Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:20:04 (895618): wrapper (7.7.26015): starting
14:20:04 (895618): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 14:20:04] Arguments: --nthreads 4
[2025-12-02 14:20:04] Threads: 4
[2025-12-02 14:20:04] Checking for CVMFS
[2025-12-02 14:20:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 14:20:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 14:20:04] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 14:20:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 14:20:04] 2.9.2.0 3044 6193 96780 153550 3 81 31193498 36864000 0 130560 0 2468941 99.983 215278 543 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 14:20:04] CVMFS is ok
[2025-12-02 14:20:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 14:20:04] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 14:20:04] Further information can be found at the LHC@home message board.
[2025-12-02 14:20:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 14:20:04] Checking for apptainer binary...
[2025-12-02 14:20:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 14:20:04] Running /usr/bin/apptainer --version
[2025-12-02 14:20:04] apptainer version 1.4.1-1.1
[2025-12-02 14:20:04] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 14:20:04] cosA131b
[2025-12-02 14:20:04] apptainer works
[2025-12-02 14:20:04] Set ATHENA_PROC_NUMBER=4
[2025-12-02 14:20:04] Set ATHENA_CORE_NUMBER=4
[2025-12-02 14:20:04] Starting ATLAS job with PandaID=6895355090
[2025-12-02 14:20:04] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 21:14:52]  *** The last 200 lines of the pilot log: ***
[2025-12-02 21:14:52] 2025-12-02 20:13:43,237 | INFO     | time since job start (24811s) is within the limit (172800.0s)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,835 | INFO     | monitor loop #1888: job 0:6895355090 is in state 'finished'
[2025-12-02 21:14:52] 2025-12-02 20:13:44,836 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,919 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 21:14:52] 2025-12-02 20:13:44,920 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3290.2172499999997
[2025-12-02 21:14:52] 2025-12-02 20:13:44,922 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6895355090/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,922 | INFO     | extracted standard info from prmon json
[2025-12-02 21:14:52] 2025-12-02 20:13:44,922 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 21:14:52] 2025-12-02 20:13:44,922 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 21:14:52] 2025-12-02 20:13:44,925 | INFO     | fitting pss+swap vs Time
[2025-12-02 21:14:52] 2025-12-02 20:13:44,925 | INFO     | sum of square deviations: 20905426388.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | sum of deviations: 144213643917.00003
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | mean x: 1764694019.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | mean y: 2398315.995085995
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | intersect: -12171137404.11862
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | chi2: 4.789337347306881
[2025-12-02 21:14:52] 2025-12-02 20:13:44,927 | INFO     | sum of square deviations: 20144379560.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | sum of deviations: 221305598521.50003
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | mean x: 1764693866.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | mean y: 2413707.868159204
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | intersect: -19384464461.30535
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | chi2: 2.955109515527355
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | current chi2=2.955109515527355 (change=38.29815481281437 %)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,929 | INFO     | sum of square deviations: 19402030758.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | sum of deviations: 215778977507.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | mean x: 1764693714.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | mean y: 2412572.2720403024
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | intersect: -19623564211.7789
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | chi2: 2.9556135473183307
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | current chi2=2.9556135473183307 (change=-0.017056281275787667 %)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | right removable region: 396
[2025-12-02 21:14:52] 2025-12-02 20:13:44,931 | INFO     | sum of square deviations: 20144379560.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | sum of deviations: 45303061784.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | mean x: 1764694171.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | mean y: 2418107.8258706466
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | intersect: -3966234728.6253934
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | chi2: 2.4350638749301767
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | current chi2=2.4350638749301767 (change=49.15655970027981 %)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,933 | INFO     | sum of square deviations: 19402030758.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | sum of deviations: 6975454554.000038
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | mean x: 1764694324.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | mean y: 2425944.6221662466
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | intersect: -632020274.5545686
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | chi2: 1.9525204043568747
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | current chi2=1.9525204043568747 (change=19.816460485544287 %)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | left removable region: 20
[2025-12-02 21:14:52] 2025-12-02 20:13:44,935 | INFO     | sum of square deviations: 16483099750.0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,936 | INFO     | sum of deviations: 58517975788.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,936 | INFO     | mean x: 1764694293.5
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | mean y: 2445812.8271276597
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | intersect: -6262537079.188503
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | chi2: 0.060703703514243215
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | current memory leak: 3.55 B/s (using 376 data points, chi2=0.06)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | could have reported an average CPU frequency of 3782 MHz (17 samples)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | ..............................
