Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
06:38:36 (16263): wrapper (7.7.26015): starting
06:38:36 (16263): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 06:38:36] Arguments: --nthreads 8
[2025-11-30 06:38:36] Threads: 8
[2025-11-30 06:38:36] Checking for CVMFS
[2025-11-30 06:38:37] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 06:38:37] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 06:38:37] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 06:38:37] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 06:38:37] 2.11.2.0 2880 159108 86740 153479 0 69 13093097 20275200 1 130560 0 61874834 99.972 5868486 22846 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-30 06:38:37] CVMFS is ok
[2025-11-30 06:38:37] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 06:38:37] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 06:38:37] Further information can be found at the LHC@home message board.
[2025-11-30 06:38:37] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 06:38:37] Checking for apptainer binary...
[2025-11-30 06:38:37] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 06:38:37] Running /usr/bin/apptainer --version
[2025-11-30 06:38:37] apptainer version 1.3.2-1.el7
[2025-11-30 06:38:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 06:38:39] c-115-10.aglt2.org
[2025-11-30 06:38:39] apptainer works
[2025-11-30 06:38:39] Set ATHENA_PROC_NUMBER=8
[2025-11-30 06:38:39] Set ATHENA_CORE_NUMBER=8
[2025-11-30 06:38:39] Starting ATLAS job with PandaID=6900545934
[2025-11-30 06:38:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 16:07:59]  *** The last 200 lines of the pilot log: ***
[2025-11-30 16:07:59] 2025-11-30 21:06:52,125 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,412 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 16:07:59] 2025-11-30 21:06:52,415 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-30 16:07:59] 2025-11-30 21:06:52,417 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6900545934/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,418 | INFO     | extracted standard info from prmon json
[2025-11-30 16:07:59] 2025-11-30 21:06:52,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 16:07:59] 2025-11-30 21:06:52,418 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 16:07:59] 2025-11-30 21:06:52,426 | INFO     | fitting pss+swap vs Time
[2025-11-30 16:07:59] 2025-11-30 21:06:52,427 | INFO     | sum of square deviations: 53873876218.659584
[2025-11-30 16:07:59] 2025-11-30 21:06:52,433 | INFO     | sum of deviations: 535239642910.954
[2025-11-30 16:07:59] 2025-11-30 21:06:52,433 | INFO     | mean x: 1764519764.1146953
[2025-11-30 16:07:59] 2025-11-30 21:06:52,433 | INFO     | mean y: 3600392.0788530465
[2025-11-30 16:07:59] 2025-11-30 21:06:52,433 | INFO     | intersect: -17526991329.60901
[2025-11-30 16:07:59] 2025-11-30 21:06:52,434 | INFO     | chi2: 4.969351464603553
[2025-11-30 16:07:59] 2025-11-30 21:06:52,434 | INFO     | sum of square deviations: 52438688804.25302
[2025-11-30 16:07:59] 2025-11-30 21:06:52,441 | INFO     | sum of deviations: 724766942505.9869
[2025-11-30 16:07:59] 2025-11-30 21:06:52,441 | INFO     | mean x: 1764519611.620253
[2025-11-30 16:07:59] 2025-11-30 21:06:52,441 | INFO     | mean y: 3620502.090415913
[2025-11-30 16:07:59] 2025-11-30 21:06:52,441 | INFO     | intersect: -24384202936.43424
[2025-11-30 16:07:59] 2025-11-30 21:06:52,442 | INFO     | chi2: 2.7335677948751096
[2025-11-30 16:07:59] 2025-11-30 21:06:52,442 | INFO     | current chi2=2.7335677948751096 (change=44.9914578522735 %)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,442 | INFO     | sum of square deviations: 51029189191.56208
