Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
17:28:12 (11812): wrapper (7.7.26015): starting
17:28:12 (11812): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 17:28:12] Arguments: --nthreads 8
[2025-12-01 17:28:12] Threads: 8
[2025-12-01 17:28:12] Checking for CVMFS
[2025-12-01 17:28:13] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 17:28:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 17:28:14] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 17:28:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 17:28:15] 2.11.2.0 29171 292790 141572 153525 0 60 22294972 25165825 2504 130560 10 148426404 99.877 84388629 3466 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 17:28:15] CVMFS is ok
[2025-12-01 17:28:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 17:28:15] Checking for apptainer binary...
[2025-12-01 17:28:15] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 17:28:15] Running /usr/bin/apptainer --version
[2025-12-01 17:28:15] apptainer version 1.3.2-1.el7
[2025-12-01 17:28:15] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 17:28:30] cg-vwn473.simple-grid.lan
[2025-12-01 17:28:30] apptainer works
[2025-12-01 17:28:30] Set ATHENA_PROC_NUMBER=8
[2025-12-01 17:28:30] Set ATHENA_CORE_NUMBER=8
[2025-12-01 17:28:30] Starting ATLAS job with PandaID=6901109349
[2025-12-01 17:28:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 12:07:10]  *** The last 200 lines of the pilot log: ***
[2025-12-02 12:07:10] 2025-12-02 11:06:32,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 12:07:10] 2025-12-02 11:06:33,793 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 12:07:10] 2025-12-02 11:06:33,794 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 2249.998
[2025-12-02 12:07:10] 2025-12-02 11:06:33,796 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6901109349/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 12:07:10] 2025-12-02 11:06:33,797 | INFO     | extracted standard info from prmon json
[2025-12-02 12:07:10] 2025-12-02 11:06:33,797 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 12:07:10] 2025-12-02 11:06:33,797 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 12:07:10] 2025-12-02 11:06:33,814 | INFO     | fitting pss+swap vs Time
[2025-12-02 12:07:10] 2025-12-02 11:06:33,816 | INFO     | sum of square deviations: 396066119274.954
[2025-12-02 12:07:10] 2025-12-02 11:06:33,850 | INFO     | sum of deviations: 2636633097471.7065
[2025-12-02 12:07:10] 2025-12-02 11:06:33,851 | INFO     | mean x: 1764640416.0064516
[2025-12-02 12:07:10] 2025-12-02 11:06:33,851 | INFO     | mean y: 3329895.613824885
[2025-12-02 12:07:10] 2025-12-02 11:06:33,851 | INFO     | intersect: -11743974656.707357
[2025-12-02 12:07:10] 2025-12-02 11:06:33,852 | INFO     | chi2: 18.854160494136547
[2025-12-02 12:07:10] 2025-12-02 11:06:33,854 | INFO     | sum of square deviations: 390616080369.8665
[2025-12-02 12:07:10] 2025-12-02 11:06:33,902 | INFO     | sum of deviations: 3102019750406.6245
[2025-12-02 12:07:10] 2025-12-02 11:06:33,903 | INFO     | mean x: 1764640263.511111
[2025-12-02 12:07:10] 2025-12-02 11:06:33,903 | INFO     | mean y: 3342918.0314814816
[2025-12-02 12:07:10] 2025-12-02 11:06:33,903 | INFO     | intersect: -14010286384.149433
[2025-12-02 12:07:10] 2025-12-02 11:06:33,908 | INFO     | chi2: 15.10302925803863
[2025-12-02 12:07:10] 2025-12-02 11:06:33,908 | INFO     | current chi2=15.10302925803863 (change=19.895509202143906 %)
[2025-12-02 12:07:10] 2025-12-02 11:06:33,909 | INFO     | right removable region: 1079
[2025-12-02 12:07:10] 2025-12-02 11:06:33,910 | INFO     | sum of square deviations: 390615414249.86633
