Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:34:08 (28767): wrapper (7.7.26015): starting
07:34:08 (28767): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 07:34:08] Arguments: --nthreads 12
[2025-11-30 07:34:08] Threads: 12
[2025-11-30 07:34:08] Checking for CVMFS
[2025-11-30 07:34:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 07:34:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 07:34:08] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 07:34:08] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 07:34:08] 2.11.2.0 10903 11912 93740 153481 3 81 10616316 20275200 1 130560 0 5175833 99.849 1115528 41769 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 07:34:08] CVMFS is ok
[2025-11-30 07:34:08] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 07:34:08] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 07:34:08] Further information can be found at the LHC@home message board.
[2025-11-30 07:34:08] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 07:34:08] Checking for apptainer binary...
[2025-11-30 07:34:08] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 07:34:08] Running /usr/bin/apptainer --version
[2025-11-30 07:34:08] apptainer version 1.3.2-1.el7
[2025-11-30 07:34:08] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 07:34:10] c-205-22.aglt2.org
[2025-11-30 07:34:10] apptainer works
[2025-11-30 07:34:10] Set ATHENA_PROC_NUMBER=12
[2025-11-30 07:34:10] Set ATHENA_CORE_NUMBER=12
[2025-11-30 07:34:10] Starting ATLAS job with PandaID=6897308769
[2025-11-30 07:34:10] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 13:48:07]  *** The last 200 lines of the pilot log: ***
[2025-11-30 13:48:07] 2025-11-30 18:47:16,853 | INFO     | time since job start (22371s) is within the limit (172800.0s)
[2025-11-30 13:48:07] 2025-11-30 18:47:17,451 | INFO     | monitor loop #1683: job 0:6897308769 is in state 'finished'
[2025-11-30 13:48:07] 2025-11-30 18:47:17,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,859 | INFO     | time since job start (22373s) is within the limit (172800.0s)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,915 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 13:48:07] 2025-11-30 18:47:18,919 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1706.8333333333333
[2025-11-30 13:48:07] 2025-11-30 18:47:18,922 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6897308769/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,923 | INFO     | extracted standard info from prmon json
[2025-11-30 13:48:07] 2025-11-30 18:47:18,923 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 13:48:07] 2025-11-30 18:47:18,923 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 13:48:07] 2025-11-30 18:47:18,930 | INFO     | fitting pss+swap vs Time
[2025-11-30 13:48:07] 2025-11-30 18:47:18,931 | INFO     | sum of square deviations: 15202674520.538279
[2025-11-30 13:48:07] 2025-11-30 18:47:18,934 | INFO     | sum of deviations: 305561941216.24304
[2025-11-30 13:48:07] 2025-11-30 18:47:18,934 | INFO     | mean x: 1764517232.7021859
[2025-11-30 13:48:07] 2025-11-30 18:47:18,934 | INFO     | mean y: 4021116.5710382513
[2025-11-30 13:48:07] 2025-11-30 18:47:18,934 | INFO     | intersect: -35461403747.034004
[2025-11-30 13:48:07] 2025-11-30 18:47:18,935 | INFO     | chi2: 5.118705647614923
[2025-11-30 13:48:07] 2025-11-30 18:47:18,935 | INFO     | sum of square deviations: 14588108822.83094
[2025-11-30 13:48:07] 2025-11-30 18:47:18,938 | INFO     | sum of deviations: 452498395894.1664
[2025-11-30 13:48:07] 2025-11-30 18:47:18,938 | INFO     | mean x: 1764517080.204986
[2025-11-30 13:48:07] 2025-11-30 18:47:18,939 | INFO     | mean y: 4057481.2409972297
[2025-11-30 13:48:07] 2025-11-30 18:47:18,939 | INFO     | intersect: -54728269924.42133
[2025-11-30 13:48:07] 2025-11-30 18:47:18,939 | INFO     | chi2: 2.431890131945128
