     | sum of square deviations: 13755962552.361706
[2025-11-30 15:11:39] 2025-11-30 20:11:07,848 | INFO     | sum of deviations: 510801776985.0342
[2025-11-30 15:11:39] 2025-11-30 20:11:07,848 | INFO     | mean x: 1764522052.8531075
[2025-11-30 15:11:39] 2025-11-30 20:11:07,848 | INFO     | mean y: 4031150.9237288134
[2025-11-30 15:11:39] 2025-11-30 20:11:07,848 | INFO     | intersect: -65518173979.81818
[2025-11-30 15:11:39] 2025-11-30 20:11:07,848 | INFO     | chi2: 2.5767995958229655
[2025-11-30 15:11:39] 2025-11-30 20:11:07,849 | INFO     | current chi2=2.5767995958229655 (change=17.432275055751077 %)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,849 | INFO     | right removable region: 353
[2025-11-30 15:11:39] 2025-11-30 20:11:07,849 | INFO     | sum of square deviations: 14347016105.169935
[2025-11-30 15:11:39] 2025-11-30 20:11:07,852 | INFO     | sum of deviations: 156604949575.36185
[2025-11-30 15:11:39] 2025-11-30 20:11:07,852 | INFO     | mean x: 1764522510.345404
[2025-11-30 15:11:39] 2025-11-30 20:11:07,852 | INFO     | mean y: 4014958.9164345404
[2025-11-30 15:11:39] 2025-11-30 20:11:07,852 | INFO     | intersect: -19256642221.056793
[2025-11-30 15:11:39] 2025-11-30 20:11:07,853 | INFO     | chi2: 3.516689665072129
[2025-11-30 15:11:39] 2025-11-30 20:11:07,853 | INFO     | current chi2=3.516689665072129 (change=40.95954442315121 %)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,853 | INFO     | sum of square deviations: 13755919911.82205
[2025-11-30 15:11:39] 2025-11-30 20:11:07,856 | INFO     | sum of deviations: 127743480121.14418
[2025-11-30 15:11:39] 2025-11-30 20:11:07,856 | INFO     | mean x: 1764522662.838983
[2025-11-30 15:11:39] 2025-11-30 20:11:07,857 | INFO     | mean y: 4022392.511299435
[2025-11-30 15:11:39] 2025-11-30 20:11:07,857 | INFO     | intersect: -16382105699.871851
[2025-11-30 15:11:39] 2025-11-30 20:11:07,857 | INFO     | chi2: 3.4733025970622884
[2025-11-30 15:11:39] 2025-11-30 20:11:07,857 | INFO     | current chi2=3.4733025970622884 (change=1.2337474199319376 %)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,857 | INFO     | left removable region: 20
[2025-11-30 15:11:39] 2025-11-30 20:11:07,858 | INFO     | sum of square deviations: 11450250051.591614
[2025-11-30 15:11:39] 2025-11-30 20:11:07,860 | INFO     | sum of deviations: 291998409242.09296
[2025-11-30 15:11:39] 2025-11-30 20:11:07,860 | INFO     | mean x: 1764522632.3483484
[2025-11-30 15:11:39] 2025-11-30 20:11:07,861 | INFO     | mean y: 4089051.714714715
[2025-11-30 15:11:39] 2025-11-30 20:11:07,861 | INFO     | intersect: -44993862905.30554
[2025-11-30 15:11:39] 2025-11-30 20:11:07,861 | INFO     | chi2: 0.03488378893077294
[2025-11-30 15:11:39] 2025-11-30 20:11:07,861 | INFO     | current memory leak: 25.50 B/s (using 333 data points, chi2=0.03)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | could have reported an average CPU frequency of 2314 MHz (16 samples)
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | ..............................
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . Timing measurements:
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . get job = 0 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . initial setup = 2 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . payload setup = 13 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . stage-in = 0 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . payload execution = 22170 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,862 | INFO     | . stage-out = 3 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,863 | INFO     | . log creation = 0 s
[2025-11-30 15:11:39] 2025-11-30 20:11:07,863 | INFO     | ..............................