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . Timing measurements:
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . get job = 0 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . initial setup = 1 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . payload setup = 4 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . stage-in = 0 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . payload execution = 24779 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . stage-out = 1 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | . log creation = 0 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,937 | INFO     | ..............................
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | 
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | job summary report
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | --------------------------------------------------
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | PanDA job id: 6895355090
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | task id: 47556137
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | errors: (none)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 21:14:52] 2025-12-02 20:13:44,977 | INFO     | pilot state: finished 
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | transexitcode: 0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | exeerrorcode: 0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | exeerrordiag: 
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | exitcode: 0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | exitmsg: OK
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | cpuconsumptiontime: 97051 s
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | nevents: 1000
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | neventsw: 0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | pid: 905991
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | pgrp: 905991
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | corecount: 4
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | event service: False
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | sizes: {0: 2284317, 3: 2284579, 10: 2284607, 24787: 2321557, 24788: 2330557, 24791: 2330613, 24798: 2331051}
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | --------------------------------------------------
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | 
[2025-12-02 21:14:52] 2025-12-02 20:13:44,978 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,997 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | job 6895355090 has completed (purged errors)
[2025-12-02 21:14:52] 2025-12-02 20:13:44,998 | INFO     | overall cleanup function is called
[2025-12-02 21:14:52] 2025-12-02 20:13:46,007 | INFO     | --- collectZombieJob: --- 10, [905991]
[2025-12-02 21:14:52] 2025-12-02 20:13:46,008 | INFO     | zombie collector waiting for pid 905991
[2025-12-02 21:14:52] 2025-12-02 20:13:46,008 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 21:14:52] 2025-12-02 20:13:46,008 | INFO     | collected zombie processes
[2025-12-02 21:14:52] 2025-12-02 20:13:46,008 | INFO     | will attempt to kill all subprocesses of pid=905991
[2025-12-02 21:14:52] 2025-12-02 20:13:46,052 | INFO     | process IDs to be killed: [905991] (in reverse order)
[2025-12-02 21:14:52] 2025-12-02 20:13:46,087 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 21:14:52] 2025-12-02 20:13:46,087 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 21:14:52] 2025-12-02 20:13:46,089 | INFO     | did not find any defunct processes belonging to 905991
[2025-12-02 21:14:52] 2025-12-02 20:13:46,090 | INFO     | did not find any defunct processes belonging to 905991
[2025-12-02 21:14:52] 2025-12-02 20:13:46,091 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 21:14:52] 2025-12-02 20:13:46,092 | INFO     | ready for new job
[2025-12-02 21:14:52] 2025-12-02 20:13:46,092 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 21:14:52] 2025-12-02 20:13:46,093 | INFO     | ***************************************
[2025-12-02 21:14:52] 2025-12-02 20:13:46,093 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 21:14:52] 2025-12-02 20:13:46,093 | INFO     | ***************************************
[2025-12-02 21:14:52] 2025-12-02 20:13:46,093 | INFO     | 
[2025-12-02 21:14:52] 2025-12-02 20:13:46,093 | INFO     | architecture information:
[2025-12-02 21:14:52] 2025-12-02 20:13:46,094 | INFO     | executing command: cat /etc/os-release
[2025-12-02 21:14:52] 2025-12-02 20:13:46,109 | INFO     | cat /etc/os-release:
[2025-12-02 21:14:52] NAME="CentOS Linux"
[2025-12-02 21:14:52] VERSION="7 (Core)"
[2025-12-02 21:14:52] ID="centos"
[2025-12-02 21:14:52] ID_LIKE="rhel fedora"
[2025-12-02 21:14:52] VERSION_ID="7"
