Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:48:07 (1712): wrapper (7.7.26015): starting
02:48:07 (1712): wrapper: running run_atlas (--nthreads 8)
[2025-12-02 02:48:07] Arguments: --nthreads 8
[2025-12-02 02:48:07] Threads: 8
[2025-12-02 02:48:07] Checking for CVMFS
[2025-12-02 02:48:08] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 02:48:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 02:48:08] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 02:48:10] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 02:48:10] 2.11.2.0 1038 180175 134936 153539 1 85 14528431 25165825 2554 130560 10 59683745 99.887 29991226 2195 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-02 02:48:10] CVMFS is ok
[2025-12-02 02:48:10] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 02:48:10] Checking for apptainer binary...
[2025-12-02 02:48:10] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 02:48:10] Running /usr/bin/apptainer --version
[2025-12-02 02:48:10] apptainer version 1.3.2-1.el7
[2025-12-02 02:48:10] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 02:48:36] cg-vwn304.simple-grid.lan
[2025-12-02 02:48:36] apptainer works
[2025-12-02 02:48:36] Set ATHENA_PROC_NUMBER=8
[2025-12-02 02:48:36] Set ATHENA_CORE_NUMBER=8
[2025-12-02 02:48:36] Starting ATLAS job with PandaID=6901020486
[2025-12-02 02:48:36] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 02:36:05]  *** The last 200 lines of the pilot log: ***
[2025-12-03 02:36:05] 2025-12-03 01:35:25,568 | INFO     | monitor loop #5755: job 0:6901020486 is in state 'finished'
[2025-12-03 02:36:05] 2025-12-03 01:35:25,568 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 02:36:05] 2025-12-03 01:35:26,934 | INFO     | time since job start (85381s) is within the limit (172800.0s)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,038 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 02:36:05] 2025-12-03 01:35:28,039 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-12-03 02:36:05] 2025-12-03 01:35:28,041 | INFO     | using path: /var/lib/boinc/slots/9/PanDA_Pilot-6901020486/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,041 | INFO     | extracted standard info from prmon json
[2025-12-03 02:36:05] 2025-12-03 01:35:28,041 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 02:36:05] 2025-12-03 01:35:28,041 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 02:36:05] 2025-12-03 01:35:28,087 | INFO     | fitting pss+swap vs Time
[2025-12-03 02:36:05] 2025-12-03 01:35:28,089 | INFO     | sum of square deviations: 832762471092.1495
[2025-12-03 02:36:05] 2025-12-03 01:35:28,107 | INFO     | monitor loop #5756: job 0:6901020486 is in state 'finished'
[2025-12-03 02:36:05] 2025-12-03 01:35:28,107 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,214 | INFO     | sum of deviations: 2976666424622.546
[2025-12-03 02:36:05] 2025-12-03 01:35:28,215 | INFO     | mean x: 1764683219.6179857
[2025-12-03 02:36:05] 2025-12-03 01:35:28,215 | INFO     | mean y: 2857673.786330935
[2025-12-03 02:36:05] 2025-12-03 01:35:28,215 | INFO     | intersect: -6304911314.701641
[2025-12-03 02:36:05] 2025-12-03 01:35:28,217 | INFO     | chi2: 15.950588434901084
[2025-12-03 02:36:05] 2025-12-03 01:35:28,219 | INFO     | sum of square deviations: 823808553908.379
[2025-12-03 02:36:05] 2025-12-03 01:35:28,322 | INFO     | sum of deviations: 3443347362471.064
[2025-12-03 02:36:05] 2025-12-03 01:35:28,322 | INFO     | mean x: 1764683067.1220217
[2025-12-03 02:36:05] 2025-12-03 01:35:28,322 | INFO     | mean y: 2865621.319133574