[2025-11-30 15:11:39] 2025-11-30 20:11:08,063 | INFO     | 
[2025-11-30 15:11:39] 2025-11-30 20:11:08,064 | INFO     | job summary report
[2025-11-30 15:11:39] 2025-11-30 20:11:08,064 | INFO     | --------------------------------------------------
[2025-11-30 15:11:39] 2025-11-30 20:11:08,064 | INFO     | PanDA job id: 6896261825
[2025-11-30 15:11:39] 2025-11-30 20:11:08,064 | INFO     | task id: 47531058
[2025-11-30 15:11:39] 2025-11-30 20:11:08,064 | INFO     | errors: (none)
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | pilot state: finished 
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | transexitcode: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | exeerrorcode: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | exeerrordiag: 
[2025-11-30 15:11:39] 2025-11-30 20:11:08,065 | INFO     | exitcode: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | exitmsg: OK
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | cpuconsumptiontime: 251965 s
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | nevents: 1000
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | neventsw: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | pid: 3268
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | pgrp: 3268
[2025-11-30 15:11:39] 2025-11-30 20:11:08,066 | INFO     | corecount: 12
[2025-11-30 15:11:39] 2025-11-30 20:11:08,067 | INFO     | event service: False
[2025-11-30 15:11:39] 2025-11-30 20:11:08,067 | INFO     | sizes: {0: 2284279, 1: 2284478, 5: 2284740, 11: 2284796, 22188: 2339343, 22192: 2348337, 22195: 2348521, 22201: 2348767}
[2025-11-30 15:11:39] 2025-11-30 20:11:08,067 | INFO     | --------------------------------------------------
[2025-11-30 15:11:39] 2025-11-30 20:11:08,067 | INFO     | 
[2025-11-30 15:11:39] 2025-11-30 20:11:08,067 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 15:11:39] 2025-11-30 20:11:08,091 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,092 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,093 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,093 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,093 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,093 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,093 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,094 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 15:11:39] 2025-11-30 20:11:08,095 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,095 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 15:11:39] 2025-11-30 20:11:08,095 | INFO     | job 6896261825 has completed (purged errors)
[2025-11-30 15:11:39] 2025-11-30 20:11:08,095 | INFO     | overall cleanup function is called
[2025-11-30 15:11:39] 2025-11-30 20:11:09,113 | INFO     | --- collectZombieJob: --- 10, [3268]
[2025-11-30 15:11:39] 2025-11-30 20:11:09,113 | INFO     | zombie collector waiting for pid 3268
[2025-11-30 15:11:39] 2025-11-30 20:11:09,117 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 15:11:39] 2025-11-30 20:11:09,118 | INFO     | collected zombie processes
[2025-11-30 15:11:39] 2025-11-30 20:11:09,118 | INFO     | will attempt to kill all subprocesses of pid=3268
[2025-11-30 15:11:39] 2025-11-30 20:11:09,211 | INFO     | process IDs to be killed: [3268] (in reverse order)
[2025-11-30 15:11:39] 2025-11-30 20:11:09,262 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 15:11:39] 2025-11-30 20:11:09,262 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 15:11:39] 2025-11-30 20:11:09,266 | INFO     | did not find any defunct processes belonging to 3268
[2025-11-30 15:11:39] 2025-11-30 20:11:09,269 | INFO     | did not find any defunct processes belonging to 3268
[2025-11-30 15:11:39] 2025-11-30 20:11:09,271 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 15:11:39] 2025-11-30 20:11:09,272 | INFO     | ready for new job
[2025-11-30 15:11:39] 2025-11-30 20:11:09,272 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 15:11:39] 2025-11-30 20:11:09,274 | INFO     | ***************************************
[2025-11-30 15:11:39] 2025-11-30 20:11:09,274 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 15:11:39] 2025-11-30 20:11:09,274 | INFO     | ***************************************
[2025-11-30 15:11:39] 2025-11-30 20:11:09,274 | INFO     | 
[2025-11-30 15:11:39] 2025-11-30 20:11:09,275 | INFO     | architecture information:
[2025-11-30 15:11:39] 2025-11-30 20:11:09,275 | INFO     | executing command: cat /etc/os-release
[2025-11-30 15:11:39] 2025-11-30 20:11:09,290 | INFO     | cat /etc/os-release:
[2025-11-30 15:11:39] NAME="CentOS Linux"
[2025-11-30 15:11:39] VERSION="7 (Core)"
[2025-11-30 15:11:39] ID="centos"
[2025-11-30 15:11:39] ID_LIKE="rhel fedora"
[2025-11-30 15:11:39] VERSION_ID="7"
[2025-11-30 15:11:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 15:11:39] ANSI_COLOR="0;31"