[2025-12-02 12:07:10] 2025-12-02 11:06:33,964 | INFO     | sum of deviations: 2086083320836.3057
[2025-12-02 12:07:10] 2025-12-02 11:06:33,965 | INFO     | mean x: 1764640568.511111
[2025-12-02 12:07:10] 2025-12-02 11:06:33,965 | INFO     | mean y: 3345299.474074074
[2025-12-02 12:07:10] 2025-12-02 11:06:33,965 | INFO     | intersect: -9420725341.23896
[2025-12-02 12:07:10] 2025-12-02 11:06:33,966 | INFO     | chi2: 13.733805008563705
[2025-12-02 12:07:10] 2025-12-02 11:06:33,966 | INFO     | current chi2=13.733805008563705 (change=27.157695444277252 %)
[2025-12-02 12:07:10] 2025-12-02 11:06:33,968 | INFO     | sum of square deviations: 385214942724.7314
[2025-12-02 12:07:10] 2025-12-02 11:06:34,004 | INFO     | sum of deviations: 1591637768558.759
[2025-12-02 12:07:10] 2025-12-02 11:06:34,005 | INFO     | mean x: 1764640721.015814
[2025-12-02 12:07:10] 2025-12-02 11:06:34,005 | INFO     | mean y: 3359258.7786046513
[2025-12-02 12:07:10] 2025-12-02 11:06:34,005 | INFO     | intersect: -7287813818.877838
[2025-12-02 12:07:10] 2025-12-02 11:06:34,006 | INFO     | chi2: 9.72457171050717
[2025-12-02 12:07:10] 2025-12-02 11:06:34,006 | INFO     | current chi2=9.72457171050717 (change=29.192443722308415 %)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,008 | INFO     | sum of square deviations: 379864537469.088
[2025-12-02 12:07:10] 2025-12-02 11:06:34,037 | INFO     | sum of deviations: 1296007633592.9058
[2025-12-02 12:07:10] 2025-12-02 11:06:34,037 | INFO     | mean x: 1764640873.5196261
[2025-12-02 12:07:10] 2025-12-02 11:06:34,037 | INFO     | mean y: 3367675.552336449
[2025-12-02 12:07:10] 2025-12-02 11:06:34,038 | INFO     | intersect: -6017168112.992008
[2025-12-02 12:07:10] 2025-12-02 11:06:34,039 | INFO     | chi2: 8.128894753800301
[2025-12-02 12:07:10] 2025-12-02 11:06:34,039 | INFO     | current chi2=8.128894753800301 (change=16.408711912554235 %)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,039 | INFO     | left removable region: 30
[2025-12-02 12:07:10] 2025-12-02 11:06:34,040 | INFO     | sum of square deviations: 357935093548.30536
[2025-12-02 12:07:10] 2025-12-02 11:06:34,100 | INFO     | sum of deviations: 1659775311351.7483
[2025-12-02 12:07:10] 2025-12-02 11:06:34,100 | INFO     | mean x: 1764641148.0257387
[2025-12-02 12:07:10] 2025-12-02 11:06:34,100 | INFO     | mean y: 3388963.453765491
[2025-12-02 12:07:10] 2025-12-02 11:06:34,100 | INFO     | intersect: -8179401334.791339
[2025-12-02 12:07:10] 2025-12-02 11:06:34,101 | INFO     | chi2: 3.5555699345806757
[2025-12-02 12:07:10] 2025-12-02 11:06:34,102 | INFO     | current memory leak: 4.64 B/s (using 1049 data points, chi2=3.56)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,103 | INFO     | could have reported an average CPU frequency of 2249 MHz (38 samples)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,103 | INFO     | ..............................
[2025-12-02 12:07:10] 2025-12-02 11:06:34,103 | INFO     | . Timing measurements:
[2025-12-02 12:07:10] 2025-12-02 11:06:34,103 | INFO     | . get job = 0 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,103 | INFO     | . initial setup = 5 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | . payload setup = 308 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | . stage-in = 0 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | . payload execution = 66281 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | . stage-out = 4 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | . log creation = 1 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,108 | INFO     | ..............................