[2025-12-03 02:36:05] 2025-12-03 01:35:28,322 | INFO     | intersect: -7373140315.914382
[2025-12-03 02:36:05] 2025-12-03 01:35:28,324 | INFO     | chi2: 12.701496623101267
[2025-12-03 02:36:05] 2025-12-03 01:35:28,324 | INFO     | current chi2=12.701496623101267 (change=20.369730089020166 %)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,324 | INFO     | right removable region: 1384
[2025-12-03 02:36:05] 2025-12-03 01:35:28,326 | INFO     | sum of square deviations: 823807605968.3789
[2025-12-03 02:36:05] 2025-12-03 01:35:28,335 | INFO     | PID=5512 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-03 02:36:05] 2025-12-03 01:35:28,336 | INFO     | .. there are 9 such processes running
[2025-12-03 02:36:05] 2025-12-03 01:35:28,395 | INFO     | sum of deviations: 2424224916853.1045
[2025-12-03 02:36:05] 2025-12-03 01:35:28,396 | INFO     | mean x: 1764683372.1220217
[2025-12-03 02:36:05] 2025-12-03 01:35:28,396 | INFO     | mean y: 2867080.176895307
[2025-12-03 02:36:05] 2025-12-03 01:35:28,396 | INFO     | intersect: -5190080120.190141
[2025-12-03 02:36:05] 2025-12-03 01:35:28,398 | INFO     | chi2: 11.822594686429815
[2025-12-03 02:36:05] 2025-12-03 01:35:28,398 | INFO     | current chi2=11.822594686429815 (change=25.879883775565983 %)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,400 | INFO     | sum of square deviations: 814917244899.3129
[2025-12-03 02:36:05] 2025-12-03 01:35:28,463 | INFO     | sum of deviations: 2105771192687.877
[2025-12-03 02:36:05] 2025-12-03 01:35:28,463 | INFO     | mean x: 1764683524.6253624
[2025-12-03 02:36:05] 2025-12-03 01:35:28,463 | INFO     | mean y: 2872538.494927536
[2025-12-03 02:36:05] 2025-12-03 01:35:28,463 | INFO     | intersect: -4557123895.040025
[2025-12-03 02:36:05] 2025-12-03 01:35:28,465 | INFO     | chi2: 10.359037809641709
[2025-12-03 02:36:05] 2025-12-03 01:35:28,465 | INFO     | current chi2=10.359037809641709 (change=12.37932040813344 %)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,465 | INFO     | left removable region: 20
[2025-12-03 02:36:05] 2025-12-03 01:35:28,468 | INFO     | sum of square deviations: 786900071831.7717
[2025-12-03 02:36:05] 2025-12-03 01:35:28,524 | INFO     | sum of deviations: 2510660690135.2456
[2025-12-03 02:36:05] 2025-12-03 01:35:28,525 | INFO     | mean x: 1764683646.6304986
[2025-12-03 02:36:05] 2025-12-03 01:35:28,525 | INFO     | mean y: 2885168.7346041054
[2025-12-03 02:36:05] 2025-12-03 01:35:28,525 | INFO     | intersect: -5627463614.696303
[2025-12-03 02:36:05] 2025-12-03 01:35:28,527 | INFO     | chi2: 6.264395171137307
[2025-12-03 02:36:05] 2025-12-03 01:35:28,527 | INFO     | current memory leak: 3.19 B/s (using 1364 data points, chi2=6.26)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,528 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,528 | INFO     | ..............................
[2025-12-03 02:36:05] 2025-12-03 01:35:28,528 | INFO     | . Timing measurements:
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . get job = 0 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . initial setup = 5 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . payload setup = 162 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . stage-in = 0 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . payload execution = 84926 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . stage-out = 6 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | . log creation = 2 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,529 | INFO     | ..............................
