Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
04:16:52 (8851): wrapper (7.7.26015): starting
04:16:52 (8851): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 04:16:52] Arguments: --nthreads 8
[2025-12-02 04:16:52] Threads: 8
[2025-12-02 04:16:52] Checking for CVMFS
[2025-12-02 04:16:52] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 04:16:52] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 04:16:52] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 04:16:52] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 04:16:52] 2.11.2.0 19320 86853 112876 153542 2 210 19274031 25165825 2285 130560 11 28721547 99.885 17951059 1569 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-02 04:16:52] CVMFS is ok
[2025-12-02 04:16:52] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 04:16:52] Checking for apptainer binary...
[2025-12-02 04:16:52] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 04:16:52] Running /usr/bin/apptainer --version
[2025-12-02 04:16:52] apptainer version 1.3.2-1.el7
[2025-12-02 04:16:52] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 04:16:54] cg-vwn360.simple-grid.lan
[2025-12-02 04:16:54] apptainer works
[2025-12-02 04:16:54] Set ATHENA_PROC_NUMBER=8
[2025-12-02 04:16:54] Set ATHENA_CORE_NUMBER=8
[2025-12-02 04:16:54] Starting ATLAS job with PandaID=6896261811
[2025-12-02 04:16:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 00:54:36]  *** The last 200 lines of the pilot log: ***
[2025-12-03 00:54:36] 2025-12-02 23:53:58,277 | INFO     | fitting pss+swap vs Time
[2025-12-03 00:54:36] 2025-12-02 23:53:58,279 | INFO     | sum of square deviations: 554796880344.3728
[2025-12-03 00:54:36] 2025-12-02 23:53:58,310 | INFO     | time since job start (74203s) is within the limit (172800.0s)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,334 | INFO     | sum of deviations: 2465448849214.1367
[2025-12-03 00:54:36] 2025-12-02 23:53:58,334 | INFO     | mean x: 1764682496.5304778
[2025-12-03 00:54:36] 2025-12-02 23:53:58,334 | INFO     | mean y: 3372385.847611203
[2025-12-03 00:54:36] 2025-12-02 23:53:58,334 | INFO     | intersect: -7838658787.072493
[2025-12-03 00:54:36] 2025-12-02 23:53:58,336 | INFO     | chi2: 11.598993037270144
[2025-12-03 00:54:36] 2025-12-02 23:53:58,338 | INFO     | sum of square deviations: 547970464126.5408
[2025-12-03 00:54:36] 2025-12-02 23:53:58,391 | INFO     | sum of deviations: 2972539377597.827
[2025-12-03 00:54:36] 2025-12-02 23:53:58,391 | INFO     | mean x: 1764682344.0347395
[2025-12-03 00:54:36] 2025-12-02 23:53:58,391 | INFO     | mean y: 3383715.551695616
[2025-12-03 00:54:36] 2025-12-02 23:53:58,391 | INFO     | intersect: -9569372664.586988
[2025-12-03 00:54:36] 2025-12-02 23:53:58,393 | INFO     | chi2: 8.090814439805431
[2025-12-03 00:54:36] 2025-12-02 23:53:58,393 | INFO     | current chi2=8.090814439805431 (change=30.245544472629266 %)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,395 | INFO     | sum of square deviations: 541200281521.16547
[2025-12-03 00:54:36] 2025-12-02 23:53:58,438 | INFO     | sum of deviations: 3471850951049.337
[2025-12-03 00:54:36] 2025-12-02 23:53:58,438 | INFO     | mean x: 1764682191.5390365
[2025-12-03 00:54:36] 2025-12-02 23:53:58,438 | INFO     | mean y: 3394958.8438538206
[2025-12-03 00:54:36] 2025-12-02 23:53:58,438 | INFO     | intersect: -11317208067.773432
[2025-12-03 00:54:36] 2025-12-02 23:53:58,440 | INFO     | chi2: 4.5654440125558695
[2025-12-03 00:54:36] 2025-12-02 23:53:58,441 | INFO     | current chi2=4.5654440125558695 (change=43.57250377545848 %)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,442 | INFO     | sum of square deviations: 534485953445.9145