[2025-11-30 16:07:59] 2025-11-30 21:06:52,448 | INFO     | sum of deviations: 759158624721.73
[2025-11-30 16:07:59] 2025-11-30 21:06:52,448 | INFO     | mean x: 1764519459.1240876
[2025-11-30 16:07:59] 2025-11-30 21:06:52,448 | INFO     | mean y: 3624201.4598540147
[2025-11-30 16:07:59] 2025-11-30 21:06:52,449 | INFO     | intersect: -26247041096.2924
[2025-11-30 16:07:59] 2025-11-30 21:06:52,449 | INFO     | chi2: 2.524736258069687
[2025-11-30 16:07:59] 2025-11-30 21:06:52,449 | INFO     | current chi2=2.524736258069687 (change=7.639522868133724 %)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,449 | INFO     | right removable region: 547
[2025-11-30 16:07:59] 2025-11-30 21:06:52,450 | INFO     | sum of square deviations: 52438479574.25306
[2025-11-30 16:07:59] 2025-11-30 21:06:52,456 | INFO     | sum of deviations: 338252677589.56964
[2025-11-30 16:07:59] 2025-11-30 21:06:52,456 | INFO     | mean x: 1764519916.620253
[2025-11-30 16:07:59] 2025-11-30 21:06:52,457 | INFO     | mean y: 3621275.5027124775
[2025-11-30 16:07:59] 2025-11-30 21:06:52,457 | INFO     | intersect: -11378356068.28694
[2025-11-30 16:07:59] 2025-11-30 21:06:52,457 | INFO     | chi2: 2.5444813982203347
[2025-11-30 16:07:59] 2025-11-30 21:06:52,457 | INFO     | current chi2=2.5444813982203347 (change=48.79650963823848 %)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,458 | INFO     | sum of square deviations: 51028871442.8084
[2025-11-30 16:07:59] 2025-11-30 21:06:52,464 | INFO     | sum of deviations: 305099079826.7025
[2025-11-30 16:07:59] 2025-11-30 21:06:52,464 | INFO     | mean x: 1764520069.1222627
[2025-11-30 16:07:59] 2025-11-30 21:06:52,464 | INFO     | mean y: 3624858.8850364964
[2025-11-30 16:07:59] 2025-11-30 21:06:52,464 | INFO     | intersect: -10546352716.619879
[2025-11-30 16:07:59] 2025-11-30 21:06:52,465 | INFO     | chi2: 2.5153827855497597
[2025-11-30 16:07:59] 2025-11-30 21:06:52,465 | INFO     | current chi2=2.5153827855497597 (change=1.1435969895840938 %)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,465 | INFO     | left removable region: 20
[2025-11-30 16:07:59] 2025-11-30 21:06:52,466 | INFO     | sum of square deviations: 45384489220.31861
[2025-11-30 16:07:59] 2025-11-30 21:06:52,471 | INFO     | sum of deviations: 493439154595.25824
[2025-11-30 16:07:59] 2025-11-30 21:06:52,471 | INFO     | mean x: 1764520038.6337762
[2025-11-30 16:07:59] 2025-11-30 21:06:52,472 | INFO     | mean y: 3653213.3225806453
[2025-11-30 16:07:59] 2025-11-30 21:06:52,472 | INFO     | intersect: -19180946879.962997
[2025-11-30 16:07:59] 2025-11-30 21:06:52,472 | INFO     | chi2: 0.04440561440915177
[2025-11-30 16:07:59] 2025-11-30 21:06:52,472 | INFO     | current memory leak: 10.87 B/s (using 527 data points, chi2=0.04)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | could have reported an average CPU frequency of 2392 MHz (22 samples)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | ..............................
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | . Timing measurements:
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | . get job = 0 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | . initial setup = 2 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,473 | INFO     | . payload setup = 15 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,474 | INFO     | . stage-in = 0 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,474 | INFO     | . payload execution = 34031 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,474 | INFO     | . stage-out = 3 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,474 | INFO     | . log creation = 0 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,474 | INFO     | ..............................