[2025-12-03 02:36:05] 2025-12-03 01:35:28,664 | INFO     | 
[2025-12-03 02:36:05] 2025-12-03 01:35:28,664 | INFO     | job summary report
[2025-12-03 02:36:05] 2025-12-03 01:35:28,664 | INFO     | --------------------------------------------------
[2025-12-03 02:36:05] 2025-12-03 01:35:28,664 | INFO     | PanDA job id: 6901020486
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | task id: 47556185
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | errors: (none)
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | pilot state: finished 
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | transexitcode: 0
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | exeerrorcode: 0
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | exeerrordiag: 
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | exitcode: 0
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | exitmsg: OK
[2025-12-03 02:36:05] 2025-12-03 01:35:28,665 | INFO     | cpuconsumptiontime: 320320 s
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | nevents: 1000
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | neventsw: 0
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | pid: 12102
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | pgrp: 12102
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | corecount: 8
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | event service: False
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | sizes: {0: 2284145, 1: 2284344, 12: 2284344, 22: 2284372, 33: 2284400, 44: 2284456, 55: 2284612, 65: 2284640, 76: 2284668, 87: 2284724, 97: 2285014, 98: 2285322, 8
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | --------------------------------------------------
[2025-12-03 02:36:05] 2025-12-03 01:35:28,666 | INFO     | 
[2025-12-03 02:36:05] 2025-12-03 01:35:28,667 | INFO     | executing command: ls -lF /var/lib/boinc/slots/9
[2025-12-03 02:36:05] 2025-12-03 01:35:29,337 | INFO     | time since job start (85384s) is within the limit (172800.0s)
[2025-12-03 02:36:05] 2025-12-03 01:35:29,385 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,385 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,385 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,386 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | job 6901020486 has completed (purged errors)
[2025-12-03 02:36:05] 2025-12-03 01:35:29,387 | INFO     | overall cleanup function is called
[2025-12-03 02:36:05] 2025-12-03 01:35:30,414 | INFO     | --- collectZombieJob: --- 10, [12102]
[2025-12-03 02:36:05] 2025-12-03 01:35:30,414 | INFO     | zombie collector waiting for pid 12102
[2025-12-03 02:36:05] 2025-12-03 01:35:30,414 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 02:36:05] 2025-12-03 01:35:30,414 | INFO     | collected zombie processes
[2025-12-03 02:36:05] 2025-12-03 01:35:30,414 | INFO     | will attempt to kill all subprocesses of pid=12102
[2025-12-03 02:36:05] 2025-12-03 01:35:30,532 | INFO     | process IDs to be killed: [12102] (in reverse order)
[2025-12-03 02:36:05] 2025-12-03 01:35:30,939 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 02:36:05] 2025-12-03 01:35:30,939 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 02:36:05] 2025-12-03 01:35:30,943 | INFO     | did not find any defunct processes belonging to 12102
[2025-12-03 02:36:05] 2025-12-03 01:35:30,945 | INFO     | did not find any defunct processes belonging to 12102
[2025-12-03 02:36:05] 2025-12-03 01:35:30,991 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 02:36:05] 2025-12-03 01:35:30,991 | INFO     | ready for new job
[2025-12-03 02:36:05] 2025-12-03 01:35:30,991 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 02:36:05] 2025-12-03 01:35:30,997 | INFO     | ***************************************
[2025-12-03 02:36:05] 2025-12-03 01:35:30,997 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 02:36:05] 2025-12-03 01:35:30,997 | INFO     | ***************************************
[2025-12-03 02:36:05] 2025-12-03 01:35:30,997 | INFO     | 
[2025-12-03 02:36:05] 2025-12-03 01:35:30,998 | INFO     | pilot is running in a VM
[2025-12-03 02:36:05] 2025-12-03 01:35:30,998 | INFO     | architecture information:
[2025-12-03 02:36:05] 2025-12-03 01:35:31,009 | INFO     | executing command: cat /etc/os-release
[2025-12-03 02:36:05] 2025-12-03 01:35:31,228 | INFO     | cat /etc/os-release:
[2025-12-03 02:36:05] NAME="CentOS Linux"
[2025-12-03 02:36:05] VERSION="7 (Core)"
[2025-12-03 02:36:05] ID="centos"
[2025-12-03 02:36:05] ID_LIKE="rhel fedora"
[2025-12-03 02:36:05] VERSION_ID="7"
[2025-12-03 02:36:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 02:36:05] ANSI_COLOR="0;31"
[2025-12-03 02:36:05] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 02:36:05] HOME_URL="https://www.centos.org/"