[2025-12-03 00:54:36] 2025-12-02 23:53:58,492 | INFO     | sum of deviations: 3531102768597.6064
[2025-12-03 00:54:36] 2025-12-02 23:53:58,492 | INFO     | mean x: 1764682039.0417013
[2025-12-03 00:54:36] 2025-12-02 23:53:58,492 | INFO     | mean y: 3396300.52793995
[2025-12-03 00:54:36] 2025-12-02 23:53:58,492 | INFO     | intersect: -11655045972.05308
[2025-12-03 00:54:36] 2025-12-02 23:53:58,494 | INFO     | chi2: 4.381540520569423
[2025-12-03 00:54:36] 2025-12-02 23:53:58,494 | INFO     | current chi2=4.381540520569423 (change=4.0281622440375 %)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,494 | INFO     | right removable region: 1198
[2025-12-03 00:54:36] 2025-12-02 23:53:58,496 | INFO     | sum of square deviations: 547969701016.5405
[2025-12-03 00:54:36] 2025-12-02 23:53:58,538 | INFO     | sum of deviations: 1943841145552.2053
[2025-12-03 00:54:36] 2025-12-02 23:53:58,538 | INFO     | mean x: 1764682649.0347395
[2025-12-03 00:54:36] 2025-12-02 23:53:58,538 | INFO     | mean y: 3384034.6617038874
[2025-12-03 00:54:36] 2025-12-02 23:53:58,538 | INFO     | intersect: -6256565622.540685
[2025-12-03 00:54:36] 2025-12-02 23:53:58,540 | INFO     | chi2: 8.15751594869573
[2025-12-03 00:54:36] 2025-12-02 23:53:58,540 | INFO     | current chi2=8.15751594869573 (change=29.67048154539091 %)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,542 | INFO     | sum of square deviations: 541198902435.3172
[2025-12-03 00:54:36] 2025-12-02 23:53:58,588 | INFO     | sum of deviations: 1717817250079.8374
[2025-12-03 00:54:36] 2025-12-02 23:53:58,588 | INFO     | mean x: 1764682801.5373755
[2025-12-03 00:54:36] 2025-12-02 23:53:58,588 | INFO     | mean y: 3389120.1702657808
[2025-12-03 00:54:36] 2025-12-02 23:53:58,589 | INFO     | intersect: -5597883431.860497
[2025-12-03 00:54:36] 2025-12-02 23:53:58,590 | INFO     | chi2: 7.46157510564799
[2025-12-03 00:54:36] 2025-12-02 23:53:58,590 | INFO     | current chi2=7.46157510564799 (change=8.531283878875055 %)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,591 | INFO     | left removable region: 20
[2025-12-03 00:54:36] 2025-12-02 23:53:58,592 | INFO     | sum of square deviations: 506890567407.6439
[2025-12-03 00:54:36] 2025-12-02 23:53:58,635 | INFO     | sum of deviations: 2640025159378.9575
[2025-12-03 00:54:36] 2025-12-02 23:53:58,635 | INFO     | mean x: 1764682618.549236
[2025-12-03 00:54:36] 2025-12-02 23:53:58,635 | INFO     | mean y: 3416574.1731748725
[2025-12-03 00:54:36] 2025-12-02 23:53:58,635 | INFO     | intersect: -9187534709.680737
[2025-12-03 00:54:36] 2025-12-02 23:53:58,637 | INFO     | chi2: 0.13010816245880844
[2025-12-03 00:54:36] 2025-12-02 23:53:58,637 | INFO     | current memory leak: 5.21 B/s (using 1178 data points, chi2=0.13)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,638 | INFO     | could have reported an average CPU frequency of 1999 MHz (41 samples)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | ..............................
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . Timing measurements:
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . get job = 0 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . initial setup = 2 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . payload setup = 23 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . stage-in = 0 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . payload execution = 74059 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . stage-out = 4 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | . log creation = 1 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,639 | INFO     | ..............................