[2025-12-02 12:07:10] 2025-12-02 11:06:34,123 | INFO     | time since job start (66883s) is within the limit (172800.0s)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,218 | INFO     | 
[2025-12-02 12:07:10] 2025-12-02 11:06:34,218 | INFO     | job summary report
[2025-12-02 12:07:10] 2025-12-02 11:06:34,218 | INFO     | --------------------------------------------------
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | PanDA job id: 6901109349
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | task id: 47531058
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | errors: (none)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | pilot state: finished 
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | transexitcode: 0
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | exeerrorcode: 0
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | exeerrordiag: 
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | exitcode: 0
[2025-12-02 12:07:10] 2025-12-02 11:06:34,219 | INFO     | exitmsg: OK
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | cpuconsumptiontime: 243546 s
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | nevents: 1000
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | neventsw: 0
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | pid: 22916
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | pgrp: 22916
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | corecount: 8
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | event service: False
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | sizes: {0: 2283625, 1: 2284311, 2: 2284510, 13: 2284510, 23: 2284566, 34: 2284594, 45: 2284750, 56: 2284778, 66: 2284806, 77: 2284834, 88: 2284890, 89: 2285460, 98
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | --------------------------------------------------
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | 
[2025-12-02 12:07:10] 2025-12-02 11:06:34,220 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 12:07:10] 2025-12-02 11:06:34,304 | INFO     | job 6901109349 has completed (purged errors)
[2025-12-02 12:07:10] 2025-12-02 11:06:34,305 | INFO     | overall cleanup function is called
[2025-12-02 12:07:10] 2025-12-02 11:06:35,319 | INFO     | --- collectZombieJob: --- 10, [22916]
[2025-12-02 12:07:10] 2025-12-02 11:06:35,319 | INFO     | zombie collector waiting for pid 22916
[2025-12-02 12:07:10] 2025-12-02 11:06:35,320 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 12:07:10] 2025-12-02 11:06:35,320 | INFO     | collected zombie processes
[2025-12-02 12:07:10] 2025-12-02 11:06:35,320 | INFO     | will attempt to kill all subprocesses of pid=22916
[2025-12-02 12:07:10] 2025-12-02 11:06:35,442 | INFO     | process IDs to be killed: [22916] (in reverse order)
[2025-12-02 12:07:10] 2025-12-02 11:06:36,261 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 12:07:10] 2025-12-02 11:06:36,261 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 12:07:10] 2025-12-02 11:06:36,264 | INFO     | did not find any defunct processes belonging to 22916
[2025-12-02 12:07:10] 2025-12-02 11:06:36,266 | INFO     | did not find any defunct processes belonging to 22916
[2025-12-02 12:07:10] 2025-12-02 11:06:36,346 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 12:07:10] 2025-12-02 11:06:36,347 | INFO     | ready for new job
[2025-12-02 12:07:10] 2025-12-02 11:06:36,347 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 12:07:10] 2025-12-02 11:06:36,351 | INFO     | ***************************************
[2025-12-02 12:07:10] 2025-12-02 11:06:36,351 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 12:07:10] 2025-12-02 11:06:36,351 | INFO     | ***************************************
[2025-12-02 12:07:10] 2025-12-02 11:06:36,351 | INFO     | 
[2025-12-02 12:07:10] 2025-12-02 11:06:36,352 | INFO     | pilot is running in a VM
[2025-12-02 12:07:10] 2025-12-02 11:06:36,352 | INFO     | architecture information:
[2025-12-02 12:07:10] 2025-12-02 11:06:36,371 | INFO     | executing command: cat /etc/os-release
[2025-12-02 12:07:10] 2025-12-02 11:06:36,703 | INFO     | cat /etc/os-release:
[2025-12-02 12:07:10] NAME="CentOS Linux"
[2025-12-02 12:07:10] VERSION="7 (Core)"
[2025-12-02 12:07:10] ID="centos"
[2025-12-02 12:07:10] ID_LIKE="rhel fedora"
[2025-12-02 12:07:10] VERSION_ID="7"
[2025-12-02 12:07:10] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 12:07:10] ANSI_COLOR="0;31"
[2025-12-02 12:07:10] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 12:07:10] HOME_URL="https://www.centos.org/"
[2025-12-02 12:07:10] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 12:07:10] 
