Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
22:53:27 (15607): wrapper (7.7.26015): starting
22:53:27 (15607): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 22:53:27] Arguments: --nthreads 12
[2025-11-29 22:53:27] Threads: 12
[2025-11-29 22:53:27] Checking for CVMFS
[2025-11-29 22:53:27] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 22:53:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 22:53:27] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 22:53:27] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 22:53:27] 2.11.2.0 2981 292881 88460 153466 3 82 14419491 20275200 1 130560 1 133092721 99.969 17005278 14311 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 22:53:27] CVMFS is ok
[2025-11-29 22:53:27] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 22:53:27] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 22:53:27] Further information can be found at the LHC@home message board.
[2025-11-29 22:53:27] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 22:53:27] Checking for apptainer binary...
[2025-11-29 22:53:27] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 22:53:27] Running /usr/bin/apptainer --version
[2025-11-29 22:53:27] apptainer version 1.3.2-1.el7
[2025-11-29 22:53:27] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 22:53:28] c-205-30.aglt2.org
[2025-11-29 22:53:28] apptainer works
[2025-11-29 22:53:28] Set ATHENA_PROC_NUMBER=12
[2025-11-29 22:53:28] Set ATHENA_CORE_NUMBER=12
[2025-11-29 22:53:29] Starting ATLAS job with PandaID=6893851170
[2025-11-29 22:53:29] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 06:20:34]  *** The last 200 lines of the pilot log: ***
[2025-11-30 06:20:34] 2025-11-30 11:19:53,064 | INFO     | monitor loop #2006: job 0:6893851170 is in state 'finished'
[2025-11-30 06:20:34] 2025-11-30 11:19:53,072 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,834 | INFO     | time since job start (26769s) is within the limit (172800.0s)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,958 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 06:20:34] 2025-11-30 11:19:53,961 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1695.8333333333333
[2025-11-30 06:20:34] 2025-11-30 11:19:53,963 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6893851170/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,963 | INFO     | extracted standard info from prmon json
[2025-11-30 06:20:34] 2025-11-30 11:19:53,963 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 06:20:34] 2025-11-30 11:19:53,964 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 06:20:34] 2025-11-30 11:19:53,970 | INFO     | fitting pss+swap vs Time
[2025-11-30 06:20:34] 2025-11-30 11:19:53,971 | INFO     | sum of square deviations: 26234518374.44195
[2025-11-30 06:20:34] 2025-11-30 11:19:53,975 | INFO     | sum of deviations: 491463342363.7548
[2025-11-30 06:20:34] 2025-11-30 11:19:53,975 | INFO     | mean x: 1764488212.2164009
[2025-11-30 06:20:34] 2025-11-30 11:19:53,975 | INFO     | mean y: 3396881.0341685647
[2025-11-30 06:20:34] 2025-11-30 11:19:53,975 | INFO     | intersect: -33051575272.83389
[2025-11-30 06:20:34] 2025-11-30 11:19:53,976 | INFO     | chi2: 8.311415867082532
[2025-11-30 06:20:34] 2025-11-30 11:19:53,977 | INFO     | sum of square deviations: 25348326081.70532
[2025-11-30 06:20:34] 2025-11-30 11:19:53,980 | INFO     | sum of deviations: 662386771699.696
[2025-11-30 06:20:34] 2025-11-30 11:19:53,981 | INFO     | mean x: 1764488059.718894
[2025-11-30 06:20:34] 2025-11-30 11:19:53,981 | INFO     | mean y: 3426265.866359447
[2025-11-30 06:20:34] 2025-11-30 11:19:53,981 | INFO     | intersect: -46105083850.83911
[2025-11-30 06:20:34] 2025-11-30 11:19:53,981 | INFO     | chi2: 5.162955841926896