[2025-12-03 00:54:36] 2025-12-02 23:53:58,773 | INFO     | 
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | job summary report
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | --------------------------------------------------
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | PanDA job id: 6896261811
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | task id: 47531058
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | errors: (none)
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | pilot state: finished 
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | transexitcode: 0
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | exeerrorcode: 0
[2025-12-03 00:54:36] 2025-12-02 23:53:58,774 | INFO     | exeerrordiag: 
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | exitcode: 0
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | exitmsg: OK
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | cpuconsumptiontime: 277823 s
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | nevents: 1000
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | neventsw: 0
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | pid: 19787
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | pgrp: 19787
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | corecount: 8
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | event service: False
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | sizes: {0: 2284278, 1: 2284477, 9: 2284739, 12: 2284767, 74087: 2360624, 74092: 2369802, 74183: 2370088}
[2025-12-03 00:54:36] 2025-12-02 23:53:58,775 | INFO     | --------------------------------------------------
[2025-12-03 00:54:36] 2025-12-02 23:53:58,776 | INFO     | 
[2025-12-03 00:54:36] 2025-12-02 23:53:58,776 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-12-03 00:54:36] 2025-12-02 23:53:59,186 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,187 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,188 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 00:54:36] 2025-12-02 23:53:59,189 | INFO     | job 6896261811 has completed (purged errors)
[2025-12-03 00:54:36] 2025-12-02 23:53:59,190 | INFO     | overall cleanup function is called
[2025-12-03 00:54:36] 2025-12-02 23:54:00,209 | INFO     | --- collectZombieJob: --- 10, [19787]
[2025-12-03 00:54:36] 2025-12-02 23:54:00,210 | INFO     | zombie collector waiting for pid 19787
[2025-12-03 00:54:36] 2025-12-02 23:54:00,210 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 00:54:36] 2025-12-02 23:54:00,210 | INFO     | collected zombie processes
[2025-12-03 00:54:36] 2025-12-02 23:54:00,210 | INFO     | will attempt to kill all subprocesses of pid=19787
[2025-12-03 00:54:36] 2025-12-02 23:54:00,334 | INFO     | process IDs to be killed: [19787] (in reverse order)
[2025-12-03 00:54:36] 2025-12-02 23:54:01,137 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 00:54:36] 2025-12-02 23:54:01,137 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 00:54:36] 2025-12-02 23:54:01,141 | INFO     | did not find any defunct processes belonging to 19787
[2025-12-03 00:54:36] 2025-12-02 23:54:01,150 | INFO     | did not find any defunct processes belonging to 19787
[2025-12-03 00:54:36] 2025-12-02 23:54:01,196 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 00:54:36] 2025-12-02 23:54:01,196 | INFO     | ready for new job
[2025-12-03 00:54:36] 2025-12-02 23:54:01,196 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 00:54:36] 2025-12-02 23:54:01,201 | INFO     | ***************************************
[2025-12-03 00:54:36] 2025-12-02 23:54:01,201 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 00:54:36] 2025-12-02 23:54:01,201 | INFO     | ***************************************
[2025-12-03 00:54:36] 2025-12-02 23:54:01,201 | INFO     | 
[2025-12-03 00:54:36] 2025-12-02 23:54:01,202 | INFO     | pilot is running in a VM
[2025-12-03 00:54:36] 2025-12-02 23:54:01,202 | INFO     | architecture information:
[2025-12-03 00:54:36] 2025-12-02 23:54:01,209 | INFO     | executing command: cat /etc/os-release
[2025-12-03 00:54:36] 2025-12-02 23:54:01,383 | INFO     | cat /etc/os-release:
[2025-12-03 00:54:36] NAME="CentOS Linux"
[2025-12-03 00:54:36] VERSION="7 (Core)"
[2025-12-03 00:54:36] ID="centos"
[2025-12-03 00:54:36] ID_LIKE="rhel fedora"
[2025-12-03 00:54:36] VERSION_ID="7"
[2025-12-03 00:54:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 00:54:36] ANSI_COLOR="0;31"
[2025-12-03 00:54:36] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 00:54:36] HOME_URL="https://www.centos.org/"
[2025-12-03 00:54:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 00:54:36] 