[2025-12-02 12:07:10] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 12:07:10] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 12:07:10] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 12:07:10] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 12:07:10] 
[2025-12-02 12:07:10] 2025-12-02 11:06:36,703 | INFO     | ***************************************
[2025-12-02 12:07:10] 2025-12-02 11:06:37,205 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-12-02 12:07:10] 2025-12-02 11:06:37,477 | INFO     | sufficient remaining disk space (488912191488 B)
[2025-12-02 12:07:10] 2025-12-02 11:06:37,478 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 12:07:10] 2025-12-02 11:06:37,478 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 12:07:10] 2025-12-02 11:06:37,478 | INFO     | update_server=False
[2025-12-02 12:07:10] 2025-12-02 11:06:37,478 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 12:07:10] 2025-12-02 11:06:38,225 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 12:07:10] 2025-12-02 11:06:38,225 | INFO     | aborting loop
[2025-12-02 12:07:10] 2025-12-02 11:06:38,309 | INFO     | all data control threads have been joined
[2025-12-02 12:07:10] 2025-12-02 11:06:38,484 | INFO     | [job] retrieve thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:38,619 | INFO     | all payload control threads have been joined
[2025-12-02 12:07:10] 2025-12-02 11:06:38,663 | INFO     | [job] validate thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:38,676 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:38,744 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 12:07:10] 2025-12-02 11:06:38,790 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 12:07:10] 2025-12-02 11:06:39,079 | INFO     | [payload] validate_post thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,166 | INFO     | all job control threads have been joined
[2025-12-02 12:07:10] 2025-12-02 11:06:39,231 | INFO     | [job] job monitor thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,238 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 12:07:10] 2025-12-02 11:06:39,304 | INFO     | [payload] failed_post thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,315 | INFO     | [data] control thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,392 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,625 | INFO     | [payload] control thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,747 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:39,949 | INFO     | [data] copytool_in thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:40,172 | INFO     | [job] control thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:40,244 | INFO     | [job] queue monitor thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:40,751 | INFO     | [data] copytool_out thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:43,022 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 12:07:10] 2025-12-02 11:06:47,454 | INFO     | [monitor] cgroup control has ended
[2025-12-02 12:07:10] 2025-12-02 11:06:48,243 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140438470121280)>', '<ExcThread(monitor, started 140437905991424)>']
[2025-12-02 12:07:10] 2025-12-02 11:06:53,268 | INFO     | all workflow threads have been joined
[2025-12-02 12:07:10] 2025-12-02 11:06:53,268 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 12:07:10] 2025-12-02 11:06:53,269 | INFO     | traces error code: 0
[2025-12-02 12:07:10] 2025-12-02 11:06:53,269 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 12:07:10] 2025-12-02 11:07:07,264 | INFO     | PID=15612 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 12:07:10] 2025-12-02 11:07:07,265 | INFO     | .. there are 9 such processes running
[2025-12-02 12:07:10] 2025-12-02 11:07:07,268 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 12:07:10] 2025-12-02 11:07:07,268 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 12:07:10] 2025-12-02 11:07:07,268 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 12:07:10] 2025-12-02 11:07:07,268 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 12:07:10] 2025-12-02 11:07:07,269 | INFO     | [monitor] control thread has ended
[2025-12-02 12:07:10] 2025-12-02 11:07:07,612 [wrapper] ==== pilot stdout END ====
[2025-12-02 12:07:10] 2025-12-02 11:07:07,702 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 12:07:10] 2025-12-02 11:07:07,793 [wrapper] pilotpid: 15612
[2025-12-02 12:07:10] 2025-12-02 11:07:07,891 [wrapper] Pilot exit status: 0
[2025-12-02 12:07:10] 2025-12-02 11:07:08,290 [wrapper] pandaids: 6901109349
[2025-12-02 12:07:10] 2025-12-02 11:07:08,498 [wrapper] cleanup supervisor_pilot  3809 15613