[2025-11-30 16:07:59] 2025-11-30 21:06:52,555 | INFO     | 
[2025-11-30 16:07:59] 2025-11-30 21:06:52,555 | INFO     | job summary report
[2025-11-30 16:07:59] 2025-11-30 21:06:52,555 | INFO     | --------------------------------------------------
[2025-11-30 16:07:59] 2025-11-30 21:06:52,555 | INFO     | PanDA job id: 6900545934
[2025-11-30 16:07:59] 2025-11-30 21:06:52,556 | INFO     | task id: 47530783
[2025-11-30 16:07:59] 2025-11-30 21:06:52,556 | INFO     | errors: (none)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,556 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 16:07:59] 2025-11-30 21:06:52,556 | INFO     | pilot state: finished 
[2025-11-30 16:07:59] 2025-11-30 21:06:52,556 | INFO     | transexitcode: 0
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | exeerrorcode: 0
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | exeerrordiag: 
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | exitcode: 0
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | exitmsg: OK
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | cpuconsumptiontime: 264480 s
[2025-11-30 16:07:59] 2025-11-30 21:06:52,557 | INFO     | nevents: 1000
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | neventsw: 0
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | pid: 27575
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | pgrp: 27575
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | corecount: 8
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | event service: False
[2025-11-30 16:07:59] 2025-11-30 21:06:52,558 | INFO     | sizes: {0: 2284278, 1: 2284477, 6: 2284739, 11: 2284767, 34047: 2344544, 34048: 2344543, 34051: 2353721, 34053: 2353777, 34059: 2354023}
[2025-11-30 16:07:59] 2025-11-30 21:06:52,559 | INFO     | --------------------------------------------------
[2025-11-30 16:07:59] 2025-11-30 21:06:52,559 | INFO     | 
[2025-11-30 16:07:59] 2025-11-30 21:06:52,559 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 16:07:59] 2025-11-30 21:06:52,590 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,590 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,590 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,590 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,593 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,593 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,593 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,593 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 16:07:59] 2025-11-30 21:06:52,593 | INFO     | job 6900545934 has completed (purged errors)
[2025-11-30 16:07:59] 2025-11-30 21:06:52,594 | INFO     | overall cleanup function is called
[2025-11-30 16:07:59] 2025-11-30 21:06:53,609 | INFO     | --- collectZombieJob: --- 10, [27575]
[2025-11-30 16:07:59] 2025-11-30 21:06:53,609 | INFO     | zombie collector waiting for pid 27575
[2025-11-30 16:07:59] 2025-11-30 21:06:53,609 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 16:07:59] 2025-11-30 21:06:53,609 | INFO     | collected zombie processes
[2025-11-30 16:07:59] 2025-11-30 21:06:53,609 | INFO     | will attempt to kill all subprocesses of pid=27575
[2025-11-30 16:07:59] 2025-11-30 21:06:53,694 | INFO     | process IDs to be killed: [27575] (in reverse order)
[2025-11-30 16:07:59] 2025-11-30 21:06:53,751 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 16:07:59] 2025-11-30 21:06:53,751 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 16:07:59] 2025-11-30 21:06:53,756 | INFO     | did not find any defunct processes belonging to 27575
[2025-11-30 16:07:59] 2025-11-30 21:06:53,759 | INFO     | did not find any defunct processes belonging to 27575
[2025-11-30 16:07:59] 2025-11-30 21:06:53,762 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 16:07:59] 2025-11-30 21:06:53,762 | INFO     | ready for new job
[2025-11-30 16:07:59] 2025-11-30 21:06:53,762 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 16:07:59] 2025-11-30 21:06:53,765 | INFO     | ***************************************
[2025-11-30 16:07:59] 2025-11-30 21:06:53,766 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 16:07:59] 2025-11-30 21:06:53,766 | INFO     | ***************************************
[2025-11-30 16:07:59] 2025-11-30 21:06:53,766 | INFO     | 
[2025-11-30 16:07:59] 2025-11-30 21:06:53,766 | INFO     | architecture information:
[2025-11-30 16:07:59] 2025-11-30 21:06:53,767 | INFO     | executing command: cat /etc/os-release
[2025-11-30 16:07:59] 2025-11-30 21:06:53,787 | INFO     | cat /etc/os-release:
[2025-11-30 16:07:59] NAME="CentOS Linux"
[2025-11-30 16:07:59] VERSION="7 (Core)"
[2025-11-30 16:07:59] ID="centos"
[2025-11-30 16:07:59] ID_LIKE="rhel fedora"
[2025-11-30 16:07:59] VERSION_ID="7"
[2025-11-30 16:07:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 16:07:59] ANSI_COLOR="0;31"
[2025-11-30 16:07:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 16:07:59] HOME_URL="https://www.centos.org/"