[2025-11-30 13:48:07] 2025-11-30 18:47:18,939 | INFO     | current chi2=2.431890131945128 (change=52.49013521458741 %)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,940 | INFO     | sum of square deviations: 13990311994.031023
[2025-11-30 13:48:07] 2025-11-30 18:47:18,943 | INFO     | sum of deviations: 449013081640.4073
[2025-11-30 13:48:07] 2025-11-30 18:47:18,943 | INFO     | mean x: 1764516927.7050562
[2025-11-30 13:48:07] 2025-11-30 18:47:18,943 | INFO     | mean y: 4056567.3848314607
[2025-11-30 13:48:07] 2025-11-30 18:47:18,943 | INFO     | intersect: -56627359776.549644
[2025-11-30 13:48:07] 2025-11-30 18:47:18,943 | INFO     | chi2: 2.391819910142789
[2025-11-30 13:48:07] 2025-11-30 18:47:18,944 | INFO     | current chi2=2.391819910142789 (change=1.647698688192337 %)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,944 | INFO     | right removable region: 355
[2025-11-30 13:48:07] 2025-11-30 18:47:18,944 | INFO     | sum of square deviations: 14588063682.83093
[2025-11-30 13:48:07] 2025-11-30 18:47:18,947 | INFO     | sum of deviations: 163650256060.529
[2025-11-30 13:48:07] 2025-11-30 18:47:18,947 | INFO     | mean x: 1764517385.204986
[2025-11-30 13:48:07] 2025-11-30 18:47:18,947 | INFO     | mean y: 4056216.817174515
[2025-11-30 13:48:07] 2025-11-30 18:47:18,947 | INFO     | intersect: -19790464028.656155
[2025-11-30 13:48:07] 2025-11-30 18:47:18,948 | INFO     | chi2: 2.843335826294201
[2025-11-30 13:48:07] 2025-11-30 18:47:18,948 | INFO     | current chi2=2.843335826294201 (change=44.45205444428979 %)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,948 | INFO     | sum of square deviations: 13990243857.617924
[2025-11-30 13:48:07] 2025-11-30 18:47:18,951 | INFO     | sum of deviations: 134370372332.42705
[2025-11-30 13:48:07] 2025-11-30 18:47:18,951 | INFO     | mean x: 1764517537.7078652
[2025-11-30 13:48:07] 2025-11-30 18:47:18,951 | INFO     | mean y: 4063674.811797753
[2025-11-30 13:48:07] 2025-11-30 18:47:18,952 | INFO     | intersect: -16943380625.796223
[2025-11-30 13:48:07] 2025-11-30 18:47:18,952 | INFO     | chi2: 2.798351994369246
[2025-11-30 13:48:07] 2025-11-30 18:47:18,952 | INFO     | current chi2=2.798351994369246 (change=1.5820794543141816 %)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,952 | INFO     | left removable region: 20
[2025-11-30 13:48:07] 2025-11-30 18:47:18,953 | INFO     | sum of square deviations: 11657651251.373081
[2025-11-30 13:48:07] 2025-11-30 18:47:18,955 | INFO     | sum of deviations: 245010997953.08963
[2025-11-30 13:48:07] 2025-11-30 18:47:18,955 | INFO     | mean x: 1764517507.2089553
[2025-11-30 13:48:07] 2025-11-30 18:47:18,955 | INFO     | mean y: 4109815.770149254
[2025-11-30 13:48:07] 2025-11-30 18:47:18,956 | INFO     | intersect: -37081078789.09939
[2025-11-30 13:48:07] 2025-11-30 18:47:18,956 | INFO     | chi2: 0.02052475894373081
[2025-11-30 13:48:07] 2025-11-30 18:47:18,956 | INFO     | current memory leak: 21.02 B/s (using 335 data points, chi2=0.02)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | could have reported an average CPU frequency of 2382 MHz (16 samples)
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | ..............................
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . Timing measurements:
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . get job = 0 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . initial setup = 2 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . payload setup = 13 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . stage-in = 0 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . payload execution = 22328 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,957 | INFO     | . stage-out = 3 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,958 | INFO     | . log creation = 0 s
[2025-11-30 13:48:07] 2025-11-30 18:47:18,958 | INFO     | ..............................