[2025-12-02 12:07:10] 2025-12-02 11:07:08,512 [wrapper] Test setup, not cleaning
[2025-12-02 12:07:10] 2025-12-02 11:07:08,526 [wrapper] apfmon messages muted
[2025-12-02 12:07:10] 2025-12-02 11:07:08,604 [wrapper] ==== wrapper stdout END ====
[2025-12-02 12:07:10] 2025-12-02 11:07:08,734 [wrapper] ==== wrapper stderr END ====
[2025-12-02 12:07:10]  *** Error codes and diagnostics ***
[2025-12-02 12:07:10]     "exeErrorCode": 0,
[2025-12-02 12:07:10]     "exeErrorDiag": "",
[2025-12-02 12:07:10]     "pilotErrorCode": 0,
[2025-12-02 12:07:10]     "pilotErrorDiag": "",
[2025-12-02 12:07:10]  *** Listing of results directory ***
[2025-12-02 12:07:10] total 1072072
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc    576529 Nov 29 10:19 pilot3.tar.gz
[2025-12-02 12:07:10] -rwx------. 1 boinc boinc     36292 Nov 29 10:22 runpilot2-wrapper.sh
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc      5112 Nov 29 10:26 queuedata.json
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc       100 Dec  1 17:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 12:07:10] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 17:28 run_atlas
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc       105 Dec  1 17:28 job.xml
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc      6393 Dec  1 17:28 init_data.xml
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc 377436279 Dec  1 17:28 EVNT.47531050._000542.pool.root.1
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc     15847 Dec  1 17:28 start_atlas.sh
[2025-12-02 12:07:10] drwxrwx--x. 2 boinc boinc        68 Dec  1 17:28 shared
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc    590126 Dec  1 17:28 input.tar.gz
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc         0 Dec  1 17:28 boinc_lockfile
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc      2880 Dec  1 17:28 pandaJob.out
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc    992142 Dec  1 17:31 agis_schedconf.cvmfs.json
[2025-12-02 12:07:10] drwx------. 5 boinc boinc      4096 Dec  1 17:31 pilot3
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc       533 Dec  2 11:47 boinc_task_state.xml
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc 693815799 Dec  2 12:04 HITS.47531058._001580.pool.root.1
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc      1032 Dec  2 12:04 memory_monitor_summary.json
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc   1516240 Dec  2 12:04 agis_ddmendpoints.agis.ALL.json
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc   2338680 Dec  2 12:04 log.47531058._001580.job.log.tgz.1
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc     28125 Dec  2 12:06 heartbeat.json
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc        29 Dec  2 12:06 wrapper_checkpoint.txt
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc      8192 Dec  2 12:06 boinc_mmap_file
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc        95 Dec  2 12:07 pilot_heartbeat.json
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc       820 Dec  2 12:07 pilotlog.txt
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc   8971874 Dec  2 12:07 log.47531058._001580.job.log.1
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc       353 Dec  2 12:07 output.list
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc       620 Dec  2 12:07 runtime_log
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc  11345920 Dec  2 12:07 result.tar.gz
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc      8833 Dec  2 12:07 runtime_log.err
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc       661 Dec  2 12:07 qLpMDm8KWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmsAPKDmX572zm.diag
[2025-12-02 12:07:10] -rw-r--r--. 1 boinc boinc     21014 Dec  2 12:07 stderr.txt
[2025-12-02 12:07:10] HITS file was successfully produced:
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc 693815799 Dec  2 12:04 shared/HITS.pool.root.1
[2025-12-02 12:07:10]  *** Contents of shared directory: ***
[2025-12-02 12:07:10] total 1057824
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc 377436279 Dec  1 17:28 ATLAS.root_0
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc     15847 Dec  1 17:28 start_atlas.sh
[2025-12-02 12:07:10] -rw-r--r--. 2 boinc boinc    590126 Dec  1 17:28 input.tar.gz
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc 693815799 Dec  2 12:04 HITS.pool.root.1
[2025-12-02 12:07:10] -rw-------. 1 boinc boinc  11345920 Dec  2 12:07 result.tar.gz
12:07:12 (11812): run_atlas exited; CPU time 243867.507997
12:07:12 (11812): called boinc_finish(0)

</stderr_txt>
]]>

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