Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
13:53:28 (3286079): wrapper (7.7.26015): starting
13:53:28 (3286079): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 13:53:28] Arguments: --nthreads 12
[2025-11-30 13:53:28] Threads: 12
[2025-11-30 13:53:28] Checking for CVMFS
[2025-11-30 13:53:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 13:53:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 13:53:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 13:53:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 13:53:29] 2.13.0.0 498242 16542 46672 153482 3 79 74181118 82903040 1302 130560 29 7527118 99.964 736982 312 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-30 13:53:29] CVMFS is ok
[2025-11-30 13:53:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 13:53:29] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-30 13:53:29] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-30 13:53:29] Further information can be found at the LHC@home message board.
[2025-11-30 13:53:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 13:53:29] Checking for apptainer binary...
[2025-11-30 13:53:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 13:53:29] Running /usr/bin/apptainer --version
[2025-11-30 13:53:29] apptainer version 1.4.4
[2025-11-30 13:53:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 13:53:29] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-11-30 13:53:29] apptainer works
[2025-11-30 13:53:29] Set ATHENA_PROC_NUMBER=12
[2025-11-30 13:53:29] Set ATHENA_CORE_NUMBER=12
[2025-11-30 13:53:29] Starting ATLAS job with PandaID=6893874244
[2025-11-30 13:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 17:24:59]  *** The last 200 lines of the pilot log: ***
[2025-11-30 17:24:59] 2025-11-30 17:24:08,862 | INFO     | executing command: lscpu
[2025-11-30 17:24:59] 2025-11-30 17:24:08,878 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-30 17:24:59] 2025-11-30 17:24:09,676 | INFO     | time since job start (12637s) is within the limit (172800.0s)
[2025-11-30 17:24:59] 2025-11-30 17:24:09,999 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 17:24:59] 2025-11-30 17:24:10,000 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3197.8811666666666
[2025-11-30 17:24:59] 2025-11-30 17:24:10,001 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6893874244/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,001 | INFO     | extracted standard info from prmon json
[2025-11-30 17:24:59] 2025-11-30 17:24:10,001 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 17:24:59] 2025-11-30 17:24:10,001 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | fitting pss+swap vs Time
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | sum of square deviations: 2750348128.763293
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | sum of deviations: 104999480267.45895
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | mean x: 1764517111.0772946
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | mean y: 3503694.033816425
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | intersect: -67360106624.439995
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | chi2: 2.50078183364111
[2025-11-30 17:24:59] 2025-11-30 17:24:10,003 | INFO     | sum of square deviations: 2555828431.232684
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | sum of deviations: 133310121417.33165
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | mean x: 1764516958.579208
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | mean y: 3525513.698019802
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | intersect: -92032374516.44751
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | chi2: 1.524730877046258
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | current chi2=1.524730877046258 (change=39.02983232942527 %)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | sum of square deviations: 2370704258.7004995
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | sum of deviations: 127495335731.5888
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | mean x: 1764516806.0812182
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | mean y: 3520725.2131979694
[2025-11-30 17:24:59] 2025-11-30 17:24:10,004 | INFO     | intersect: -94891345123.07765
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | chi2: 1.5229992019757488
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | current chi2=1.5229992019757488 (change=0.11357250624214002 %)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | right removable region: 196
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | sum of square deviations: 2555818671.232684
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | sum of deviations: 57005581899.920784
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | mean x: 1764517263.579208
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | mean y: 3540946.504950495
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | intersect: -39352667893.72348
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | chi2: 1.0194347124288337
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | current chi2=1.0194347124288337 (change=59.23535996962405 %)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,005 | INFO     | sum of square deviations: 2370684738.7004995
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | sum of deviations: 47888311209.11172
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | mean x: 1764517416.0812182
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | mean y: 3548437.8680203045
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | intersect: -35640060252.8067
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | chi2: 1.0106049328692335
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | current chi2=1.0106049328692335 (change=0.866144683121783 %)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | left removable region: 20
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | sum of square deviations: 1690494356.5454543
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | sum of deviations: 61284812543.22731
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | mean x: 1764517385.590909
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | mean y: 3577788.5170454546
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | intersect: -63964761878.81315
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | chi2: 0.015613084754427685
[2025-11-30 17:24:59] 2025-11-30 17:24:10,006 | INFO     | current memory leak: 36.25 B/s (using 176 data points, chi2=0.02)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | could have reported an average CPU frequency of 3486 MHz (10 samples)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | ..............................