[2025-11-30 16:07:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 16:07:59] 
[2025-11-30 16:07:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 16:07:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 16:07:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 16:07:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 16:07:59] 
[2025-11-30 16:07:59] 2025-11-30 21:06:53,787 | INFO     | ***************************************
[2025-11-30 16:07:59] 2025-11-30 21:06:54,291 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 16:07:59] 2025-11-30 21:06:54,311 | INFO     | sufficient remaining disk space (17757634560 B)
[2025-11-30 16:07:59] 2025-11-30 21:06:54,312 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 16:07:59] 2025-11-30 21:06:54,312 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 16:07:59] 2025-11-30 21:06:54,312 | INFO     | update_server=False
[2025-11-30 16:07:59] 2025-11-30 21:06:54,312 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 16:07:59] 2025-11-30 21:06:54,313 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:07:59] 2025-11-30 21:06:54,628 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 16:07:59] 2025-11-30 21:06:54,629 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 16:07:59] 2025-11-30 21:06:54,629 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 16:07:59] 2025-11-30 21:06:54,629 | INFO     | will abort loop
[2025-11-30 16:07:59] 2025-11-30 21:06:54,883 | INFO     | all payload control threads have been joined
[2025-11-30 16:07:59] 2025-11-30 21:06:55,185 | INFO     | all data control threads have been joined
[2025-11-30 16:07:59] 2025-11-30 21:06:55,256 | INFO     | all job control threads have been joined
[2025-11-30 16:07:59] 2025-11-30 21:06:55,318 | INFO     | [job] retrieve thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,319 | INFO     | [job] queue monitor thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,395 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,469 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 16:07:59] 2025-11-30 21:06:55,584 | INFO     | [data] copytool_in thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,632 | INFO     | [job] job monitor thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,662 | INFO     | [payload] validate_post thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,685 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,844 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,888 | INFO     | [payload] control thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:55,961 | INFO     | [job] validate thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:56,191 | INFO     | [data] control thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:56,261 | INFO     | [job] control thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:56,622 | INFO     | [payload] failed_post thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:06:57,256 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 16:07:59] 2025-11-30 21:06:57,475 | INFO     | [data] copytool_out thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:07:01,262 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:07:05,206 | INFO     | job.realtimelogging is not enabled
[2025-11-30 16:07:59] 2025-11-30 21:07:06,212 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 16:07:59] 2025-11-30 21:07:24,198 | INFO     | PID=19941 has CPU usage=1.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 16:07:59] 2025-11-30 21:07:24,199 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 16:07:59] 2025-11-30 21:07:24,199 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 16:07:59] 2025-11-30 21:07:24,199 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 16:07:59] 2025-11-30 21:07:52,974 | INFO     | [monitor] cgroup control has ended
[2025-11-30 16:07:59] 2025-11-30 21:07:53,975 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139974782936896)>', '<ExcThread(monitor, started 139973378434816)>']
[2025-11-30 16:07:59] 2025-11-30 21:07:54,316 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 16:07:59] 2025-11-30 21:07:54,316 | INFO     | [monitor] control thread has ended
[2025-11-30 16:07:59] 2025-11-30 21:07:58,976 | INFO     | all workflow threads have been joined
[2025-11-30 16:07:59] 2025-11-30 21:07:58,976 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 16:07:59] 2025-11-30 21:07:58,977 | INFO     | traces error code: 0
[2025-11-30 16:07:59] 2025-11-30 21:07:58,977 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 16:07:59] 2025-11-30 21:07:59,092 [wrapper] ==== pilot stdout END ====
[2025-11-30 16:07:59] 2025-11-30 21:07:59,097 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 16:07:59] 2025-11-30 21:07:59,101 [wrapper] pilotpid: 19941
[2025-11-30 16:07:59] 2025-11-30 21:07:59,106 [wrapper] Pilot exit status: 0
[2025-11-30 16:07:59] 2025-11-30 21:07:59,124 [wrapper] pandaids: 6900545934
