Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
22:50:23 (2189155): wrapper (7.7.26015): starting
22:50:23 (2189155): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 22:50:23] Arguments: --nthreads 8
[2025-11-29 22:50:23] Threads: 8
[2025-11-29 22:50:23] Checking for CVMFS
[2025-11-29 22:50:24] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 22:50:24] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 22:50:24] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 22:50:25] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 22:50:25] 2.13.3.0 10223 35270 290272 153466 1 551 27307321 40960000 43914 16776704 0 452158050 99.750 296241841 49875 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.231.239:6081 1
[2025-11-29 22:50:25] CVMFS is ok
[2025-11-29 22:50:25] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 22:50:25] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 22:50:25] Further information can be found at the LHC@home message board.
[2025-11-29 22:50:25] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 22:50:25] Checking for apptainer binary...
[2025-11-29 22:50:25] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 22:50:25] Running /usr/bin/apptainer --version
[2025-11-29 22:50:25] apptainer version 1.4.4-1.el9
[2025-11-29 22:50:25] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 22:50:26] c8-7-6.aglt2.org
[2025-11-29 22:50:26] apptainer works
[2025-11-29 22:50:26] Set ATHENA_PROC_NUMBER=8
[2025-11-29 22:50:26] Set ATHENA_CORE_NUMBER=8
[2025-11-29 22:50:26] Starting ATLAS job with PandaID=6893862549
[2025-11-29 22:50:26] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 07:35:03]  *** The last 200 lines of the pilot log: ***
[2025-11-30 07:35:03] 2025-11-30 12:33:46,896 | INFO     | .. there are 73 such processes running
[2025-11-30 07:35:03] 2025-11-30 12:33:47,862 | INFO     | monitor loop #1817: job 0:6893862549 is in state 'finished'
[2025-11-30 07:35:03] 2025-11-30 12:33:47,862 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 07:35:03] 2025-11-30 12:33:47,897 | INFO     | time since job start (31367s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:49,905 | INFO     | time since job start (31369s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:50,376 | INFO     | monitor loop #1818: job 0:6893862549 is in state 'finished'
[2025-11-30 07:35:03] 2025-11-30 12:33:50,376 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 07:35:03] 2025-11-30 12:33:51,912 | INFO     | time since job start (31371s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:52,881 | INFO     | monitor loop #1819: job 0:6893862549 is in state 'finished'
[2025-11-30 07:35:03] 2025-11-30 12:33:52,881 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 07:35:03] 2025-11-30 12:33:53,919 | INFO     | time since job start (31373s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:55,389 | INFO     | monitor loop #1820: job 0:6893862549 is in state 'finished'
[2025-11-30 07:35:03] 2025-11-30 12:33:55,389 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 07:35:03] 2025-11-30 12:33:55,926 | INFO     | time since job start (31375s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:57,843 | INFO     | CPU arch script returned: x86-64-v4
[2025-11-30 07:35:03] 2025-11-30 12:33:57,847 | INFO     | found 64 cores (32 cores per socket, 2 sockets) HT, CPU MHz: 3799.9946015625005
[2025-11-30 07:35:03] 2025-11-30 12:33:57,917 | INFO     | using path: /tmp/boinchome/slots/6/PanDA_Pilot-6893862549/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 07:35:03] 2025-11-30 12:33:57,918 | INFO     | extracted standard info from prmon json
[2025-11-30 07:35:03] 2025-11-30 12:33:57,918 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 07:35:03] 2025-11-30 12:33:57,918 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 07:35:03] 2025-11-30 12:33:57,937 | INFO     | time since job start (31377s) is within the limit (172800.0s)
[2025-11-30 07:35:03] 2025-11-30 12:33:57,937 | INFO     | monitor loop #1821: job 0:6893862549 is in state 'finished'
[2025-11-30 07:35:03] 2025-11-30 12:33:57,937 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 07:35:03] 2025-11-30 12:33:57,940 | INFO     | fitting pss+swap vs Time
[2025-11-30 07:35:03] 2025-11-30 12:33:57,940 | INFO     | sum of square deviations: 41866131414.98253
[2025-11-30 07:35:03] 2025-11-30 12:33:57,962 | INFO     | sum of deviations: -295222884506.7777
[2025-11-30 07:35:03] 2025-11-30 12:33:57,962 | INFO     | mean x: 1764490341.4502923
[2025-11-30 07:35:03] 2025-11-30 12:33:57,962 | INFO     | mean y: 2796798.185185185
[2025-11-30 07:35:03] 2025-11-30 12:33:57,962 | INFO     | intersect: 12445263075.374695
[2025-11-30 07:35:03] 2025-11-30 12:33:57,962 | INFO     | chi2: 23.15191507356819
[2025-11-30 07:35:03] 2025-11-30 12:33:57,963 | INFO     | sum of square deviations: 40654499639.874374
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | sum of deviations: -124968567440.70929
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | mean x: 1764490188.984252
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | mean y: 2818212.6614173227
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | intersect: 5426715029.344259
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | chi2: 19.377569605114246
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | current chi2=19.377569605114246 (change=16.30251949551679 %)
