Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
07:11:28 (20287): wrapper (7.7.26015): starting
07:11:28 (20287): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 07:11:28] Arguments: --nthreads 8
[2025-11-30 07:11:28] Threads: 8
[2025-11-30 07:11:28] Checking for CVMFS
[2025-11-30 07:11:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 07:11:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 07:11:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 07:11:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 07:11:28] 2.11.2.0 17210 123410 146296 153480 0 76 11618279 18432000 1858 130560 0 91595248 99.976 5219561 29626 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 07:11:28] CVMFS is ok
[2025-11-30 07:11:28] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 07:11:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 07:11:28] Further information can be found at the LHC@home message board.
[2025-11-30 07:11:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 07:11:28] Checking for apptainer binary...
[2025-11-30 07:11:28] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 07:11:28] Running /usr/bin/apptainer --version
[2025-11-30 07:11:28] apptainer version 1.3.2-1.el7
[2025-11-30 07:11:28] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 07:11:29] c-206-14.aglt2.org
[2025-11-30 07:11:31] apptainer works
[2025-11-30 07:11:31] Set ATHENA_PROC_NUMBER=8
[2025-11-30 07:11:31] Set ATHENA_CORE_NUMBER=8
[2025-11-30 07:11:31] Starting ATLAS job with PandaID=6901292299
[2025-11-30 07:11:31] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 23:47:27]  *** The last 200 lines of the pilot log: ***
[2025-11-30 23:47:27] 2025-12-01 04:46:50,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,785 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 23:47:27] 2025-12-01 04:46:51,791 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2489.0416666666665
[2025-11-30 23:47:27] 2025-12-01 04:46:51,796 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6901292299/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,797 | INFO     | extracted standard info from prmon json
[2025-11-30 23:47:27] 2025-12-01 04:46:51,797 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 23:47:27] 2025-12-01 04:46:51,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 23:47:27] 2025-12-01 04:46:51,823 | INFO     | fitting pss+swap vs Time
[2025-11-30 23:47:27] 2025-12-01 04:46:51,825 | INFO     | sum of square deviations: 290953908428.81696
[2025-11-30 23:47:27] 2025-12-01 04:46:51,851 | INFO     | sum of deviations: 1653156919320.3657
[2025-11-30 23:47:27] 2025-12-01 04:46:51,851 | INFO     | mean x: 1764534561.6353421
[2025-11-30 23:47:27] 2025-12-01 04:46:51,851 | INFO     | mean y: 3372080.0010214504
[2025-11-30 23:47:27] 2025-12-01 04:46:51,851 | INFO     | intersect: -10022451376.710035
[2025-11-30 23:47:27] 2025-12-01 04:46:51,853 | INFO     | chi2: 6.17279806850772
[2025-11-30 23:47:27] 2025-12-01 04:46:51,854 | INFO     | sum of square deviations: 286518880094.2894
[2025-11-30 23:47:27] 2025-12-01 04:46:51,888 | INFO     | sum of deviations: 2021445501973.8704
[2025-11-30 23:47:27] 2025-12-01 04:46:51,888 | INFO     | time since job start (59709s) is within the limit (172800.0s)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,889 | INFO     | mean x: 1764534409.1386037
[2025-11-30 23:47:27] 2025-12-01 04:46:51,889 | INFO     | mean y: 3384736.0379876797
[2025-11-30 23:47:27] 2025-12-01 04:46:51,889 | INFO     | intersect: -12445743025.656218
[2025-11-30 23:47:27] 2025-12-01 04:46:51,891 | INFO     | chi2: 3.192757129124565
[2025-11-30 23:47:27] 2025-12-01 04:46:51,891 | INFO     | current chi2=3.192757129124565 (change=48.276987296679586 %)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,892 | INFO     | sum of square deviations: 282129154934.73914
[2025-11-30 23:47:27] 2025-12-01 04:46:51,925 | INFO     | sum of deviations: 2171510795986.275
[2025-11-30 23:47:27] 2025-12-01 04:46:51,925 | INFO     | mean x: 1764534256.6418989
[2025-11-30 23:47:27] 2025-12-01 04:46:51,926 | INFO     | mean y: 3389947.0670794635
[2025-11-30 23:47:27] 2025-12-01 04:46:51,926 | INFO     | intersect: -13577996879.373571
[2025-11-30 23:47:27] 2025-12-01 04:46:51,927 | INFO     | chi2: 2.603528527283448
[2025-11-30 23:47:27] 2025-12-01 04:46:51,927 | INFO     | current chi2=2.603528527283448 (change=18.4551651757702 %)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,927 | INFO     | right removable region: 968
[2025-11-30 23:47:27] 2025-12-01 04:46:51,928 | INFO     | sum of square deviations: 286518500674.28937
[2025-11-30 23:47:27] 2025-12-01 04:46:51,945 | INFO     | sum of deviations: 1339252342318.3933
[2025-11-30 23:47:27] 2025-12-01 04:46:51,945 | INFO     | mean x: 1764534714.1386037
[2025-11-30 23:47:27] 2025-12-01 04:46:51,945 | INFO     | mean y: 3382858.9229979464
[2025-11-30 23:47:27] 2025-12-01 04:46:51,945 | INFO     | intersect: -8244451900.266424
[2025-11-30 23:47:27] 2025-12-01 04:46:51,946 | INFO     | chi2: 3.8986823629000464
[2025-11-30 23:47:27] 2025-12-01 04:46:51,946 | INFO     | current chi2=3.8986823629000464 (change=36.840921740332305 %)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,947 | INFO     | sum of square deviations: 282128396094.73895
[2025-11-30 23:47:27] 2025-12-01 04:46:51,964 | INFO     | sum of deviations: 1254318298425.782
[2025-11-30 23:47:27] 2025-12-01 04:46:51,964 | INFO     | mean x: 1764534866.6418989
[2025-11-30 23:47:27] 2025-12-01 04:46:51,964 | INFO     | mean y: 3385808.3797729616
[2025-11-30 23:47:27] 2025-12-01 04:46:51,964 | INFO     | intersect: -7841582660.146899
[2025-11-30 23:47:27] 2025-12-01 04:46:51,965 | INFO     | chi2: 3.8158211243042603
[2025-11-30 23:47:27] 2025-12-01 04:46:51,965 | INFO     | current chi2=3.8158211243042603 (change=2.1253652101616587 %)
[2025-11-30 23:47:27] 2025-12-01 04:46:51,966 | INFO     | left removable region: 20
[2025-11-30 23:47:27] 2025-12-01 04:46:51,967 | INFO     | sum of square deviations: 264180253784.89423
[2025-11-30 23:47:27] 2025-12-01 04:46:51,997 | INFO     | sum of deviations: 1667140094629.7163
[2025-11-30 23:47:27] 2025-12-01 04:46:51,997 | INFO     | mean x: 1764534836.1561182
[2025-11-30 23:47:27] 2025-12-01 04:46:51,997 | INFO     | mean y: 3408784.2383966246
[2025-11-30 23:47:27] 2025-12-01 04:46:51,998 | INFO     | intersect: -11131892706.243212
[2025-11-30 23:47:27] 2025-12-01 04:46:51,999 | INFO     | chi2: 0.14680420275033346
[2025-11-30 23:47:27] 2025-12-01 04:46:51,999 | INFO     | current memory leak: 6.31 B/s (using 948 data points, chi2=0.15)
[2025-11-30 23:47:27] 2025-12-01 04:46:52,000 | INFO     | could have reported an average CPU frequency of 2633 MHz (36 samples)
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | ..............................
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | . Timing measurements:
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | . get job = 0 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | . initial setup = 2 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | . payload setup = 9 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,001 | INFO     | . stage-in = 0 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,002 | INFO     | . payload execution = 59669 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,002 | INFO     | . stage-out = 3 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,002 | INFO     | . log creation = 0 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,002 | INFO     | ..............................