[2025-12-03 00:54:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 00:54:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 00:54:36] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 00:54:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 00:54:36] 
[2025-12-03 00:54:36] 2025-12-02 23:54:01,383 | INFO     | ***************************************
[2025-12-03 00:54:36] 2025-12-02 23:54:01,887 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-12-03 00:54:36] 2025-12-02 23:54:02,138 | INFO     | sufficient remaining disk space (492986957824 B)
[2025-12-03 00:54:36] 2025-12-02 23:54:02,138 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 00:54:36] 2025-12-02 23:54:02,139 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 00:54:36] 2025-12-02 23:54:02,139 | INFO     | update_server=False
[2025-12-03 00:54:36] 2025-12-02 23:54:02,139 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 00:54:36] 2025-12-02 23:54:02,139 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:54:36] 2025-12-02 23:54:02,140 | INFO     | aborting loop
[2025-12-03 00:54:36] 2025-12-02 23:54:02,144 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 00:54:36] 2025-12-02 23:54:02,157 | INFO     | all payload control threads have been joined
[2025-12-03 00:54:36] 2025-12-02 23:54:02,633 | INFO     | all data control threads have been joined
[2025-12-03 00:54:36] 2025-12-02 23:54:03,145 | INFO     | [job] retrieve thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,145 | INFO     | [job] job monitor thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,163 | INFO     | [payload] control thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,248 | INFO     | [payload] failed_post thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,369 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,436 | INFO     | all job control threads have been joined
[2025-12-03 00:54:36] 2025-12-02 23:54:03,639 | INFO     | [data] control thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,745 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,757 | INFO     | [data] copytool_in thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,788 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 00:54:36] 2025-12-02 23:54:03,817 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:03,897 | INFO     | [job] validate thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,155 | INFO     | [data] copytool_out thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,210 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,389 | INFO     | [payload] validate_post thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,442 | INFO     | [job] control thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,794 | INFO     | [job] queue monitor thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:04,845 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 00:54:36] 2025-12-02 23:54:08,854 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 00:54:36] 2025-12-02 23:54:24,168 | INFO     | [monitor] cgroup control has ended
[2025-12-03 00:54:36] 2025-12-02 23:54:26,250 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629347907392)>', '<ExcThread(monitor, started 140628771993344)>']
[2025-12-03 00:54:36] 2025-12-02 23:54:31,276 | INFO     | all workflow threads have been joined
[2025-12-03 00:54:36] 2025-12-02 23:54:31,277 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 00:54:36] 2025-12-02 23:54:31,277 | INFO     | traces error code: 0
[2025-12-03 00:54:36] 2025-12-02 23:54:31,277 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 00:54:36] 2025-12-02 23:54:31,502 | INFO     | PID=12589 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-03 00:54:36] 2025-12-02 23:54:31,502 | INFO     | .. there are 9 such processes running
[2025-12-03 00:54:36] 2025-12-02 23:54:31,504 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 00:54:36] 2025-12-02 23:54:31,504 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 00:54:36] 2025-12-02 23:54:31,504 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 00:54:36] 2025-12-02 23:54:31,504 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 00:54:36] 2025-12-02 23:54:31,504 | INFO     | [monitor] control thread has ended
[2025-12-03 00:54:36] 2025-12-02 23:54:31,816 [wrapper] ==== pilot stdout END ====
[2025-12-03 00:54:36] 2025-12-02 23:54:31,923 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 00:54:36] 2025-12-02 23:54:32,007 [wrapper] pilotpid: 12589
[2025-12-03 00:54:36] 2025-12-02 23:54:32,086 [wrapper] Pilot exit status: 0
[2025-12-03 00:54:36] 2025-12-02 23:54:32,405 [wrapper] pandaids: 6896261811
[2025-12-03 00:54:36] 2025-12-02 23:54:33,400 [wrapper] cleanup supervisor_pilot 17283 12590