[2025-12-03 02:36:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 02:36:05] 
[2025-12-03 02:36:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 02:36:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 02:36:05] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 02:36:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 02:36:05] 
[2025-12-03 02:36:05] 2025-12-03 01:35:31,229 | INFO     | ***************************************
[2025-12-03 02:36:05] 2025-12-03 01:35:31,732 | INFO     | executing command: df -mP /var/lib/boinc/slots/9
[2025-12-03 02:36:05] 2025-12-03 01:35:32,041 | INFO     | sufficient remaining disk space (490710499328 B)
[2025-12-03 02:36:05] 2025-12-03 01:35:32,042 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 02:36:05] 2025-12-03 01:35:32,042 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 02:36:05] 2025-12-03 01:35:32,042 | INFO     | update_server=False
[2025-12-03 02:36:05] 2025-12-03 01:35:32,042 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 02:36:05] 2025-12-03 01:35:32,042 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 02:36:05] 2025-12-03 01:35:32,044 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:36:05] 2025-12-03 01:35:32,044 | INFO     | aborting loop
[2025-12-03 02:36:05] 2025-12-03 01:35:32,389 | INFO     | all payload control threads have been joined
[2025-12-03 02:36:05] 2025-12-03 01:35:32,946 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 02:36:05] 2025-12-03 01:35:33,048 | INFO     | all data control threads have been joined
[2025-12-03 02:36:05] 2025-12-03 01:35:33,050 | INFO     | [job] job monitor thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:33,051 | INFO     | [job] retrieve thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:33,190 | INFO     | all job control threads have been joined
[2025-12-03 02:36:05] 2025-12-03 01:35:33,395 | INFO     | [payload] control thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:33,501 | INFO     | [data] copytool_in thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:33,679 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 02:36:05] 2025-12-03 01:35:33,695 | INFO     | [payload] validate_post thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:33,795 | INFO     | [job] validate thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,054 | INFO     | [data] control thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,095 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,151 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,196 | INFO     | [job] control thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,233 | INFO     | [payload] failed_post thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,475 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,685 | INFO     | [job] queue monitor thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:34,953 | INFO     | [data] copytool_out thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:36,053 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:42,220 | INFO     | job.realtimelogging is not enabled
[2025-12-03 02:36:05] 2025-12-03 01:35:43,226 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 02:36:05] 2025-12-03 01:35:54,506 | INFO     | [monitor] cgroup control has ended
[2025-12-03 02:36:05] 2025-12-03 01:35:55,642 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757371176768)>', '<ExcThread(monitor, started 139756927170304)>']
[2025-12-03 02:36:05] 2025-12-03 01:36:00,668 | INFO     | all workflow threads have been joined
[2025-12-03 02:36:05] 2025-12-03 01:36:00,668 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 02:36:05] 2025-12-03 01:36:00,668 | INFO     | traces error code: 0
[2025-12-03 02:36:05] 2025-12-03 01:36:00,668 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 02:36:05] 2025-12-03 01:36:02,488 | INFO     | PID=5512 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-03 02:36:05] 2025-12-03 01:36:02,489 | INFO     | .. there are 9 such processes running
[2025-12-03 02:36:05] 2025-12-03 01:36:02,490 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 02:36:05] 2025-12-03 01:36:02,490 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 02:36:05] 2025-12-03 01:36:02,490 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 02:36:05] 2025-12-03 01:36:02,490 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 02:36:05] 2025-12-03 01:36:02,491 | INFO     | [monitor] control thread has ended
[2025-12-03 02:36:05] 2025-12-03 01:36:02,716 [wrapper] ==== pilot stdout END ====
[2025-12-03 02:36:05] 2025-12-03 01:36:02,736 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 02:36:05] 2025-12-03 01:36:02,764 [wrapper] pilotpid: 5512
[2025-12-03 02:36:05] 2025-12-03 01:36:02,785 [wrapper] Pilot exit status: 0
[2025-12-03 02:36:05] 2025-12-03 01:36:03,091 [wrapper] pandaids: 6901020486