[2025-11-30 23:47:27] 2025-12-01 04:46:52,160 | INFO     | 
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | job summary report
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | --------------------------------------------------
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | PanDA job id: 6901292299
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | task id: 47531111
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | errors: (none)
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | pilot state: finished 
[2025-11-30 23:47:27] 2025-12-01 04:46:52,161 | INFO     | transexitcode: 0
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | exeerrorcode: 0
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | exeerrordiag: 
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | exitcode: 0
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | exitmsg: OK
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | cpuconsumptiontime: 459452 s
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | nevents: 1000
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | neventsw: 0
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | pid: 32205
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | pgrp: 32205
[2025-11-30 23:47:27] 2025-12-01 04:46:52,162 | INFO     | corecount: 8
[2025-11-30 23:47:27] 2025-12-01 04:46:52,163 | INFO     | event service: False
[2025-11-30 23:47:27] 2025-12-01 04:46:52,163 | INFO     | sizes: {0: 2284279, 1: 2284478, 4: 2284740, 12: 2284768, 59682: 2356523, 59683: 2356522, 59687: 2365700, 59690: 2365756, 59694: 2366002}
[2025-11-30 23:47:27] 2025-12-01 04:46:52,163 | INFO     | --------------------------------------------------
[2025-11-30 23:47:27] 2025-12-01 04:46:52,163 | INFO     | 
[2025-11-30 23:47:27] 2025-12-01 04:46:52,163 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 23:47:27] 2025-12-01 04:46:52,183 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,184 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,185 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 23:47:27] 2025-12-01 04:46:52,186 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,186 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 23:47:27] 2025-12-01 04:46:52,186 | INFO     | job 6901292299 has completed (purged errors)
[2025-11-30 23:47:27] 2025-12-01 04:46:52,186 | INFO     | overall cleanup function is called
[2025-11-30 23:47:27] 2025-12-01 04:46:53,199 | INFO     | --- collectZombieJob: --- 10, [32205]
[2025-11-30 23:47:27] 2025-12-01 04:46:53,199 | INFO     | zombie collector waiting for pid 32205
[2025-11-30 23:47:27] 2025-12-01 04:46:53,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 23:47:27] 2025-12-01 04:46:53,199 | INFO     | collected zombie processes
[2025-11-30 23:47:27] 2025-12-01 04:46:53,199 | INFO     | will attempt to kill all subprocesses of pid=32205
[2025-11-30 23:47:27] 2025-12-01 04:46:53,372 | INFO     | process IDs to be killed: [32205] (in reverse order)
[2025-11-30 23:47:27] 2025-12-01 04:46:53,418 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 23:47:27] 2025-12-01 04:46:53,418 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 23:47:27] 2025-12-01 04:46:53,421 | INFO     | did not find any defunct processes belonging to 32205
[2025-11-30 23:47:27] 2025-12-01 04:46:53,424 | INFO     | did not find any defunct processes belonging to 32205
[2025-11-30 23:47:27] 2025-12-01 04:46:53,426 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 23:47:27] 2025-12-01 04:46:53,426 | INFO     | ready for new job
[2025-11-30 23:47:27] 2025-12-01 04:46:53,426 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 23:47:27] 2025-12-01 04:46:53,429 | INFO     | ***************************************
[2025-11-30 23:47:27] 2025-12-01 04:46:53,430 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 23:47:27] 2025-12-01 04:46:53,430 | INFO     | ***************************************
[2025-11-30 23:47:27] 2025-12-01 04:46:53,430 | INFO     | 
[2025-11-30 23:47:27] 2025-12-01 04:46:53,431 | INFO     | architecture information:
[2025-11-30 23:47:27] 2025-12-01 04:46:53,431 | INFO     | executing command: cat /etc/os-release
[2025-11-30 23:47:27] 2025-12-01 04:46:53,442 | INFO     | cat /etc/os-release:
[2025-11-30 23:47:27] NAME="CentOS Linux"
[2025-11-30 23:47:27] VERSION="7 (Core)"
[2025-11-30 23:47:27] ID="centos"
[2025-11-30 23:47:27] ID_LIKE="rhel fedora"
[2025-11-30 23:47:27] VERSION_ID="7"
[2025-11-30 23:47:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 23:47:27] ANSI_COLOR="0;31"
[2025-11-30 23:47:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 23:47:27] HOME_URL="https://www.centos.org/"
[2025-11-30 23:47:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 23:47:27] 