[2025-11-30 07:35:03] 2025-11-30 12:33:57,983 | INFO     | right removable region: 507
[2025-11-30 07:35:03] 2025-11-30 12:33:57,984 | INFO     | sum of square deviations: 40653419939.87439
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | sum of deviations: -472195276498.66943
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | mean x: 1764490493.984252
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | mean y: 2819041.0413385825
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | intersect: 20497628036.65427
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | chi2: 20.005587790933944
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | current chi2=20.005587790933944 (change=13.589922356903894 %)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,000 | INFO     | left removable region: 10
[2025-11-30 07:35:03] 2025-11-30 12:33:58,001 | INFO     | sum of square deviations: 38069716696.837364
[2025-11-30 07:35:03] 2025-11-30 12:33:58,020 | INFO     | sum of deviations: -342880360580.5191
[2025-11-30 07:35:03] 2025-11-30 12:33:58,021 | INFO     | mean x: 1764490463.55332
[2025-11-30 07:35:03] 2025-11-30 12:33:58,021 | INFO     | mean y: 2854559.1327967807
[2025-11-30 07:35:03] 2025-11-30 12:33:58,021 | INFO     | intersect: 15894990852.18566
[2025-11-30 07:35:03] 2025-11-30 12:33:58,021 | INFO     | chi2: 14.818076993687717
[2025-11-30 07:35:03] 2025-11-30 12:33:58,021 | INFO     | current memory leak: -9.01 B/s (using 497 data points, chi2=14.82)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | could have reported an average CPU frequency of 3778 MHz (20 samples)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | ..............................
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . Timing measurements:
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . get job = 0 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . initial setup = 2 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . payload setup = 16 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . stage-in = 0 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . payload execution = 31268 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . stage-out = 7 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | . log creation = 2 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,022 | INFO     | ..............................
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | 
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | job summary report
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | --------------------------------------------------
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | PanDA job id: 6893862549
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | task id: 47523449
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | errors: (none)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | pilot state: finished 
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | transexitcode: 0
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | exeerrorcode: 0
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | exeerrordiag: 
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | exitcode: 0
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | exitmsg: OK
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | cpuconsumptiontime: 134039 s
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | nevents: 1000
[2025-11-30 07:35:03] 2025-11-30 12:33:58,480 | INFO     | neventsw: 0
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | pid: 2230633
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | pgrp: 2230633
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | corecount: 8
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | event service: False
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | sizes: {0: 2284144, 1: 2284343, 11: 2284343, 13: 2284633, 22: 2284689, 31289: 2324246, 31297: 2333296, 31346: 2333486}
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | --------------------------------------------------
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | 
[2025-11-30 07:35:03] 2025-11-30 12:33:58,481 | INFO     | executing command: ls -lF /tmp/boinchome/slots/6
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,719 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 07:35:03] 2025-11-30 12:33:58,720 | INFO     | job 6893862549 has completed (purged errors)
[2025-11-30 07:35:03] 2025-11-30 12:33:58,720 | INFO     | overall cleanup function is called
[2025-11-30 07:35:03] 2025-11-30 12:33:59,838 | INFO     | --- collectZombieJob: --- 10, [2230633]
[2025-11-30 07:35:03] 2025-11-30 12:33:59,838 | INFO     | zombie collector waiting for pid 2230633
[2025-11-30 07:35:03] 2025-11-30 12:33:59,838 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 07:35:03] 2025-11-30 12:33:59,838 | INFO     | collected zombie processes
[2025-11-30 07:35:03] 2025-11-30 12:33:59,838 | INFO     | will attempt to kill all subprocesses of pid=2230633
[2025-11-30 07:35:03] 2025-11-30 12:34:02,726 | INFO     | process IDs to be killed: [2230633] (in reverse order)
[2025-11-30 07:35:03] 2025-11-30 12:34:03,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 07:35:03] 2025-11-30 12:34:03,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 07:35:03] 2025-11-30 12:34:03,333 | INFO     | did not find any defunct processes belonging to 2230633
[2025-11-30 07:35:03] 2025-11-30 12:34:03,486 | INFO     | did not find any defunct processes belonging to 2230633