[2025-11-30 06:20:34] 2025-11-30 11:19:53,981 | INFO     | current chi2=5.162955841926896 (change=37.88115136465679 %)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,982 | INFO     | sum of square deviations: 24482320213.962765
[2025-11-30 06:20:34] 2025-11-30 11:19:53,986 | INFO     | sum of deviations: 738833589635.9309
[2025-11-30 06:20:34] 2025-11-30 11:19:53,986 | INFO     | mean x: 1764487907.2214453
[2025-11-30 06:20:34] 2025-11-30 11:19:53,986 | INFO     | mean y: 3439695.79020979
[2025-11-30 06:20:34] 2025-11-30 11:19:53,986 | INFO     | intersect: -53245718185.01009
[2025-11-30 06:20:34] 2025-11-30 11:19:53,987 | INFO     | chi2: 4.322049223306323
[2025-11-30 06:20:34] 2025-11-30 11:19:53,987 | INFO     | current chi2=4.322049223306323 (change=16.287309912508068 %)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,987 | INFO     | right removable region: 428
[2025-11-30 06:20:34] 2025-11-30 11:19:53,987 | INFO     | sum of square deviations: 25348268131.70533
[2025-11-30 06:20:34] 2025-11-30 11:19:53,991 | INFO     | sum of deviations: 305927721293.1748
[2025-11-30 06:20:34] 2025-11-30 11:19:53,992 | INFO     | mean x: 1764488364.718894
[2025-11-30 06:20:34] 2025-11-30 11:19:53,992 | INFO     | mean y: 3428784.698156682
[2025-11-30 06:20:34] 2025-11-30 11:19:53,992 | INFO     | intersect: -21292144619.450443
[2025-11-30 06:20:34] 2025-11-30 11:19:53,992 | INFO     | chi2: 5.00417796155679
[2025-11-30 06:20:34] 2025-11-30 11:19:53,992 | INFO     | current chi2=5.00417796155679 (change=39.79151035654587 %)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,993 | INFO     | sum of square deviations: 24482204313.962765
[2025-11-30 06:20:34] 2025-11-30 11:19:53,997 | INFO     | sum of deviations: 221345292279.18628
[2025-11-30 06:20:34] 2025-11-30 11:19:53,997 | INFO     | mean x: 1764488517.2214453
[2025-11-30 06:20:34] 2025-11-30 11:19:53,997 | INFO     | mean y: 3443627.8927738927
[2025-11-30 06:20:34] 2025-11-30 11:19:53,997 | INFO     | intersect: -15949418359.493826
[2025-11-30 06:20:34] 2025-11-30 11:19:53,998 | INFO     | chi2: 4.200291438585595
[2025-11-30 06:20:34] 2025-11-30 11:19:53,998 | INFO     | current chi2=4.200291438585595 (change=16.06430724780034 %)
[2025-11-30 06:20:34] 2025-11-30 11:19:53,998 | INFO     | left removable region: 20
[2025-11-30 06:20:34] 2025-11-30 11:19:53,998 | INFO     | sum of square deviations: 21060051059.8799
[2025-11-30 06:20:34] 2025-11-30 11:19:54,002 | INFO     | sum of deviations: 417679698560.0267
[2025-11-30 06:20:34] 2025-11-30 11:19:54,002 | INFO     | mean x: 1764488486.7328432
[2025-11-30 06:20:34] 2025-11-30 11:19:54,002 | INFO     | mean y: 3499257.468137255
[2025-11-30 06:20:34] 2025-11-30 11:19:54,002 | INFO     | intersect: -34991241123.5371
[2025-11-30 06:20:34] 2025-11-30 11:19:54,003 | INFO     | chi2: 0.08800700561489058
[2025-11-30 06:20:34] 2025-11-30 11:19:54,003 | INFO     | current memory leak: 19.83 B/s (using 408 data points, chi2=0.09)
[2025-11-30 06:20:34] 2025-11-30 11:19:54,003 | INFO     | could have reported an average CPU frequency of 2405 MHz (18 samples)
[2025-11-30 06:20:34] 2025-11-30 11:19:54,003 | INFO     | ..............................
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . Timing measurements:
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . get job = 0 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . initial setup = 2 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . payload setup = 7 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . stage-in = 0 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . payload execution = 26729 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . stage-out = 3 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | . log creation = 0 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,004 | INFO     | ..............................