[2025-11-30 16:07:59] 2025-11-30 21:07:59,181 [wrapper] cleanup supervisor_pilot  1334 19942
[2025-11-30 16:07:59] 2025-11-30 21:07:59,186 [wrapper] Test setup, not cleaning
[2025-11-30 16:07:59] 2025-11-30 21:07:59,191 [wrapper] apfmon messages muted
[2025-11-30 16:07:59] 2025-11-30 21:07:59,196 [wrapper] ==== wrapper stdout END ====
[2025-11-30 16:07:59] 2025-11-30 21:07:59,201 [wrapper] ==== wrapper stderr END ====
[2025-11-30 16:07:59]  *** Error codes and diagnostics ***
[2025-11-30 16:07:59]     "exeErrorCode": 0,
[2025-11-30 16:07:59]     "exeErrorDiag": "",
[2025-11-30 16:07:59]     "pilotErrorCode": 0,
[2025-11-30 16:07:59]     "pilotErrorDiag": "",
[2025-11-30 16:07:59]  *** Listing of results directory ***
[2025-11-30 16:07:59] total 1064188
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas    576529 Nov 29 04:19 pilot3.tar.gz
[2025-11-30 16:07:59] -rwx------ 1 boincer umatlas     36292 Nov 29 04:22 runpilot2-wrapper.sh
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas      5112 Nov 29 04:26 queuedata.json
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas       100 Nov 30 06:38 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 16:07:59] -rwxr-xr-x 1 boincer umatlas      7986 Nov 30 06:38 run_atlas
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas       105 Nov 30 06:38 job.xml
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas 377727227 Nov 30 06:38 EVNT.47530775._000064.pool.root.1
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 06:38 start_atlas.sh
[2025-11-30 16:07:59] drwxrwx--x 2 boincer umatlas      4096 Nov 30 06:38 shared
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas    590118 Nov 30 06:38 input.tar.gz
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas         0 Nov 30 06:38 boinc_lockfile
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas      2878 Nov 30 06:38 pandaJob.out
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas        57 Nov 30 06:38 setup.sh.local
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas    991788 Nov 30 06:38 agis_schedconf.cvmfs.json
[2025-11-30 16:07:59] drwx------ 5 boincer umatlas      4096 Nov 30 06:38 pilot3
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas       532 Nov 30 15:58 boinc_task_state.xml
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas      5913 Nov 30 16:01 init_data.xml
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas 694807740 Nov 30 16:06 HITS.47530783._000634.pool.root.1
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas      1060 Nov 30 16:06 memory_monitor_summary.json
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas   1516240 Nov 30 16:06 agis_ddmendpoints.agis.ALL.json
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas   1927340 Nov 30 16:06 log.47530783._000634.job.log.tgz.1
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas     27634 Nov 30 16:06 heartbeat.json
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas        95 Nov 30 16:07 pilot_heartbeat.json
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 16:07 boinc_mmap_file
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas        29 Nov 30 16:07 wrapper_checkpoint.txt
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas      5004 Nov 30 16:07 pilotlog.txt
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas   4690405 Nov 30 16:07 log.47530783._000634.job.log.1
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas       353 Nov 30 16:07 output.list
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas       620 Nov 30 16:07 runtime_log
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas   6656000 Nov 30 16:07 result.tar.gz
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas      9343 Nov 30 16:07 runtime_log.err
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas       667 Nov 30 16:07 bP5NDmwKWj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmM9OKDmIQI0dn.diag
[2025-11-30 16:07:59] -rw-r--r-- 1 boincer umatlas     21290 Nov 30 16:07 stderr.txt
[2025-11-30 16:07:59] HITS file was successfully produced:
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas 694807740 Nov 30 16:06 shared/HITS.pool.root.1
[2025-11-30 16:07:59]  *** Contents of shared directory: ***
[2025-11-30 16:07:59] total 1054504
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas 377727227 Nov 30 06:38 ATLAS.root_0
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas     15847 Nov 30 06:38 start_atlas.sh
[2025-11-30 16:07:59] -rw-r--r-- 2 boincer umatlas    590118 Nov 30 06:38 input.tar.gz
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas 694807740 Nov 30 16:06 HITS.pool.root.1
[2025-11-30 16:07:59] -rw------- 1 boincer umatlas   6656000 Nov 30 16:07 result.tar.gz
16:08:01 (16263): run_atlas exited; CPU time 262533.927007
16:08:01 (16263): called boinc_finish(0)

</stderr_txt>
]]>

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