[2025-11-30 13:48:07] 2025-11-30 18:47:19,040 | INFO     | 
[2025-11-30 13:48:07] 2025-11-30 18:47:19,040 | INFO     | job summary report
[2025-11-30 13:48:07] 2025-11-30 18:47:19,040 | INFO     | --------------------------------------------------
[2025-11-30 13:48:07] 2025-11-30 18:47:19,040 | INFO     | PanDA job id: 6897308769
[2025-11-30 13:48:07] 2025-11-30 18:47:19,040 | INFO     | task id: 47538121
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | errors: (none)
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | pilot state: finished 
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | transexitcode: 0
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | exeerrorcode: 0
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | exeerrordiag: 
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | exitcode: 0
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | exitmsg: OK
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | cpuconsumptiontime: 255325 s
[2025-11-30 13:48:07] 2025-11-30 18:47:19,041 | INFO     | nevents: 1000
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | neventsw: 0
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | pid: 7206
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | pgrp: 7206
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | corecount: 12
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | event service: False
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | sizes: {0: 2283622, 1: 2284478, 6: 2284740, 12: 2284768, 22345: 2339614, 22346: 2339613, 22350: 2348791, 22353: 2348847, 22358: 2349093}
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | --------------------------------------------------
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | 
[2025-11-30 13:48:07] 2025-11-30 18:47:19,042 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 13:48:07] 2025-11-30 18:47:19,067 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,067 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,067 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,068 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,068 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,068 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,068 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,070 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 13:48:07] 2025-11-30 18:47:19,071 | INFO     | job 6897308769 has completed (purged errors)
[2025-11-30 13:48:07] 2025-11-30 18:47:19,071 | INFO     | overall cleanup function is called
[2025-11-30 13:48:07] 2025-11-30 18:47:20,088 | INFO     | --- collectZombieJob: --- 10, [7206]
[2025-11-30 13:48:07] 2025-11-30 18:47:20,089 | INFO     | zombie collector waiting for pid 7206
[2025-11-30 13:48:07] 2025-11-30 18:47:20,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 13:48:07] 2025-11-30 18:47:20,089 | INFO     | collected zombie processes
[2025-11-30 13:48:07] 2025-11-30 18:47:20,089 | INFO     | will attempt to kill all subprocesses of pid=7206
[2025-11-30 13:48:07] 2025-11-30 18:47:20,181 | INFO     | process IDs to be killed: [7206] (in reverse order)
[2025-11-30 13:48:07] 2025-11-30 18:47:20,233 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 13:48:07] 2025-11-30 18:47:20,234 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 13:48:07] 2025-11-30 18:47:20,238 | INFO     | did not find any defunct processes belonging to 7206
[2025-11-30 13:48:07] 2025-11-30 18:47:20,242 | INFO     | did not find any defunct processes belonging to 7206
[2025-11-30 13:48:07] 2025-11-30 18:47:20,244 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 13:48:07] 2025-11-30 18:47:20,245 | INFO     | ready for new job
[2025-11-30 13:48:07] 2025-11-30 18:47:20,245 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 13:48:07] 2025-11-30 18:47:20,248 | INFO     | ***************************************
[2025-11-30 13:48:07] 2025-11-30 18:47:20,248 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 13:48:07] 2025-11-30 18:47:20,248 | INFO     | ***************************************
[2025-11-30 13:48:07] 2025-11-30 18:47:20,248 | INFO     | 
[2025-11-30 13:48:07] 2025-11-30 18:47:20,249 | INFO     | architecture information:
[2025-11-30 13:48:07] 2025-11-30 18:47:20,250 | INFO     | executing command: cat /etc/os-release
[2025-11-30 13:48:07] 2025-11-30 18:47:20,265 | INFO     | cat /etc/os-release:
[2025-11-30 13:48:07] NAME="CentOS Linux"
[2025-11-30 13:48:07] VERSION="7 (Core)"
[2025-11-30 13:48:07] ID="centos"
[2025-11-30 13:48:07] ID_LIKE="rhel fedora"
[2025-11-30 13:48:07] VERSION_ID="7"
[2025-11-30 13:48:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 13:48:07] ANSI_COLOR="0;31"
[2025-11-30 13:48:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 13:48:07] HOME_URL="https://www.centos.org/"