[2025-11-30 06:20:34] 2025-11-30 11:19:54,084 | INFO     | 
[2025-11-30 06:20:34] 2025-11-30 11:19:54,084 | INFO     | job summary report
[2025-11-30 06:20:34] 2025-11-30 11:19:54,085 | INFO     | --------------------------------------------------
[2025-11-30 06:20:34] 2025-11-30 11:19:54,087 | INFO     | PanDA job id: 6893851170
[2025-11-30 06:20:34] 2025-11-30 11:19:54,087 | INFO     | task id: 47523449
[2025-11-30 06:20:34] 2025-11-30 11:19:54,087 | INFO     | errors: (none)
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | pilot state: finished 
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | transexitcode: 0
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | exeerrorcode: 0
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | exeerrordiag: 
[2025-11-30 06:20:34] 2025-11-30 11:19:54,088 | INFO     | exitcode: 0
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | exitmsg: OK
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | cpuconsumptiontime: 299759 s
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | nevents: 1000
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | neventsw: 0
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | pid: 25715
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | pgrp: 25715
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | corecount: 12
[2025-11-30 06:20:34] 2025-11-30 11:19:54,089 | INFO     | event service: False
[2025-11-30 06:20:34] 2025-11-30 11:19:54,090 | INFO     | sizes: {0: 2284143, 1: 2284342, 6: 2284604, 11: 2284632, 26741: 2322233, 26745: 2331227, 26747: 2331411, 26754: 2331657}
[2025-11-30 06:20:34] 2025-11-30 11:19:54,090 | INFO     | --------------------------------------------------
[2025-11-30 06:20:34] 2025-11-30 11:19:54,090 | INFO     | 
[2025-11-30 06:20:34] 2025-11-30 11:19:54,090 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 06:20:34] 2025-11-30 11:19:54,114 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,114 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,115 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 06:20:34] 2025-11-30 11:19:54,117 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,118 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 06:20:34] 2025-11-30 11:19:54,118 | INFO     | job 6893851170 has completed (purged errors)
[2025-11-30 06:20:34] 2025-11-30 11:19:54,118 | INFO     | overall cleanup function is called
[2025-11-30 06:20:34] 2025-11-30 11:19:54,958 | INFO     | PID=19293 has CPU usage=11.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 06:20:34] 2025-11-30 11:19:55,132 | INFO     | --- collectZombieJob: --- 10, [25715]
[2025-11-30 06:20:34] 2025-11-30 11:19:55,132 | INFO     | zombie collector waiting for pid 25715
[2025-11-30 06:20:34] 2025-11-30 11:19:55,132 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 06:20:34] 2025-11-30 11:19:55,132 | INFO     | collected zombie processes
[2025-11-30 06:20:34] 2025-11-30 11:19:55,133 | INFO     | will attempt to kill all subprocesses of pid=25715
[2025-11-30 06:20:34] 2025-11-30 11:19:55,225 | INFO     | process IDs to be killed: [25715] (in reverse order)
[2025-11-30 06:20:34] 2025-11-30 11:19:55,276 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 06:20:34] 2025-11-30 11:19:55,277 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 06:20:34] 2025-11-30 11:19:55,280 | INFO     | did not find any defunct processes belonging to 25715
[2025-11-30 06:20:34] 2025-11-30 11:19:55,283 | INFO     | did not find any defunct processes belonging to 25715
[2025-11-30 06:20:34] 2025-11-30 11:19:55,286 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 06:20:34] 2025-11-30 11:19:55,286 | INFO     | ready for new job
[2025-11-30 06:20:34] 2025-11-30 11:19:55,286 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 06:20:34] 2025-11-30 11:19:55,289 | INFO     | ***************************************
[2025-11-30 06:20:34] 2025-11-30 11:19:55,289 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 06:20:34] 2025-11-30 11:19:55,290 | INFO     | ***************************************
[2025-11-30 06:20:34] 2025-11-30 11:19:55,290 | INFO     | 
[2025-11-30 06:20:34] 2025-11-30 11:19:55,290 | INFO     | architecture information:
[2025-11-30 06:20:34] 2025-11-30 11:19:55,291 | INFO     | executing command: cat /etc/os-release
[2025-11-30 06:20:34] 2025-11-30 11:19:55,306 | INFO     | cat /etc/os-release:
[2025-11-30 06:20:34] NAME="CentOS Linux"
[2025-11-30 06:20:34] VERSION="7 (Core)"
[2025-11-30 06:20:34] ID="centos"
[2025-11-30 06:20:34] ID_LIKE="rhel fedora"
[2025-11-30 06:20:34] VERSION_ID="7"
[2025-11-30 06:20:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 06:20:34] ANSI_COLOR="0;31"
[2025-11-30 06:20:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 06:20:34] HOME_URL="https://www.centos.org/"