[2025-11-30 07:35:03] 2025-11-30 12:34:03,519 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 07:35:03] 2025-11-30 12:34:03,519 | INFO     | ready for new job
[2025-11-30 07:35:03] 2025-11-30 12:34:03,519 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 07:35:03] 2025-11-30 12:34:03,521 | INFO     | ***************************************
[2025-11-30 07:35:03] 2025-11-30 12:34:03,521 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 07:35:03] 2025-11-30 12:34:03,521 | INFO     | ***************************************
[2025-11-30 07:35:03] 2025-11-30 12:34:03,521 | INFO     | 
[2025-11-30 07:35:03] 2025-11-30 12:34:03,539 | INFO     | architecture information:
[2025-11-30 07:35:03] 2025-11-30 12:34:03,558 | INFO     | executing command: cat /etc/os-release
[2025-11-30 07:35:03] 2025-11-30 12:34:03,611 | INFO     | cat /etc/os-release:
[2025-11-30 07:35:03] NAME="CentOS Linux"
[2025-11-30 07:35:03] VERSION="7 (Core)"
[2025-11-30 07:35:03] ID="centos"
[2025-11-30 07:35:03] ID_LIKE="rhel fedora"
[2025-11-30 07:35:03] VERSION_ID="7"
[2025-11-30 07:35:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 07:35:03] ANSI_COLOR="0;31"
[2025-11-30 07:35:03] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 07:35:03] HOME_URL="https://www.centos.org/"
[2025-11-30 07:35:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 07:35:03] 
[2025-11-30 07:35:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 07:35:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 07:35:03] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 07:35:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 07:35:03] 
[2025-11-30 07:35:03] 2025-11-30 12:34:03,611 | INFO     | ***************************************
[2025-11-30 07:35:03] 2025-11-30 12:34:04,115 | INFO     | executing command: df -mP /tmp/boinchome/slots/6
[2025-11-30 07:35:03] 2025-11-30 12:34:04,201 | INFO     | sufficient remaining disk space (160723632128 B)
[2025-11-30 07:35:03] 2025-11-30 12:34:04,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 07:35:03] 2025-11-30 12:34:04,202 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 07:35:03] 2025-11-30 12:34:04,202 | INFO     | update_server=False
[2025-11-30 07:35:03] 2025-11-30 12:34:04,202 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 07:35:03] 2025-11-30 12:34:04,202 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 07:35:03] 2025-11-30 12:34:04,202 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 07:35:03] 2025-11-30 12:34:04,203 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 07:35:03] 2025-11-30 12:34:04,203 | INFO     | aborting loop
[2025-11-30 07:35:03] 2025-11-30 12:34:04,685 | INFO     | all payload control threads have been joined
[2025-11-30 07:35:03] 2025-11-30 12:34:04,957 | INFO     | all data control threads have been joined
[2025-11-30 07:35:03] 2025-11-30 12:34:05,209 | INFO     | [job] retrieve thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,209 | INFO     | [job] queue monitor thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,213 | INFO     | [job] job monitor thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,415 | INFO     | [payload] failed_post thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,535 | INFO     | all job control threads have been joined
[2025-11-30 07:35:03] 2025-11-30 12:34:05,691 | INFO     | [payload] control thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,842 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,858 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:05,964 | INFO     | [data] control thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,013 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 07:35:03] 2025-11-30 12:34:06,120 | INFO     | [job] validate thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,212 | INFO     | [data] copytool_out thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,351 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,351 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,352 | INFO     | [data] copytool_in thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,546 | INFO     | [payload] validate_post thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:06,558 | INFO     | [job] control thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:10,041 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 07:35:03] 2025-11-30 12:34:32,410 | INFO     | PID=2201885 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 07:35:03] 2025-11-30 12:34:32,410 | INFO     | .. there are 74 such processes running
[2025-11-30 07:35:03] 2025-11-30 12:34:32,411 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 07:35:03] 2025-11-30 12:34:32,411 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 07:35:03] 2025-11-30 12:34:32,411 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 07:35:03] 2025-11-30 12:34:54,874 | INFO     | [monitor] cgroup control has ended
[2025-11-30 07:35:03] 2025-11-30 12:34:56,562 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140657542281024)>', '<ExcThread(monitor, started 140657192580864)>']
[2025-11-30 07:35:03] 2025-11-30 12:34:56,616 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 07:35:03] 2025-11-30 12:34:56,616 | INFO     | [monitor] control thread has ended
[2025-11-30 07:35:03] 2025-11-30 12:35:01,588 | INFO     | all workflow threads have been joined