[2025-11-30 23:47:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 23:47:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 23:47:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 23:47:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 23:47:27] 
[2025-11-30 23:47:27] 2025-12-01 04:46:53,442 | INFO     | ***************************************
[2025-11-30 23:47:27] 2025-12-01 04:46:53,948 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 23:47:27] 2025-12-01 04:46:53,967 | INFO     | sufficient remaining disk space (25999441920 B)
[2025-11-30 23:47:27] 2025-12-01 04:46:53,968 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 23:47:27] 2025-12-01 04:46:53,968 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 23:47:27] 2025-12-01 04:46:53,968 | INFO     | update_server=False
[2025-11-30 23:47:27] 2025-12-01 04:46:53,968 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 23:47:27] 2025-12-01 04:46:53,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:47:27] 2025-12-01 04:46:53,969 | INFO     | aborting loop
[2025-11-30 23:47:27] 2025-12-01 04:46:53,969 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:47:27] 2025-12-01 04:46:53,971 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 23:47:27] 2025-12-01 04:46:54,254 | INFO     | all payload control threads have been joined
[2025-11-30 23:47:27] 2025-12-01 04:46:54,347 | INFO     | all data control threads have been joined
[2025-11-30 23:47:27] 2025-12-01 04:46:54,384 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 23:47:27] 2025-12-01 04:46:54,458 | INFO     | all job control threads have been joined
[2025-11-30 23:47:27] 2025-12-01 04:46:54,974 | INFO     | [job] retrieve thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:54,974 | INFO     | [job] queue monitor thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:54,975 | INFO     | [job] job monitor thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:54,995 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,097 | INFO     | [payload] failed_post thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,261 | INFO     | [payload] control thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,354 | INFO     | [data] control thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,372 | INFO     | [job] validate thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,464 | INFO     | [job] control thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,578 | INFO     | [data] copytool_in thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,674 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,941 | INFO     | [payload] validate_post thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:55,977 | INFO     | [data] copytool_out thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:56,437 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:46:58,392 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:47:04,301 | INFO     | job.realtimelogging is not enabled
[2025-11-30 23:47:27] 2025-12-01 04:47:05,307 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 23:47:27] 2025-12-01 04:47:20,987 | INFO     | [monitor] cgroup control has ended
[2025-11-30 23:47:27] 2025-12-01 04:47:21,777 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140585757329216)>', '<ExcThread(monitor, started 140585327380224)>']
[2025-11-30 23:47:27] 2025-12-01 04:47:25,121 | INFO     | PID=23996 has CPU usage=7.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 23:47:27] 2025-12-01 04:47:25,121 | INFO     | .. there are 3 such processes running
[2025-11-30 23:47:27] 2025-12-01 04:47:25,122 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 23:47:27] 2025-12-01 04:47:25,122 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 23:47:27] 2025-12-01 04:47:25,122 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 23:47:27] 2025-12-01 04:47:25,122 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 23:47:27] 2025-12-01 04:47:25,123 | INFO     | [monitor] control thread has ended
[2025-11-30 23:47:27] 2025-12-01 04:47:26,793 | INFO     | all workflow threads have been joined
[2025-11-30 23:47:27] 2025-12-01 04:47:26,793 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 23:47:27] 2025-12-01 04:47:26,793 | INFO     | traces error code: 0
[2025-11-30 23:47:27] 2025-12-01 04:47:26,794 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 23:47:27] 2025-12-01 04:47:26,910 [wrapper] ==== pilot stdout END ====
[2025-11-30 23:47:27] 2025-12-01 04:47:26,912 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 23:47:27] 2025-12-01 04:47:26,914 [wrapper] pilotpid: 23996
[2025-11-30 23:47:27] 2025-12-01 04:47:26,916 [wrapper] Pilot exit status: 0
[2025-11-30 23:47:27] 2025-12-01 04:47:26,924 [wrapper] pandaids: 6901292299