[2025-11-30 13:48:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 13:48:07] 
[2025-11-30 13:48:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 13:48:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 13:48:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 13:48:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 13:48:07] 
[2025-11-30 13:48:07] 2025-11-30 18:47:20,266 | INFO     | ***************************************
[2025-11-30 13:48:07] 2025-11-30 18:47:20,769 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 13:48:07] 2025-11-30 18:47:20,785 | INFO     | sufficient remaining disk space (28543287296 B)
[2025-11-30 13:48:07] 2025-11-30 18:47:20,785 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 13:48:07] 2025-11-30 18:47:20,786 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 13:48:07] 2025-11-30 18:47:20,786 | INFO     | update_server=False
[2025-11-30 13:48:07] 2025-11-30 18:47:20,786 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 13:48:07] 2025-11-30 18:47:20,786 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 13:48:07] 2025-11-30 18:47:20,787 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 13:48:07] 2025-11-30 18:47:20,787 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 13:48:07] 2025-11-30 18:47:20,788 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 13:48:07] 2025-11-30 18:47:20,788 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 13:48:07] 2025-11-30 18:47:20,788 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 13:48:07] 2025-11-30 18:47:20,945 | INFO     | all job control threads have been joined
[2025-11-30 13:48:07] 2025-11-30 18:47:20,959 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 13:48:07] 2025-11-30 18:47:20,960 | INFO     | aborting loop
[2025-11-30 13:48:07] 2025-11-30 18:47:21,150 | INFO     | all payload control threads have been joined
[2025-11-30 13:48:07] 2025-11-30 18:47:21,315 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 13:48:07] 2025-11-30 18:47:21,399 | INFO     | all data control threads have been joined
[2025-11-30 13:48:07] 2025-11-30 18:47:21,790 | INFO     | [job] queue monitor thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:21,792 | INFO     | [job] retrieve thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:21,864 | INFO     | [payload] validate_post thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:21,950 | INFO     | [job] control thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:21,955 | INFO     | [job] validate thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:21,965 | INFO     | [job] job monitor thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,156 | INFO     | [payload] control thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,382 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,403 | INFO     | [data] control thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,432 | INFO     | [payload] failed_post thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,472 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,634 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,687 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:22,794 | INFO     | [data] copytool_in thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:23,321 | INFO     | [data] copytool_out thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:47:24,793 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 13:48:07] 2025-11-30 18:48:01,313 | INFO     | [monitor] cgroup control has ended
[2025-11-30 13:48:07] 2025-11-30 18:48:02,169 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352696362816)>', '<ExcThread(monitor, started 140352107292416)>']
[2025-11-30 13:48:07] 2025-11-30 18:48:02,982 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 13:48:07] 2025-11-30 18:48:02,982 | INFO     | [monitor] control thread has ended
[2025-11-30 13:48:07] 2025-11-30 18:48:07,182 | INFO     | all workflow threads have been joined
[2025-11-30 13:48:07] 2025-11-30 18:48:07,182 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 13:48:07] 2025-11-30 18:48:07,183 | INFO     | traces error code: 0
[2025-11-30 13:48:07] 2025-11-30 18:48:07,183 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 13:48:07] 2025-11-30 18:48:07,300 [wrapper] ==== pilot stdout END ====
[2025-11-30 13:48:07] 2025-11-30 18:48:07,304 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 13:48:07] 2025-11-30 18:48:07,308 [wrapper] pilotpid: 32460
[2025-11-30 13:48:07] 2025-11-30 18:48:07,312 [wrapper] Pilot exit status: 0
[2025-11-30 13:48:07] 2025-11-30 18:48:07,326 [wrapper] pandaids: 6897308769
[2025-11-30 13:48:07] 2025-11-30 18:48:07,371 [wrapper] cleanup supervisor_pilot  6272 32461