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . Timing measurements:
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . get job = 0 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . initial setup = 1 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . payload setup = 1 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . stage-in = 0 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . payload execution = 12614 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . stage-out = 1 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | . log creation = 0 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,007 | INFO     | ..............................
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | 
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | job summary report
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | --------------------------------------------------
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | PanDA job id: 6893874244
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | task id: 47523449
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | errors: (none)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | pilot state: finished 
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | transexitcode: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | exeerrorcode: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | exeerrordiag: 
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | exitcode: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | exitmsg: OK
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | cpuconsumptiontime: 124668 s
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | nevents: 1000
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | neventsw: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | pid: 3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | pgrp: 3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | corecount: 12
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | event service: False
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | sizes: {0: 2283486, 1: 2284349, 2: 2284611, 11: 2284639, 12619: 2315792, 12620: 2315791, 12621: 2324983, 12622: 2325039, 12626: 2325285}
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | --------------------------------------------------
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | 
[2025-11-30 17:24:59] 2025-11-30 17:24:10,173 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,180 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | job 6893874244 has completed (purged errors)
[2025-11-30 17:24:59] 2025-11-30 17:24:10,181 | INFO     | overall cleanup function is called
[2025-11-30 17:24:59] 2025-11-30 17:24:11,198 | INFO     | --- collectZombieJob: --- 10, [3296411]
[2025-11-30 17:24:59] 2025-11-30 17:24:11,199 | INFO     | zombie collector waiting for pid 3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:11,199 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 17:24:59] 2025-11-30 17:24:11,199 | INFO     | collected zombie processes
[2025-11-30 17:24:59] 2025-11-30 17:24:11,199 | INFO     | will attempt to kill all subprocesses of pid=3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:11,227 | INFO     | process IDs to be killed: [3296411] (in reverse order)
[2025-11-30 17:24:59] 2025-11-30 17:24:11,242 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 17:24:59] 2025-11-30 17:24:11,250 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 17:24:59] 2025-11-30 17:24:11,251 | INFO     | did not find any defunct processes belonging to 3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:11,252 | INFO     | did not find any defunct processes belonging to 3296411
[2025-11-30 17:24:59] 2025-11-30 17:24:11,253 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 17:24:59] 2025-11-30 17:24:11,253 | INFO     | ready for new job
[2025-11-30 17:24:59] 2025-11-30 17:24:11,253 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | ***************************************
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | ***************************************
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | 
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | architecture information:
[2025-11-30 17:24:59] 2025-11-30 17:24:11,254 | INFO     | executing command: cat /etc/os-release
[2025-11-30 17:24:59] 2025-11-30 17:24:11,258 | INFO     | cat /etc/os-release:
[2025-11-30 17:24:59] NAME="CentOS Linux"
[2025-11-30 17:24:59] VERSION="7 (Core)"
[2025-11-30 17:24:59] ID="centos"
[2025-11-30 17:24:59] ID_LIKE="rhel fedora"
[2025-11-30 17:24:59] VERSION_ID="7"
[2025-11-30 17:24:59] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 17:24:59] ANSI_COLOR="0;31"