[2025-11-30 23:47:27] 2025-12-01 04:47:26,954 [wrapper] cleanup supervisor_pilot 22693 23997
[2025-11-30 23:47:27] 2025-12-01 04:47:26,956 [wrapper] Test setup, not cleaning
[2025-11-30 23:47:27] 2025-12-01 04:47:26,958 [wrapper] apfmon messages muted
[2025-11-30 23:47:27] 2025-12-01 04:47:26,960 [wrapper] ==== wrapper stdout END ====
[2025-11-30 23:47:27] 2025-12-01 04:47:26,962 [wrapper] ==== wrapper stderr END ====
[2025-11-30 23:47:27]  *** Error codes and diagnostics ***
[2025-11-30 23:47:27]     "exeErrorCode": 0,
[2025-11-30 23:47:27]     "exeErrorDiag": "",
[2025-11-30 23:47:27]     "pilotErrorCode": 0,
[2025-11-30 23:47:27]     "pilotErrorDiag": "",
[2025-11-30 23:47:27]  *** Listing of results directory ***
[2025-11-30 23:47:27] total 1065724
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-11-30 23:47:27] -rwx------ 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 04:26 queuedata.json
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas       100 Nov 30 07:11 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 23:47:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 07:11 run_atlas
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas       105 Nov 30 07:11 job.xml
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas 373940732 Nov 30 07:11 EVNT.47531104._000091.pool.root.1
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 07:11 start_atlas.sh
[2025-11-30 23:47:27] drwxrwx--x 2 boincer umatlas      4096 Nov 30 07:11 shared
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas    590122 Nov 30 07:11 input.tar.gz
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas         0 Nov 30 07:11 boinc_lockfile
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas      2879 Nov 30 07:11 pandaJob.out
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas        57 Nov 30 07:11 setup.sh.local
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas    991788 Nov 30 07:11 agis_schedconf.cvmfs.json
[2025-11-30 23:47:27] drwx------ 5 boincer umatlas      4096 Nov 30 07:11 pilot3
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas       533 Nov 30 23:33 boinc_task_state.xml
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas      5954 Nov 30 23:45 init_data.xml
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas 692175469 Nov 30 23:46 HITS.47531111._000897.pool.root.1
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas      1067 Nov 30 23:46 memory_monitor_summary.json
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas   1516240 Nov 30 23:46 agis_ddmendpoints.agis.ALL.json
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas   2302717 Nov 30 23:46 log.47531111._000897.job.log.tgz.1
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas     28439 Nov 30 23:46 heartbeat.json
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 23:47 boinc_mmap_file
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas        29 Nov 30 23:47 wrapper_checkpoint.txt
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas        95 Nov 30 23:47 pilot_heartbeat.json
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas      4893 Nov 30 23:47 pilotlog.txt
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas   8311263 Nov 30 23:47 log.47531111._000897.job.log.1
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas       353 Nov 30 23:47 output.list
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas       620 Nov 30 23:47 runtime_log
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas  10649600 Nov 30 23:47 result.tar.gz
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas      9343 Nov 30 23:47 runtime_log.err
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas       667 Nov 30 23:47 fkMMDmTLWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBDPKDmdiegSm.diag
[2025-11-30 23:47:27] -rw-r--r-- 1 boincer umatlas     21310 Nov 30 23:47 stderr.txt
[2025-11-30 23:47:27] HITS file was successfully produced:
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas 692175469 Nov 30 23:46 shared/HITS.pool.root.1
[2025-11-30 23:47:27]  *** Contents of shared directory: ***
[2025-11-30 23:47:27] total 1052136
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas 373940732 Nov 30 07:11 ATLAS.root_0
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 07:11 start_atlas.sh
[2025-11-30 23:47:27] -rw-r--r-- 2 boincer umatlas    590122 Nov 30 07:11 input.tar.gz
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas 692175469 Nov 30 23:46 HITS.pool.root.1
[2025-11-30 23:47:27] -rw------- 1 boincer umatlas  10649600 Nov 30 23:47 result.tar.gz
23:47:29 (20287): run_atlas exited; CPU time 458129.098160
23:47:29 (20287): called boinc_finish(0)

</stderr_txt>
]]>

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