[2025-11-30 06:20:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 06:20:34] 
[2025-11-30 06:20:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 06:20:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 06:20:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 06:20:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 06:20:34] 
[2025-11-30 06:20:34] 2025-11-30 11:19:55,307 | INFO     | ***************************************
[2025-11-30 06:20:34] 2025-11-30 11:19:55,809 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 06:20:34] 2025-11-30 11:19:55,826 | INFO     | sufficient remaining disk space (28247588864 B)
[2025-11-30 06:20:34] 2025-11-30 11:19:55,826 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 06:20:34] 2025-11-30 11:19:55,827 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 06:20:34] 2025-11-30 11:19:55,827 | INFO     | update_server=False
[2025-11-30 06:20:34] 2025-11-30 11:19:55,827 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 06:20:34] 2025-11-30 11:19:55,827 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:20:34] 2025-11-30 11:19:55,828 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 06:20:34] 2025-11-30 11:19:55,828 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 06:20:34] 2025-11-30 11:19:55,829 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 06:20:34] 2025-11-30 11:19:55,829 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 06:20:34] 2025-11-30 11:19:55,829 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 06:20:34] 2025-11-30 11:19:56,581 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:20:34] 2025-11-30 11:19:56,581 | INFO     | aborting loop
[2025-11-30 06:20:34] 2025-11-30 11:19:56,717 | INFO     | all data control threads have been joined
[2025-11-30 06:20:34] 2025-11-30 11:19:56,829 | INFO     | [job] queue monitor thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:56,830 | INFO     | [job] retrieve thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:56,920 | INFO     | [data] copytool_in thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,141 | INFO     | all job control threads have been joined
[2025-11-30 06:20:34] 2025-11-30 11:19:57,210 | INFO     | all payload control threads have been joined
[2025-11-30 06:20:34] 2025-11-30 11:19:57,586 | INFO     | [job] job monitor thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,596 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 06:20:34] 2025-11-30 11:19:57,680 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,723 | INFO     | [data] control thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,729 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,767 | INFO     | [payload] failed_post thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,832 | INFO     | [payload] validate_post thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,834 | INFO     | [data] copytool_out thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:57,913 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:58,146 | INFO     | [job] control thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:58,216 | INFO     | [payload] control thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:58,217 | INFO     | [job] validate thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:19:58,246 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:20:01,602 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 06:20:34] 2025-11-30 11:20:27,003 | INFO     | [monitor] cgroup control has ended
[2025-11-30 06:20:34] 2025-11-30 11:20:28,939 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140439347078976)>', '<ExcThread(monitor, started 140438736443136)>']
[2025-11-30 06:20:34] 2025-11-30 11:20:28,980 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 06:20:34] 2025-11-30 11:20:28,981 | INFO     | [monitor] control thread has ended
[2025-11-30 06:20:34] 2025-11-30 11:20:33,980 | INFO     | all workflow threads have been joined
[2025-11-30 06:20:34] 2025-11-30 11:20:33,986 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 06:20:34] 2025-11-30 11:20:33,987 | INFO     | traces error code: 0
[2025-11-30 06:20:34] 2025-11-30 11:20:33,987 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 06:20:34] 2025-11-30 11:20:34,087 [wrapper] ==== pilot stdout END ====
[2025-11-30 06:20:34] 2025-11-30 11:20:34,091 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 06:20:34] 2025-11-30 11:20:34,095 [wrapper] pilotpid: 19293
[2025-11-30 06:20:34] 2025-11-30 11:20:34,099 [wrapper] Pilot exit status: 0
[2025-11-30 06:20:34] 2025-11-30 11:20:34,112 [wrapper] pandaids: 6893851170
[2025-11-30 06:20:34] 2025-11-30 11:20:34,157 [wrapper] cleanup supervisor_pilot 16287 19294