[2025-11-30 17:24:59] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 17:24:59] HOME_URL="https://www.centos.org/"
[2025-11-30 17:24:59] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 17:24:59] 
[2025-11-30 17:24:59] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 17:24:59] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 17:24:59] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 17:24:59] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 17:24:59] 
[2025-11-30 17:24:59] 2025-11-30 17:24:11,258 | INFO     | ***************************************
[2025-11-30 17:24:59] 2025-11-30 17:24:11,761 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-30 17:24:59] 2025-11-30 17:24:11,766 | INFO     | sufficient remaining disk space (341675343872 B)
[2025-11-30 17:24:59] 2025-11-30 17:24:11,766 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 17:24:59] 2025-11-30 17:24:11,767 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 17:24:59] 2025-11-30 17:24:11,767 | INFO     | update_server=False
[2025-11-30 17:24:59] 2025-11-30 17:24:11,767 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 17:24:59] 2025-11-30 17:24:11,767 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 17:24:59] 2025-11-30 17:24:11,767 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:24:59] 2025-11-30 17:24:11,853 | INFO     | all data control threads have been joined
[2025-11-30 17:24:59] 2025-11-30 17:24:11,881 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 17:24:59] 2025-11-30 17:24:11,882 | INFO     | aborting loop
[2025-11-30 17:24:59] 2025-11-30 17:24:12,160 | INFO     | all payload control threads have been joined
[2025-11-30 17:24:59] 2025-11-30 17:24:12,259 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 17:24:59] 2025-11-30 17:24:12,660 | INFO     | all job control threads have been joined
[2025-11-30 17:24:59] 2025-11-30 17:24:12,767 | INFO     | [job] retrieve thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:12,771 | INFO     | [job] queue monitor thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:12,858 | INFO     | [data] control thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:12,887 | INFO     | [job] job monitor thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:12,903 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,078 | INFO     | [payload] validate_post thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,165 | INFO     | [payload] control thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,645 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,665 | INFO     | [job] control thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,772 | INFO     | [data] copytool_out thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:13,991 | INFO     | [data] copytool_in thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:14,003 | INFO     | [payload] failed_post thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:14,051 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:14,089 | INFO     | [job] validate thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:16,264 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:21,951 | INFO     | job.realtimelogging is not enabled
[2025-11-30 17:24:59] 2025-11-30 17:24:22,956 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 17:24:59] 2025-11-30 17:24:42,744 | INFO     | PID=3289822 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 17:24:59] 2025-11-30 17:24:42,745 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 17:24:59] 2025-11-30 17:24:42,745 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 17:24:59] 2025-11-30 17:24:42,745 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 17:24:59] 2025-11-30 17:24:53,473 | INFO     | [monitor] cgroup control has ended
[2025-11-30 17:24:59] 2025-11-30 17:24:54,486 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139426515863360)>', '<ExcThread(monitor, started 139425468098304)>']
[2025-11-30 17:24:59] 2025-11-30 17:24:54,804 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 17:24:59] 2025-11-30 17:24:54,804 | INFO     | [monitor] control thread has ended
[2025-11-30 17:24:59] 2025-11-30 17:24:59,519 | INFO     | all workflow threads have been joined
[2025-11-30 17:24:59] 2025-11-30 17:24:59,519 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 17:24:59] 2025-11-30 17:24:59,528 | INFO     | traces error code: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:59,528 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 17:24:59] 2025-11-30 17:24:59,579 [wrapper] ==== pilot stdout END ====
[2025-11-30 17:24:59] 2025-11-30 17:24:59,580 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 17:24:59] 2025-11-30 17:24:59,581 [wrapper] pilotpid: 3289822
[2025-11-30 17:24:59] 2025-11-30 17:24:59,582 [wrapper] Pilot exit status: 0