[2025-12-02 21:14:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 21:14:52] ANSI_COLOR="0;31"
[2025-12-02 21:14:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 21:14:52] HOME_URL="https://www.centos.org/"
[2025-12-02 21:14:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 21:14:52] 
[2025-12-02 21:14:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 21:14:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 21:14:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 21:14:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 21:14:52] 
[2025-12-02 21:14:52] 2025-12-02 20:13:46,109 | INFO     | ***************************************
[2025-12-02 21:14:52] 2025-12-02 20:13:46,612 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 21:14:52] 2025-12-02 20:13:46,630 | INFO     | sufficient remaining disk space (321235451904 B)
[2025-12-02 21:14:52] 2025-12-02 20:13:46,630 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 21:14:52] 2025-12-02 20:13:46,630 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 21:14:52] 2025-12-02 20:13:46,630 | INFO     | update_server=False
[2025-12-02 21:14:52] 2025-12-02 20:13:46,631 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 21:14:52] 2025-12-02 20:13:46,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 21:14:52] 2025-12-02 20:13:46,631 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:14:52] 2025-12-02 20:13:46,631 | INFO     | aborting loop
[2025-12-02 21:14:52] 2025-12-02 20:13:46,631 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:14:52] 2025-12-02 20:13:46,661 | INFO     | all data control threads have been joined
[2025-12-02 21:14:52] 2025-12-02 20:13:47,521 | INFO     | all job control threads have been joined
[2025-12-02 21:14:52] 2025-12-02 20:13:47,636 | INFO     | [job] retrieve thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:47,637 | INFO     | [job] job monitor thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:47,637 | INFO     | [job] queue monitor thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:47,667 | INFO     | [data] control thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:47,728 | INFO     | [payload] validate_post thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:47,972 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,019 | INFO     | all payload control threads have been joined
[2025-12-02 21:14:52] 2025-12-02 20:13:48,022 | INFO     | [job] validate thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,033 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,391 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,512 | INFO     | [payload] failed_post thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,527 | INFO     | [job] control thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,637 | INFO     | [data] copytool_out thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:48,660 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 21:14:52] 2025-12-02 20:13:48,777 | INFO     | [data] copytool_in thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:49,025 | INFO     | [payload] control thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:52,667 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:13:57,064 | INFO     | job.realtimelogging is not enabled
[2025-12-02 21:14:52] 2025-12-02 20:13:58,071 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 21:14:52] 2025-12-02 20:14:16,367 | INFO     | PID=899420 has CPU usage=2.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 21:14:52] 2025-12-02 20:14:16,367 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 21:14:52] 2025-12-02 20:14:16,367 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 21:14:52] 2025-12-02 20:14:16,367 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 21:14:52] 2025-12-02 20:14:46,003 | INFO     | [monitor] cgroup control has ended
[2025-12-02 21:14:52] 2025-12-02 20:14:47,270 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139847344670528)>', '<ExcThread(monitor, started 139846442002176)>']
[2025-12-02 21:14:52] 2025-12-02 20:14:47,533 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 21:14:52] 2025-12-02 20:14:47,533 | INFO     | [monitor] control thread has ended
[2025-12-02 21:14:52] 2025-12-02 20:14:52,296 | INFO     | all workflow threads have been joined
[2025-12-02 21:14:52] 2025-12-02 20:14:52,296 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 21:14:52] 2025-12-02 20:14:52,296 | INFO     | traces error code: 0
[2025-12-02 21:14:52] 2025-12-02 20:14:52,296 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 21:14:52] 2025-12-02 20:14:52,377 [wrapper] ==== pilot stdout END ====
[2025-12-02 21:14:52] 2025-12-02 20:14:52,382 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 21:14:52] 2025-12-02 20:14:52,386 [wrapper] pilotpid: 899420
[2025-12-02 21:14:52] 2025-12-02 20:14:52,390 [wrapper] Pilot exit status: 0