[2025-12-03 02:36:05] 2025-12-03 01:36:03,707 [wrapper] cleanup supervisor_pilot 13555 5513
[2025-12-03 02:36:05] 2025-12-03 01:36:03,772 [wrapper] Test setup, not cleaning
[2025-12-03 02:36:05] 2025-12-03 01:36:03,844 [wrapper] apfmon messages muted
[2025-12-03 02:36:05] 2025-12-03 01:36:03,926 [wrapper] ==== wrapper stdout END ====
[2025-12-03 02:36:05] 2025-12-03 01:36:04,030 [wrapper] ==== wrapper stderr END ====
[2025-12-03 02:36:05]  *** Error codes and diagnostics ***
[2025-12-03 02:36:05]     "exeErrorCode": 0,
[2025-12-03 02:36:05]     "exeErrorDiag": "",
[2025-12-03 02:36:05]     "pilotErrorCode": 0,
[2025-12-03 02:36:05]     "pilotErrorDiag": "",
[2025-12-03 02:36:05]  *** Listing of results directory ***
[2025-12-03 02:36:05] total 1335708
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc    576529 Nov 28 01:58 pilot3.tar.gz
[2025-12-03 02:36:05] -rwx------. 1 boinc boinc     36292 Nov 28 02:00 runpilot2-wrapper.sh
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc      5112 Nov 28 02:04 queuedata.json
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc       100 Dec  2 02:48 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 02:36:05] -rwxr-xr-x. 1 boinc boinc      7986 Dec  2 02:48 run_atlas
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc       105 Dec  2 02:48 job.xml
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc      6391 Dec  2 02:48 init_data.xml
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc 409409063 Dec  2 02:48 EVNT.47483658._004532.pool.root.1
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc     15847 Dec  2 02:48 start_atlas.sh
[2025-12-03 02:36:05] drwxrwx--x. 2 boinc boinc        68 Dec  2 02:48 shared
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc    590108 Dec  2 02:48 input.tar.gz
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc         0 Dec  2 02:48 boinc_lockfile
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc      2787 Dec  2 02:48 pandaJob.out
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc    992016 Dec  2 02:52 agis_schedconf.cvmfs.json
[2025-12-03 02:36:05] drwx------. 5 boinc boinc      4096 Dec  2 02:52 pilot3
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc       533 Dec  3 02:15 boinc_task_state.xml
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc 926824744 Dec  3 02:32 HITS.47556185._002954.pool.root.1
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc      1033 Dec  3 02:33 memory_monitor_summary.json
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc   1516240 Dec  3 02:33 agis_ddmendpoints.agis.ALL.json
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc   2466806 Dec  3 02:33 log.47556185._002954.job.log.tgz.1
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc      8635 Dec  3 02:35 heartbeat.json
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc      8192 Dec  3 02:35 boinc_mmap_file
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc        29 Dec  3 02:35 wrapper_checkpoint.txt
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc        95 Dec  3 02:36 pilot_heartbeat.json
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc       819 Dec  3 02:36 pilotlog.txt
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc  11345343 Dec  3 02:36 log.47556185._002954.job.log.1
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc       353 Dec  3 02:36 output.list
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc       620 Dec  3 02:36 runtime_log
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc  13834240 Dec  3 02:36 result.tar.gz
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc      8817 Dec  3 02:36 runtime_log.err
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc       662 Dec  3 02:36 4S3KDmB21i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmjHOKDm9qYTxn.diag
[2025-12-03 02:36:05] -rw-r--r--. 1 boinc boinc     21265 Dec  3 02:36 stderr.txt
[2025-12-03 02:36:05] HITS file was successfully produced:
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc 926824744 Dec  3 02:32 shared/HITS.pool.root.1
[2025-12-03 02:36:05]  *** Contents of shared directory: ***
[2025-12-03 02:36:05] total 1319028
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc 409409063 Dec  2 02:48 ATLAS.root_0
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc     15847 Dec  2 02:48 start_atlas.sh
[2025-12-03 02:36:05] -rw-r--r--. 2 boinc boinc    590108 Dec  2 02:48 input.tar.gz
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc 926824744 Dec  3 02:32 HITS.pool.root.1
[2025-12-03 02:36:05] -rw-------. 1 boinc boinc  13834240 Dec  3 02:36 result.tar.gz
02:36:07 (1712): run_atlas exited; CPU time 320896.712104
02:36:07 (1712): called boinc_finish(0)

</stderr_txt>
]]>

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