[2025-11-30 13:48:07] 2025-11-30 18:48:07,375 [wrapper] Test setup, not cleaning
[2025-11-30 13:48:07] 2025-11-30 18:48:07,379 [wrapper] apfmon messages muted
[2025-11-30 13:48:07] 2025-11-30 18:48:07,383 [wrapper] ==== wrapper stdout END ====
[2025-11-30 13:48:07] 2025-11-30 18:48:07,387 [wrapper] ==== wrapper stderr END ====
[2025-11-30 13:48:07]  *** Error codes and diagnostics ***
[2025-11-30 13:48:07]     "exeErrorCode": 0,
[2025-11-30 13:48:07]     "exeErrorDiag": "",
[2025-11-30 13:48:07]     "pilotErrorCode": 0,
[2025-11-30 13:48:07]     "pilotErrorDiag": "",
[2025-11-30 13:48:07]  *** Listing of results directory ***
[2025-11-30 13:48:07] total 1057372
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 05:28 pilot3.tar.gz
[2025-11-30 13:48:07] -rwx------ 1 boincer umatlas     36292 Nov 28 05:29 runpilot2-wrapper.sh
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 05:32 queuedata.json
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas       100 Nov 30 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 13:48:07] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 07:34 run_atlas
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas       105 Nov 30 07:34 job.xml
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas 374975020 Nov 30 07:34 EVNT.47528880._000021.pool.root.1
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 07:34 start_atlas.sh
[2025-11-30 13:48:07] drwxrwx--x 2 boincer umatlas      4096 Nov 30 07:34 shared
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas    590126 Nov 30 07:34 input.tar.gz
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas         0 Nov 30 07:34 boinc_lockfile
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas      2879 Nov 30 07:34 pandaJob.out
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas        57 Nov 30 07:34 setup.sh.local
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas    991788 Nov 30 07:34 agis_schedconf.cvmfs.json
[2025-11-30 13:48:07] drwx------ 5 boincer umatlas      4096 Nov 30 07:34 pilot3
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas       532 Nov 30 13:40 boinc_task_state.xml
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas        95 Nov 30 13:46 pilot_heartbeat.json
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas 693107048 Nov 30 13:46 HITS.47538121._000204.pool.root.1
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas      1061 Nov 30 13:47 memory_monitor_summary.json
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas   1516240 Nov 30 13:47 agis_ddmendpoints.agis.ALL.json
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas   2216488 Nov 30 13:47 log.47538121._000204.job.log.tgz.1
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas      5956 Nov 30 13:47 init_data.xml
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas     28090 Nov 30 13:47 heartbeat.json
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 13:47 boinc_mmap_file
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas        29 Nov 30 13:47 wrapper_checkpoint.txt
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas      4552 Nov 30 13:48 pilotlog.txt
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas   3136976 Nov 30 13:48 log.47538121._000204.job.log.1
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas       353 Nov 30 13:48 output.list
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas       620 Nov 30 13:48 runtime_log
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas   5396480 Nov 30 13:48 result.tar.gz
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas      9345 Nov 30 13:48 runtime_log.err
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas       670 Nov 30 13:48 9bWMDmIuAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmLZOKDmZN7ztm.diag
[2025-11-30 13:48:07] -rw-r--r-- 1 boincer umatlas     21261 Nov 30 13:48 stderr.txt
[2025-11-30 13:48:07] HITS file was successfully produced:
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas 693107048 Nov 30 13:46 shared/HITS.pool.root.1
[2025-11-30 13:48:07]  *** Contents of shared directory: ***
[2025-11-30 13:48:07] total 1048924
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas 374975020 Nov 30 07:34 ATLAS.root_0
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 07:34 start_atlas.sh
[2025-11-30 13:48:07] -rw-r--r-- 2 boincer umatlas    590126 Nov 30 07:34 input.tar.gz
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas 693107048 Nov 30 13:46 HITS.pool.root.1
[2025-11-30 13:48:07] -rw------- 1 boincer umatlas   5396480 Nov 30 13:48 result.tar.gz
13:48:09 (28767): run_atlas exited; CPU time 248283.336114
13:48:09 (28767): called boinc_finish(0)

</stderr_txt>
]]>

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