[2025-12-02 21:14:52] 2025-12-02 20:14:52,402 [wrapper] pandaids: 6895355090
[2025-12-02 21:14:52] 2025-12-02 20:14:52,425 [wrapper] cleanup supervisor_pilot  950949 899421
[2025-12-02 21:14:52] 2025-12-02 20:14:52,429 [wrapper] Test setup, not cleaning
[2025-12-02 21:14:52] 2025-12-02 20:14:52,433 [wrapper] apfmon messages muted
[2025-12-02 21:14:52] 2025-12-02 20:14:52,437 [wrapper] ==== wrapper stdout END ====
[2025-12-02 21:14:52] 2025-12-02 20:14:52,441 [wrapper] ==== wrapper stderr END ====
[2025-12-02 21:14:52]  *** Error codes and diagnostics ***
[2025-12-02 21:14:52]     "exeErrorCode": 0,
[2025-12-02 21:14:52]     "exeErrorDiag": "",
[2025-12-02 21:14:52]     "pilotErrorCode": 0,
[2025-12-02 21:14:52]     "pilotErrorDiag": "",
[2025-12-02 21:14:52]  *** Listing of results directory ***
[2025-12-02 21:14:52] total 1316304
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc    576529 Nov 23 06:47 pilot3.tar.gz
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc      5112 Nov 23 06:49 queuedata.json
[2025-12-02 21:14:52] -rwx------ 1 boinc boinc     36292 Nov 23 06:51 runpilot2-wrapper.sh
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc       100 Dec  2 14:20 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 21:14:52] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 14:20 run_atlas
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc       105 Dec  2 14:20 job.xml
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc 410073660 Dec  2 14:20 EVNT.47483658._000642.pool.root.1
[2025-12-02 21:14:52] drwxrwx--x 2 boinc boinc      4096 Dec  2 14:20 shared
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc    590103 Dec  2 14:20 input.tar.gz
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc     15847 Dec  2 14:20 start_atlas.sh
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc         0 Dec  2 14:20 boinc_setup_complete
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc      6380 Dec  2 14:20 init_data.xml
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc         0 Dec  2 14:20 boinc_lockfile
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc      2785 Dec  2 14:20 pandaJob.out
[2025-12-02 21:14:52] -rw------- 1 boinc boinc    986791 Dec  2 14:20 agis_schedconf.cvmfs.json
[2025-12-02 21:14:52] drwx------ 5 boinc boinc      4096 Dec  2 14:20 pilot3
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc       531 Dec  2 21:09 boinc_task_state.xml
[2025-12-02 21:14:52] -rw------- 1 boinc boinc 924408613 Dec  2 21:13 HITS.47556137._006375.pool.root.1
[2025-12-02 21:14:52] -rw------- 1 boinc boinc        95 Dec  2 21:13 pilot_heartbeat.json
[2025-12-02 21:14:52] -rw------- 1 boinc boinc      1029 Dec  2 21:13 memory_monitor_summary.json
[2025-12-02 21:14:52] -rw------- 1 boinc boinc   1516240 Dec  2 21:13 agis_ddmendpoints.agis.ALL.json
[2025-12-02 21:14:52] -rw------- 1 boinc boinc   1256675 Dec  2 21:13 log.47556137._006375.job.log.tgz.1
[2025-12-02 21:14:52] -rw------- 1 boinc boinc      8576 Dec  2 21:13 heartbeat.json
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc      8192 Dec  2 21:14 boinc_mmap_file
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc        28 Dec  2 21:14 wrapper_checkpoint.txt
[2025-12-02 21:14:52] -rw------- 1 boinc boinc      4823 Dec  2 21:14 pilotlog.txt
[2025-12-02 21:14:52] -rw------- 1 boinc boinc   3495802 Dec  2 21:14 log.47556137._006375.job.log.1
[2025-12-02 21:14:52] -rw------- 1 boinc boinc       353 Dec  2 21:14 output.list
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc       620 Dec  2 21:14 runtime_log
[2025-12-02 21:14:52] -rw------- 1 boinc boinc   4771840 Dec  2 21:14 result.tar.gz
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc      8908 Dec  2 21:14 runtime_log.err
[2025-12-02 21:14:52] -rw------- 1 boinc boinc       667 Dec  2 21:14 E8JMDmSBIh8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmESIKDmNSXW4m.diag
[2025-12-02 21:14:52] -rw-r--r-- 1 boinc boinc     21219 Dec  2 21:14 stderr.txt
[2025-12-02 21:14:52] HITS file was successfully produced:
[2025-12-02 21:14:52] -rw------- 1 boinc boinc 924408613 Dec  2 21:13 shared/HITS.pool.root.1
[2025-12-02 21:14:52]  *** Contents of shared directory: ***
[2025-12-02 21:14:52] total 1308472
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc 410073660 Dec  2 14:20 ATLAS.root_0
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc    590103 Dec  2 14:20 input.tar.gz
[2025-12-02 21:14:52] -rw-r--r-- 2 boinc boinc     15847 Dec  2 14:20 start_atlas.sh
[2025-12-02 21:14:52] -rw------- 1 boinc boinc 924408613 Dec  2 21:13 HITS.pool.root.1
[2025-12-02 21:14:52] -rw------- 1 boinc boinc   4771840 Dec  2 21:14 result.tar.gz
21:14:53 (895618): run_atlas exited; CPU time 97026.952924
21:14:53 (895618): called boinc_finish(0)

</stderr_txt>
]]>

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