[2025-11-30 06:20:34] 2025-11-30 11:20:34,161 [wrapper] Test setup, not cleaning
[2025-11-30 06:20:34] 2025-11-30 11:20:34,164 [wrapper] apfmon messages muted
[2025-11-30 06:20:34] 2025-11-30 11:20:34,168 [wrapper] ==== wrapper stdout END ====
[2025-11-30 06:20:34] 2025-11-30 11:20:34,171 [wrapper] ==== wrapper stderr END ====
[2025-11-30 06:20:34]  *** Error codes and diagnostics ***
[2025-11-30 06:20:34]     "exeErrorCode": 0,
[2025-11-30 06:20:34]     "exeErrorDiag": "",
[2025-11-30 06:20:34]     "pilotErrorCode": 0,
[2025-11-30 06:20:34]     "pilotErrorDiag": "",
[2025-11-30 06:20:34]  *** Listing of results directory ***
[2025-11-30 06:20:34] total 1311280
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas    576529 Nov 20 06:09 pilot3.tar.gz
[2025-11-30 06:20:34] -rwx------ 1 boincer umatlas     36292 Nov 20 06:36 runpilot2-wrapper.sh
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas      5112 Nov 20 06:36 queuedata.json
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas       100 Nov 29 22:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 06:20:34] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 22:53 run_atlas
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas       105 Nov 29 22:53 job.xml
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas 409662996 Nov 29 22:53 EVNT.47493127._000349.pool.root.1
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 22:53 start_atlas.sh
[2025-11-30 06:20:34] drwxrwx--x 2 boincer umatlas      4096 Nov 29 22:53 shared
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas    590102 Nov 29 22:53 input.tar.gz
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas         0 Nov 29 22:53 boinc_lockfile
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas      2785 Nov 29 22:53 pandaJob.out
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas        57 Nov 29 22:53 setup.sh.local
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas    991420 Nov 29 22:53 agis_schedconf.cvmfs.json
[2025-11-30 06:20:34] drwx------ 5 boincer umatlas      4096 Nov 29 22:53 pilot3
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas       533 Nov 30 06:08 boinc_task_state.xml
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas      5955 Nov 30 06:11 init_data.xml
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas        95 Nov 30 06:19 pilot_heartbeat.json
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas 917281357 Nov 30 06:19 HITS.47523449._003485.pool.root.1
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas      1065 Nov 30 06:19 memory_monitor_summary.json
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas   1516240 Nov 30 06:19 agis_ddmendpoints.agis.ALL.json
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas   2195510 Nov 30 06:19 log.47523449._003485.job.log.tgz.1
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas      8670 Nov 30 06:19 heartbeat.json
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 06:20 boinc_mmap_file
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas        29 Nov 30 06:20 wrapper_checkpoint.txt
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas      4552 Nov 30 06:20 pilotlog.txt
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas   3748896 Nov 30 06:20 log.47523449._003485.job.log.1
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas       353 Nov 30 06:20 output.list
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas       620 Nov 30 06:20 runtime_log
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas   5959680 Nov 30 06:20 result.tar.gz
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas      9345 Nov 30 06:20 runtime_log.err
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas       670 Nov 30 06:20 2COODmr8Hg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmFYGKDmuhFdgn.diag
[2025-11-30 06:20:34] -rw-r--r-- 1 boincer umatlas     21345 Nov 30 06:20 stderr.txt
[2025-11-30 06:20:34] HITS file was successfully produced:
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas 917281357 Nov 30 06:19 shared/HITS.pool.root.1
[2025-11-30 06:20:34]  *** Contents of shared directory: ***
[2025-11-30 06:20:34] total 1302268
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas 409662996 Nov 29 22:53 ATLAS.root_0
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 22:53 start_atlas.sh
[2025-11-30 06:20:34] -rw-r--r-- 2 boincer umatlas    590102 Nov 29 22:53 input.tar.gz
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas 917281357 Nov 30 06:19 HITS.pool.root.1
[2025-11-30 06:20:34] -rw------- 1 boincer umatlas   5959680 Nov 30 06:20 result.tar.gz
06:20:35 (15607): run_atlas exited; CPU time 293018.108876
06:20:35 (15607): called boinc_finish(0)

</stderr_txt>
]]>

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