[2025-11-30 15:11:39] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 15:11:39] HOME_URL="https://www.centos.org/"
[2025-11-30 15:11:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 15:11:39] 
[2025-11-30 15:11:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 15:11:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 15:11:39] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 15:11:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 15:11:39] 
[2025-11-30 15:11:39] 2025-11-30 20:11:09,290 | INFO     | ***************************************
[2025-11-30 15:11:39] 2025-11-30 20:11:09,793 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 15:11:39] 2025-11-30 20:11:09,810 | INFO     | sufficient remaining disk space (28535947264 B)
[2025-11-30 15:11:39] 2025-11-30 20:11:09,811 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 15:11:39] 2025-11-30 20:11:09,811 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 15:11:39] 2025-11-30 20:11:09,811 | INFO     | update_server=False
[2025-11-30 15:11:39] 2025-11-30 20:11:09,811 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 15:11:39] 2025-11-30 20:11:09,812 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:11:39] 2025-11-30 20:11:09,812 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 15:11:39] 2025-11-30 20:11:10,252 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 15:11:39] 2025-11-30 20:11:10,253 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 15:11:39] 2025-11-30 20:11:10,253 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 15:11:39] 2025-11-30 20:11:10,253 | INFO     | will abort loop
[2025-11-30 15:11:39] 2025-11-30 20:11:10,365 | INFO     | all job control threads have been joined
[2025-11-30 15:11:39] 2025-11-30 20:11:10,474 | INFO     | all data control threads have been joined
[2025-11-30 15:11:39] 2025-11-30 20:11:10,813 | INFO     | [job] retrieve thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:10,817 | INFO     | [job] queue monitor thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:10,989 | INFO     | all payload control threads have been joined
[2025-11-30 15:11:39] 2025-11-30 20:11:11,070 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,255 | INFO     | [job] job monitor thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,366 | INFO     | [job] control thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,479 | INFO     | [data] control thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,527 | INFO     | [data] copytool_in thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,549 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,563 | INFO     | [payload] validate_post thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,818 | INFO     | [data] copytool_out thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,848 | INFO     | [payload] failed_post thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,975 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:11,995 | INFO     | [payload] control thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:12,064 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 15:11:39] 2025-11-30 20:11:12,292 | INFO     | [job] validate thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:16,070 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:20,459 | INFO     | job.realtimelogging is not enabled
[2025-11-30 15:11:39] 2025-11-30 20:11:21,464 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 15:11:39] 2025-11-30 20:11:26,183 | INFO     | [monitor] cgroup control has ended
[2025-11-30 15:11:39] 2025-11-30 20:11:28,232 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139741922264896)>', '<ExcThread(monitor, started 139741626349312)>']
[2025-11-30 15:11:39] 2025-11-30 20:11:33,258 | INFO     | all workflow threads have been joined
[2025-11-30 15:11:39] 2025-11-30 20:11:33,258 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 15:11:39] 2025-11-30 20:11:33,265 | INFO     | traces error code: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:33,266 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 15:11:39] 2025-11-30 20:11:39,322 | INFO     | PID=27563 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 15:11:39] 2025-11-30 20:11:39,323 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 15:11:39] 2025-11-30 20:11:39,323 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 15:11:39] 2025-11-30 20:11:39,323 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 15:11:39] 2025-11-30 20:11:39,323 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 15:11:39] 2025-11-30 20:11:39,323 | INFO     | [monitor] control thread has ended
[2025-11-30 15:11:39] 2025-11-30 20:11:39,417 [wrapper] ==== pilot stdout END ====
[2025-11-30 15:11:39] 2025-11-30 20:11:39,421 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 15:11:39] 2025-11-30 20:11:39,425 [wrapper] pilotpid: 27563
[2025-11-30 15:11:39] 2025-11-30 20:11:39,429 [wrapper] Pilot exit status: 0
[2025-11-30 15:11:39] 2025-11-30 20:11:39,444 [wrapper] pandaids: 6896261825
[2025-11-30 15:11:39] 2025-11-30 20:11:39,481 [wrapper] cleanup supervisor_pilot 31798 27564
[2025-11-30 15:11:39] 2025-11-30 20:11:39,485 [wrapper] Test setup, not cleaning
[2025-11-30 15:11:39] 2025-11-30 20:11:39,489 [wrapper] apfmon messages muted
[2025-11-30 15:11:39] 2025-11-30 20:11:39,493 [wrapper] ==== wrapper stdout END ====
[2025-11-30 15:11:39] 2025-11-30 20:11:39,497 [wrapper] ==== wrapper stderr END ====
[2025-11-30 15:11:39]  *** Error codes and diagnostics ***
[2025-11-30 15:11:39]     "exeErrorCode": 0,
[2025-11-30 15:11:39]     "exeErrorDiag": "",
[2025-11-30 15:11:39]     "pilotErrorCode": 0,
[2025-11-30 15:11:39]     "pilotErrorDiag": "",
[2025-11-30 15:11:39]  *** Listing of results directory ***
[2025-11-30 15:11:39] total 1061700
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-11-30 15:11:39] -rwx------ 1 boincer umatlas     36292 Nov 28 05:31 runpilot2-wrapper.sh
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:33 queuedata.json
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas       100 Nov 30 09:00 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 15:11:39] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 09:00 run_atlas
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas       105 Nov 30 09:00 job.xml
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas 375168114 Nov 30 09:00 EVNT.47531050._000404.pool.root.1
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 09:00 start_atlas.sh
[2025-11-30 15:11:39] drwxrwx--x 2 boincer umatlas      4096 Nov 30 09:00 shared
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas    590124 Nov 30 09:00 input.tar.gz
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas         0 Nov 30 09:00 boinc_lockfile
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas      2879 Nov 30 09:00 pandaJob.out
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas        57 Nov 30 09:00 setup.sh.local
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas    991791 Nov 30 09:00 agis_schedconf.cvmfs.json
[2025-11-30 15:11:39] drwx------ 5 boincer umatlas      4096 Nov 30 09:00 pilot3
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas       532 Nov 30 15:01 boinc_task_state.xml
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas      5955 Nov 30 15:10 init_data.xml
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas 697365256 Nov 30 15:10 HITS.47531058._000210.pool.root.1
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas      1060 Nov 30 15:10 memory_monitor_summary.json
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas   1516240 Nov 30 15:10 agis_ddmendpoints.agis.ALL.json
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas   2226368 Nov 30 15:10 log.47531058._000210.job.log.tgz.1
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas        95 Nov 30 15:10 pilot_heartbeat.json
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas     27868 Nov 30 15:11 heartbeat.json
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 15:11 boinc_mmap_file
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas        29 Nov 30 15:11 wrapper_checkpoint.txt
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas       745 Nov 30 15:11 pilotlog.txt
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas   3121377 Nov 30 15:11 log.47531058._000210.job.log.1
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas       353 Nov 30 15:11 output.list
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas       620 Nov 30 15:11 runtime_log
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas   5386240 Nov 30 15:11 result.tar.gz
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas      9340 Nov 30 15:11 runtime_log.err
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas       669 Nov 30 15:11 JS9KDm9vAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmQaOKDm72XdJn.diag
[2025-11-30 15:11:39] -rw-r--r-- 1 boincer umatlas     21294 Nov 30 15:11 stderr.txt
[2025-11-30 15:11:39] HITS file was successfully produced:
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas 697365256 Nov 30 15:10 shared/HITS.pool.root.1
[2025-11-30 15:11:39]  *** Contents of shared directory: ***
[2025-11-30 15:11:39] total 1053260
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas 375168114 Nov 30 09:00 ATLAS.root_0
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 09:00 start_atlas.sh
[2025-11-30 15:11:39] -rw-r--r-- 2 boincer umatlas    590124 Nov 30 09:00 input.tar.gz
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas 697365256 Nov 30 15:10 HITS.pool.root.1
[2025-11-30 15:11:39] -rw------- 1 boincer umatlas   5386240 Nov 30 15:11 result.tar.gz
15:11:41 (23879): run_atlas exited; CPU time 244902.551136
15:11:41 (23879): called boinc_finish(0)

</stderr_txt>
]]>

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