[2025-11-30 17:24:59] 2025-11-30 17:24:59,585 [wrapper] pandaids: 6893874244
[2025-11-30 17:24:59] 2025-11-30 17:24:59,595 [wrapper] cleanup supervisor_pilot 3384685 3289823
[2025-11-30 17:24:59] 2025-11-30 17:24:59,596 [wrapper] Test setup, not cleaning
[2025-11-30 17:24:59] 2025-11-30 17:24:59,597 [wrapper] apfmon messages muted
[2025-11-30 17:24:59] 2025-11-30 17:24:59,598 [wrapper] ==== wrapper stdout END ====
[2025-11-30 17:24:59] 2025-11-30 17:24:59,598 [wrapper] ==== wrapper stderr END ====
[2025-11-30 17:24:59]  *** Error codes and diagnostics ***
[2025-11-30 17:24:59]     "exeErrorCode": 0,
[2025-11-30 17:24:59]     "exeErrorDiag": "",
[2025-11-30 17:24:59]     "pilotErrorCode": 0,
[2025-11-30 17:24:59]     "pilotErrorDiag": "",
[2025-11-30 17:24:59]  *** Listing of results directory ***
[2025-11-30 17:24:59] total 1305976
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc    576529 Nov 20 15:07 pilot3.tar.gz
[2025-11-30 17:24:59] -rwx------ 1 boinc boinc     36292 Nov 20 15:45 runpilot2-wrapper.sh
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc      5112 Nov 20 15:45 queuedata.json
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc       100 Nov 30 13:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 17:24:59] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 13:53 run_atlas
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc       105 Nov 30 13:53 job.xml
[2025-11-30 17:24:59] drwxrwx--x 2 boinc boinc      4096 Nov 30 13:53 shared
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc    590094 Nov 30 13:53 input.tar.gz
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc      9907 Nov 30 13:53 init_data.xml
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc 410014108 Nov 30 13:53 EVNT.47493127._000708.pool.root.1
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:53 start_atlas.sh
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc         0 Nov 30 13:53 boinc_lockfile
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc      2785 Nov 30 13:53 pandaJob.out
[2025-11-30 17:24:59] -rw------- 1 boinc boinc    991791 Nov 30 13:53 agis_schedconf.cvmfs.json
[2025-11-30 17:24:59] drwx------ 5 boinc boinc      4096 Nov 30 13:53 pilot3
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc       532 Nov 30 17:20 boinc_task_state.xml
[2025-11-30 17:24:59] -rw------- 1 boinc boinc 915864603 Nov 30 17:23 HITS.47523449._007072.pool.root.1
[2025-11-30 17:24:59] -rw------- 1 boinc boinc      1081 Nov 30 17:24 memory_monitor_summary.json
[2025-11-30 17:24:59] -rw------- 1 boinc boinc   1516240 Nov 30 17:24 agis_ddmendpoints.agis.ALL.json
[2025-11-30 17:24:59] -rw------- 1 boinc boinc   1945112 Nov 30 17:24 log.47523449._007072.job.log.tgz.1
[2025-11-30 17:24:59] -rw------- 1 boinc boinc      8632 Nov 30 17:24 heartbeat.json
[2025-11-30 17:24:59] -rw------- 1 boinc boinc        95 Nov 30 17:24 pilot_heartbeat.json
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc      8192 Nov 30 17:24 boinc_mmap_file
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc        29 Nov 30 17:24 wrapper_checkpoint.txt
[2025-11-30 17:24:59] -rw------- 1 boinc boinc      4828 Nov 30 17:24 pilotlog.txt
[2025-11-30 17:24:59] -rw------- 1 boinc boinc   1812993 Nov 30 17:24 log.47523449._007072.job.log.1
[2025-11-30 17:24:59] -rw------- 1 boinc boinc       353 Nov 30 17:24 output.list
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc       620 Nov 30 17:24 runtime_log
[2025-11-30 17:24:59] -rw------- 1 boinc boinc   3778560 Nov 30 17:24 result.tar.gz
[2025-11-30 17:24:59] -rw------- 1 boinc boinc       661 Nov 30 17:24 se3NDmx1Lg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmzFIKDmyvihPm.diag
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc      9048 Nov 30 17:24 runtime_log.err
[2025-11-30 17:24:59] -rw-r--r-- 1 boinc boinc     21628 Nov 30 17:24 stderr.txt
[2025-11-30 17:24:59] HITS file was successfully produced:
[2025-11-30 17:24:59] -rw------- 1 boinc boinc 915864603 Nov 30 17:23 shared/HITS.pool.root.1
[2025-11-30 17:24:59]  *** Contents of shared directory: ***
[2025-11-30 17:24:59] total 1299104
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc    590094 Nov 30 13:53 input.tar.gz
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc 410014108 Nov 30 13:53 ATLAS.root_0
[2025-11-30 17:24:59] -rw-r--r-- 2 boinc boinc     15847 Nov 30 13:53 start_atlas.sh
[2025-11-30 17:24:59] -rw------- 1 boinc boinc 915864603 Nov 30 17:23 HITS.pool.root.1
[2025-11-30 17:24:59] -rw------- 1 boinc boinc   3778560 Nov 30 17:24 result.tar.gz
17:25:01 (3286079): run_atlas exited; CPU time 124286.046904
17:25:01 (3286079): called boinc_finish(0)

</stderr_txt>
]]>

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