[2025-12-03 00:54:36] 2025-12-02 23:54:33,499 [wrapper] Test setup, not cleaning
[2025-12-03 00:54:36] 2025-12-02 23:54:33,600 [wrapper] apfmon messages muted
[2025-12-03 00:54:36] 2025-12-02 23:54:33,684 [wrapper] ==== wrapper stdout END ====
[2025-12-03 00:54:36] 2025-12-02 23:54:33,773 [wrapper] ==== wrapper stderr END ====
[2025-12-03 00:54:36]  *** Error codes and diagnostics ***
[2025-12-03 00:54:36]     "exeErrorCode": 0,
[2025-12-03 00:54:36]     "exeErrorDiag": "",
[2025-12-03 00:54:36]     "pilotErrorCode": 0,
[2025-12-03 00:54:36]     "pilotErrorDiag": "",
[2025-12-03 00:54:36]  *** Listing of results directory ***
[2025-12-03 00:54:36] total 1086604
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc      5112 Nov 28 11:28 queuedata.json
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-03 00:54:36] -rwx------. 1 boinc boinc     36292 Nov 28 11:28 runpilot2-wrapper.sh
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc       100 Dec  2 04:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 00:54:36] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 04:16 run_atlas
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc       105 Dec  2 04:16 job.xml
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc 378472117 Dec  2 04:16 EVNT.47531050._000403.pool.root.1
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc     15847 Dec  2 04:16 start_atlas.sh
[2025-12-03 00:54:36] drwxrwx--x. 2 boinc boinc        68 Dec  2 04:16 shared
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc    590123 Dec  2 04:16 input.tar.gz
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc      6391 Dec  2 04:16 init_data.xml
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc         0 Dec  2 04:16 boinc_lockfile
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc      2878 Dec  2 04:16 pandaJob.out
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc    992000 Dec  2 04:17 agis_schedconf.cvmfs.json
[2025-12-03 00:54:36] drwx------. 5 boinc boinc      4096 Dec  2 04:17 pilot3
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc       533 Dec  3 00:38 boinc_task_state.xml
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc 705626268 Dec  3 00:51 HITS.47531058._000196.pool.root.1
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc      1033 Dec  3 00:52 memory_monitor_summary.json
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc   1516240 Dec  3 00:52 agis_ddmendpoints.agis.ALL.json
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc   2424705 Dec  3 00:52 log.47531058._000196.job.log.tgz.1
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc     28005 Dec  3 00:53 heartbeat.json
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc      8192 Dec  3 00:54 boinc_mmap_file
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc        29 Dec  3 00:54 wrapper_checkpoint.txt
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc        95 Dec  3 00:54 pilot_heartbeat.json
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc       820 Dec  3 00:54 pilotlog.txt
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc   9897220 Dec  3 00:54 log.47531058._000196.job.log.1
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc       353 Dec  3 00:54 output.list
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc       620 Dec  3 00:54 runtime_log
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc  12359680 Dec  3 00:54 result.tar.gz
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc       661 Dec  3 00:54 wqIKDmKtAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjROKDmJw5Bom.diag
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc      8817 Dec  3 00:54 runtime_log.err
[2025-12-03 00:54:36] -rw-r--r--. 1 boinc boinc     20780 Dec  3 00:54 stderr.txt
[2025-12-03 00:54:36] HITS file was successfully produced:
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc 705626268 Dec  3 00:51 shared/HITS.pool.root.1
[2025-12-03 00:54:36]  *** Contents of shared directory: ***
[2025-12-03 00:54:36] total 1071364
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc 378472117 Dec  2 04:16 ATLAS.root_0
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc     15847 Dec  2 04:16 start_atlas.sh
[2025-12-03 00:54:36] -rw-r--r--. 2 boinc boinc    590123 Dec  2 04:16 input.tar.gz
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc 705626268 Dec  3 00:51 HITS.pool.root.1
[2025-12-03 00:54:36] -rw-------. 1 boinc boinc  12359680 Dec  3 00:54 result.tar.gz
00:54:37 (8851): run_atlas exited; CPU time 278276.809987
00:54:37 (8851): called boinc_finish(0)

</stderr_txt>
]]>

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