[2025-11-30 07:35:03] 2025-11-30 12:35:01,588 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 07:35:03] 2025-11-30 12:35:01,588 | INFO     | traces error code: 0
[2025-11-30 07:35:03] 2025-11-30 12:35:01,588 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 07:35:03] 2025-11-30 12:35:01,924 [wrapper] ==== pilot stdout END ====
[2025-11-30 07:35:03] 2025-11-30 12:35:01,963 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 07:35:03] 2025-11-30 12:35:01,987 [wrapper] pilotpid: 2201885
[2025-11-30 07:35:03] 2025-11-30 12:35:01,996 [wrapper] Pilot exit status: 0
[2025-11-30 07:35:03] 2025-11-30 12:35:02,097 [wrapper] pandaids: 6893862549
[2025-11-30 07:35:03] 2025-11-30 12:35:02,329 [wrapper] cleanup supervisor_pilot 1208524 2201886
[2025-11-30 07:35:03] 2025-11-30 12:35:02,480 [wrapper] Test setup, not cleaning
[2025-11-30 07:35:03] 2025-11-30 12:35:02,525 [wrapper] apfmon messages muted
[2025-11-30 07:35:03] 2025-11-30 12:35:02,568 [wrapper] ==== wrapper stdout END ====
[2025-11-30 07:35:03] 2025-11-30 12:35:02,625 [wrapper] ==== wrapper stderr END ====
[2025-11-30 07:35:03]  *** Error codes and diagnostics ***
[2025-11-30 07:35:03]     "exeErrorCode": 0,
[2025-11-30 07:35:03]     "exeErrorDiag": "",
[2025-11-30 07:35:03]     "pilotErrorCode": 0,
[2025-11-30 07:35:03]     "pilotErrorDiag": "",
[2025-11-30 07:35:03]  *** Listing of results directory ***
[2025-11-30 07:35:03] total 1320440
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas    576529 Nov 20 09:06 pilot3.tar.gz
[2025-11-30 07:35:03] -rwx------. 1 boincer umatlas     36292 Nov 20 09:10 runpilot2-wrapper.sh
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas      5112 Nov 20 09:10 queuedata.json
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas       100 Nov 29 22:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 07:35:03] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 29 22:50 run_atlas
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas       105 Nov 29 22:50 job.xml
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas 409650003 Nov 29 22:50 EVNT.47493127._000589.pool.root.1
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 22:50 start_atlas.sh
[2025-11-30 07:35:03] drwxrwx--x. 2 boincer umatlas      4096 Nov 29 22:50 shared
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas    590096 Nov 29 22:50 input.tar.gz
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas         0 Nov 29 22:50 boinc_lockfile
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas      2786 Nov 29 22:50 pandaJob.out
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas        57 Nov 29 22:50 setup.sh.local
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas    991420 Nov 29 22:50 agis_schedconf.cvmfs.json
[2025-11-30 07:35:03] drwx------. 5 boincer umatlas      4096 Nov 29 22:51 pilot3
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas       533 Nov 30 07:02 boinc_task_state.xml
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas      7174 Nov 30 07:31 init_data.xml
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas 927265625 Nov 30 07:31 HITS.47523449._005883.pool.root.1
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas      1072 Nov 30 07:32 memory_monitor_summary.json
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas   1516240 Nov 30 07:33 agis_ddmendpoints.agis.ALL.json
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas   1760183 Nov 30 07:33 log.47523449._005883.job.log.tgz.1
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas      8632 Nov 30 07:33 heartbeat.json
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas        95 Nov 30 07:34 pilot_heartbeat.json
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas      4825 Nov 30 07:35 pilotlog.txt
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas   3885184 Nov 30 07:35 log.47523449._005883.job.log.1
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas       353 Nov 30 07:35 output.list
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas      8192 Nov 30 07:35 boinc_mmap_file
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas       620 Nov 30 07:35 runtime_log
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas   5662720 Nov 30 07:35 result.tar.gz
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas      9333 Nov 30 07:35 runtime_log.err
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas       664 Nov 30 07:35 pIcKDmNYKg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmu2HKDmh0cPkn.diag
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas        29 Nov 30 07:35 wrapper_checkpoint.txt
[2025-11-30 07:35:03] -rw-r--r--. 1 boincer umatlas     21750 Nov 30 07:35 stderr.txt
[2025-11-30 07:35:03] HITS file was successfully produced:
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas 927265625 Nov 30 07:31 shared/HITS.pool.root.1
[2025-11-30 07:35:03]  *** Contents of shared directory: ***
[2025-11-30 07:35:03] total 1311724
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas 409650003 Nov 29 22:50 ATLAS.root_0
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 22:50 start_atlas.sh
[2025-11-30 07:35:03] -rw-r--r--. 2 boincer umatlas    590096 Nov 29 22:50 input.tar.gz
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas 927265625 Nov 30 07:31 HITS.pool.root.1
[2025-11-30 07:35:03] -rw-------. 1 boincer umatlas   5662720 Nov 30 07:35 result.tar.gz
07:35:05 (2189155): run_atlas exited; CPU time 134768.365363
07:35:05 (2189155): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN