Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
20:41:28 (31264): wrapper (7.7.26015): starting
20:41:28 (31264): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 20:41:28] Arguments: --nthreads 8
[2025-11-29 20:41:28] Threads: 8
[2025-11-29 20:41:28] Checking for CVMFS
[2025-11-29 20:41:28] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 20:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 20:41:28] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 20:41:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 20:41:29] 2.11.2.0 2880 158510 85120 153463 0 82 17680985 20275201 1 130560 0 61652079 99.975 5619949 22468 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 20:41:29] CVMFS is ok
[2025-11-29 20:41:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 20:41:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 20:41:29] Further information can be found at the LHC@home message board.
[2025-11-29 20:41:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 20:41:29] Checking for apptainer binary...
[2025-11-29 20:41:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 20:41:29] Running /usr/bin/apptainer --version
[2025-11-29 20:41:29] apptainer version 1.3.2-1.el7
[2025-11-29 20:41:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 20:41:30] c-115-10.aglt2.org
[2025-11-29 20:41:30] apptainer works
[2025-11-29 20:41:30] Set ATHENA_PROC_NUMBER=8
[2025-11-29 20:41:30] Set ATHENA_CORE_NUMBER=8
[2025-11-29 20:41:30] Starting ATLAS job with PandaID=6899134382
[2025-11-29 20:41:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 06:35:53]  *** The last 200 lines of the pilot log: ***
[2025-11-30 06:35:53] 2025-11-30 11:35:31,082 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,471 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 06:35:53] 2025-11-30 11:35:31,475 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.75
[2025-11-30 06:35:53] 2025-11-30 11:35:31,477 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899134382/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,478 | INFO     | extracted standard info from prmon json
[2025-11-30 06:35:53] 2025-11-30 11:35:31,478 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 06:35:53] 2025-11-30 11:35:31,478 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 06:35:53] 2025-11-30 11:35:31,487 | INFO     | fitting pss+swap vs Time
[2025-11-30 06:35:53] 2025-11-30 11:35:31,488 | INFO     | sum of square deviations: 61761260134.68496
[2025-11-30 06:35:53] 2025-11-30 11:35:31,494 | INFO     | sum of deviations: 713870711333.4514
[2025-11-30 06:35:53] 2025-11-30 11:35:31,494 | INFO     | mean x: 1764484729.0753424
[2025-11-30 06:35:53] 2025-11-30 11:35:31,495 | INFO     | mean y: 3580252.4897260275
[2025-11-30 06:35:53] 2025-11-30 11:35:31,495 | INFO     | intersect: -20391307512.674755
[2025-11-30 06:35:53] 2025-11-30 11:35:31,495 | INFO     | chi2: 8.015566739640269
[2025-11-30 06:35:53] 2025-11-30 11:35:31,496 | INFO     | sum of square deviations: 60188570333.01599
[2025-11-30 06:35:53] 2025-11-30 11:35:31,502 | INFO     | sum of deviations: 955484856135.0931
[2025-11-30 06:35:53] 2025-11-30 11:35:31,502 | INFO     | mean x: 1764484576.5803108
[2025-11-30 06:35:53] 2025-11-30 11:35:31,503 | INFO     | mean y: 3603657.481865285
[2025-11-30 06:35:53] 2025-11-30 11:35:31,503 | INFO     | intersect: -28007334008.56235
[2025-11-30 06:35:53] 2025-11-30 11:35:31,503 | INFO     | chi2: 4.811287073196121
[2025-11-30 06:35:53] 2025-11-30 11:35:31,503 | INFO     | current chi2=4.811287073196121 (change=39.975709398035065 %)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,504 | INFO     | sum of square deviations: 58642811268.817184
[2025-11-30 06:35:53] 2025-11-30 11:35:31,510 | INFO     | sum of deviations: 1001783407843.6937
[2025-11-30 06:35:53] 2025-11-30 11:35:31,511 | INFO     | mean x: 1764484424.0853658
[2025-11-30 06:35:53] 2025-11-30 11:35:31,511 | INFO     | mean y: 3608206.618466899
[2025-11-30 06:35:53] 2025-11-30 11:35:31,511 | INFO     | intersect: -30138726057.41567
[2025-11-30 06:35:53] 2025-11-30 11:35:31,511 | INFO     | chi2: 4.549507108843092
[2025-11-30 06:35:53] 2025-11-30 11:35:31,511 | INFO     | current chi2=4.549507108843092 (change=5.440954995419337 %)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,512 | INFO     | right removable region: 573
[2025-11-30 06:35:53] 2025-11-30 11:35:31,512 | INFO     | sum of square deviations: 60188365373.01599
[2025-11-30 06:35:53] 2025-11-30 11:35:31,519 | INFO     | sum of deviations: 452734373106.04724
[2025-11-30 06:35:53] 2025-11-30 11:35:31,519 | INFO     | mean x: 1764484881.5803108
[2025-11-30 06:35:53] 2025-11-30 11:35:31,519 | INFO     | mean y: 3605561.407599309
[2025-11-30 06:35:53] 2025-11-30 11:35:31,519 | INFO     | intersect: -13268776098.512045
[2025-11-30 06:35:53] 2025-11-30 11:35:31,520 | INFO     | chi2: 4.647068261284613
[2025-11-30 06:35:53] 2025-11-30 11:35:31,520 | INFO     | current chi2=4.647068261284613 (change=42.024458004909974 %)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,520 | INFO     | sum of square deviations: 58642401348.81718
[2025-11-30 06:35:53] 2025-11-30 11:35:31,527 | INFO     | sum of deviations: 320577841738.7071
[2025-11-30 06:35:53] 2025-11-30 11:35:31,527 | INFO     | mean x: 1764485034.0853658
[2025-11-30 06:35:53] 2025-11-30 11:35:31,527 | INFO     | mean y: 3618564.25087108
[2025-11-30 06:35:53] 2025-11-30 11:35:31,527 | INFO     | intersect: -9642214331.348055
[2025-11-30 06:35:53] 2025-11-30 11:35:31,528 | INFO     | chi2: 3.6035570290935484
[2025-11-30 06:35:53] 2025-11-30 11:35:31,528 | INFO     | current chi2=3.6035570290935484 (change=22.455259391920386 %)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,528 | INFO     | left removable region: 20
[2025-11-30 06:35:53] 2025-11-30 11:35:31,529 | INFO     | sum of square deviations: 52438810318.87883
[2025-11-30 06:35:53] 2025-11-30 11:35:31,535 | INFO     | sum of deviations: 557404078036.8849
[2025-11-30 06:35:53] 2025-11-30 11:35:31,535 | INFO     | mean x: 1764485003.5985534
[2025-11-30 06:35:53] 2025-11-30 11:35:31,535 | INFO     | mean y: 3652745.855334539
[2025-11-30 06:35:53] 2025-11-30 11:35:31,535 | INFO     | intersect: -18752133868.294334
[2025-11-30 06:35:53] 2025-11-30 11:35:31,536 | INFO     | chi2: 0.05002302272601128
[2025-11-30 06:35:53] 2025-11-30 11:35:31,536 | INFO     | current memory leak: 10.63 B/s (using 553 data points, chi2=0.05)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,536 | INFO     | could have reported an average CPU frequency of 2389 MHz (23 samples)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,536 | INFO     | ..............................
[2025-11-30 06:35:53] 2025-11-30 11:35:31,536 | INFO     | . Timing measurements:
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . get job = 0 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . initial setup = 2 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . payload setup = 16 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . stage-in = 0 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . payload execution = 35576 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . stage-out = 3 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | . log creation = 0 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,537 | INFO     | ..............................
[2025-11-30 06:35:53] 2025-11-30 11:35:31,621 | INFO     | 
[2025-11-30 06:35:53] 2025-11-30 11:35:31,621 | INFO     | job summary report
[2025-11-30 06:35:53] 2025-11-30 11:35:31,621 | INFO     | --------------------------------------------------
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | PanDA job id: 6899134382
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | task id: 47531111
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | errors: (none)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | pilot state: finished 
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | transexitcode: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | exeerrorcode: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | exeerrordiag: 
[2025-11-30 06:35:53] 2025-11-30 11:35:31,622 | INFO     | exitcode: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | exitmsg: OK
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | cpuconsumptiontime: 274312 s
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | nevents: 1000
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | neventsw: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | pid: 9858
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | pgrp: 9858
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | corecount: 8
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | event service: False
[2025-11-30 06:35:53] 2025-11-30 11:35:31,623 | INFO     | sizes: {0: 2284449, 6: 2284711, 11: 2284739, 35596: 2345541, 35600: 2354535, 35601: 2354591, 35607: 2354965}
[2025-11-30 06:35:53] 2025-11-30 11:35:31,624 | INFO     | --------------------------------------------------
[2025-11-30 06:35:53] 2025-11-30 11:35:31,624 | INFO     | 
[2025-11-30 06:35:53] 2025-11-30 11:35:31,624 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-30 06:35:53] 2025-11-30 11:35:31,653 | INFO     | time since job start (35623s) is within the limit (172800.0s)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,654 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,654 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,654 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,654 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,655 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,656 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,657 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,657 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,657 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,657 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 06:35:53] 2025-11-30 11:35:31,657 | INFO     | job 6899134382 has completed (purged errors)
[2025-11-30 06:35:53] 2025-11-30 11:35:31,658 | INFO     | overall cleanup function is called
[2025-11-30 06:35:53] 2025-11-30 11:35:32,673 | INFO     | --- collectZombieJob: --- 10, [9858]
[2025-11-30 06:35:53] 2025-11-30 11:35:32,673 | INFO     | zombie collector waiting for pid 9858
[2025-11-30 06:35:53] 2025-11-30 11:35:32,674 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 06:35:53] 2025-11-30 11:35:32,674 | INFO     | collected zombie processes
[2025-11-30 06:35:53] 2025-11-30 11:35:32,674 | INFO     | will attempt to kill all subprocesses of pid=9858
[2025-11-30 06:35:53] 2025-11-30 11:35:32,756 | INFO     | process IDs to be killed: [9858] (in reverse order)
[2025-11-30 06:35:53] 2025-11-30 11:35:32,809 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 06:35:53] 2025-11-30 11:35:32,810 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 06:35:53] 2025-11-30 11:35:32,814 | INFO     | did not find any defunct processes belonging to 9858
[2025-11-30 06:35:53] 2025-11-30 11:35:32,818 | INFO     | did not find any defunct processes belonging to 9858
[2025-11-30 06:35:53] 2025-11-30 11:35:32,820 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 06:35:53] 2025-11-30 11:35:32,821 | INFO     | ready for new job
[2025-11-30 06:35:53] 2025-11-30 11:35:32,821 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 06:35:53] 2025-11-30 11:35:32,824 | INFO     | ***************************************
[2025-11-30 06:35:53] 2025-11-30 11:35:32,824 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 06:35:53] 2025-11-30 11:35:32,824 | INFO     | ***************************************
[2025-11-30 06:35:53] 2025-11-30 11:35:32,824 | INFO     | 
[2025-11-30 06:35:53] 2025-11-30 11:35:32,824 | INFO     | architecture information:
[2025-11-30 06:35:53] 2025-11-30 11:35:32,825 | INFO     | executing command: cat /etc/os-release
[2025-11-30 06:35:53] 2025-11-30 11:35:32,844 | INFO     | cat /etc/os-release:
[2025-11-30 06:35:53] NAME="CentOS Linux"
[2025-11-30 06:35:53] VERSION="7 (Core)"
[2025-11-30 06:35:53] ID="centos"
[2025-11-30 06:35:53] ID_LIKE="rhel fedora"
[2025-11-30 06:35:53] VERSION_ID="7"
[2025-11-30 06:35:53] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 06:35:53] ANSI_COLOR="0;31"
[2025-11-30 06:35:53] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 06:35:53] HOME_URL="https://www.centos.org/"
[2025-11-30 06:35:53] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 06:35:53] 
[2025-11-30 06:35:53] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 06:35:53] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 06:35:53] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 06:35:53] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 06:35:53] 
[2025-11-30 06:35:53] 2025-11-30 11:35:32,844 | INFO     | ***************************************
[2025-11-30 06:35:53] 2025-11-30 11:35:33,348 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-30 06:35:53] 2025-11-30 11:35:33,368 | INFO     | sufficient remaining disk space (17739808768 B)
[2025-11-30 06:35:53] 2025-11-30 11:35:33,369 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 06:35:53] 2025-11-30 11:35:33,369 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 06:35:53] 2025-11-30 11:35:33,369 | INFO     | update_server=False
[2025-11-30 06:35:53] 2025-11-30 11:35:33,369 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 06:35:53] 2025-11-30 11:35:33,370 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 06:35:53] 2025-11-30 11:35:33,371 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:35:53] 2025-11-30 11:35:33,371 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2025-11-30 06:35:53] 2025-11-30 11:35:33,371 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 06:35:53] 2025-11-30 11:35:33,371 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 06:35:53] 2025-11-30 11:35:33,372 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 06:35:53] 2025-11-30 11:35:33,537 | INFO     | all data control threads have been joined
[2025-11-30 06:35:53] 2025-11-30 11:35:33,586 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 06:35:53] 2025-11-30 11:35:33,586 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 06:35:53] 2025-11-30 11:35:33,587 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:35:53] 2025-11-30 11:35:33,587 | INFO     | will abort loop
[2025-11-30 06:35:53] 2025-11-30 11:35:33,748 | INFO     | all job control threads have been joined
[2025-11-30 06:35:53] 2025-11-30 11:35:34,205 | INFO     | all payload control threads have been joined
[2025-11-30 06:35:53] 2025-11-30 11:35:34,372 | INFO     | [job] retrieve thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,376 | INFO     | [job] queue monitor thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,408 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,541 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,542 | INFO     | [data] control thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,558 | INFO     | [data] copytool_in thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,593 | INFO     | [job] job monitor thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,654 | INFO     | [payload] failed_post thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,753 | INFO     | [job] control thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:34,991 | INFO     | [payload] validate_post thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:35,209 | INFO     | [payload] control thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:35,376 | INFO     | [data] copytool_out thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:35,587 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:35,669 | INFO     | [job] validate thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:35,682 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:36,079 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 06:35:53] 2025-11-30 11:35:40,085 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 06:35:53] 2025-11-30 11:35:46,642 | INFO     | [monitor] cgroup control has ended
[2025-11-30 06:35:53] 2025-11-30 11:35:48,309 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139700244637504)>', '<ExcThread(monitor, started 139699364550400)>']
[2025-11-30 06:35:53] 2025-11-30 11:35:48,444 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 06:35:53] 2025-11-30 11:35:48,445 | INFO     | [monitor] control thread has ended
[2025-11-30 06:35:53] 2025-11-30 11:35:53,334 | INFO     | all workflow threads have been joined
[2025-11-30 06:35:53] 2025-11-30 11:35:53,335 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 06:35:53] 2025-11-30 11:35:53,335 | INFO     | traces error code: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:53,336 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 06:35:53] 2025-11-30 11:35:53,445 [wrapper] ==== pilot stdout END ====
[2025-11-30 06:35:53] 2025-11-30 11:35:53,449 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 06:35:53] 2025-11-30 11:35:53,454 [wrapper] pilotpid: 2587
[2025-11-30 06:35:53] 2025-11-30 11:35:53,459 [wrapper] Pilot exit status: 0
[2025-11-30 06:35:53] 2025-11-30 11:35:53,475 [wrapper] pandaids: 6899134382
[2025-11-30 06:35:53] 2025-11-30 11:35:53,519 [wrapper] cleanup supervisor_pilot  8490 2588
[2025-11-30 06:35:53] 2025-11-30 11:35:53,524 [wrapper] Test setup, not cleaning
[2025-11-30 06:35:53] 2025-11-30 11:35:53,527 [wrapper] apfmon messages muted
[2025-11-30 06:35:53] 2025-11-30 11:35:53,532 [wrapper] ==== wrapper stdout END ====
[2025-11-30 06:35:53] 2025-11-30 11:35:53,536 [wrapper] ==== wrapper stderr END ====
[2025-11-30 06:35:53]  *** Error codes and diagnostics ***
[2025-11-30 06:35:53]     "exeErrorCode": 0,
[2025-11-30 06:35:53]     "exeErrorDiag": "",
[2025-11-30 06:35:53]     "pilotErrorCode": 0,
[2025-11-30 06:35:53]     "pilotErrorDiag": "",
[2025-11-30 06:35:53]  *** Listing of results directory ***
[2025-11-30 06:35:53] total 1083164
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas    576529 Nov 28 17:41 pilot3.tar.gz
[2025-11-30 06:35:53] -rwx------ 1 boincer umatlas     36292 Nov 28 17:46 runpilot2-wrapper.sh
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas      5112 Nov 28 17:49 queuedata.json
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas       100 Nov 29 20:41 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 06:35:53] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 20:41 run_atlas
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas       105 Nov 29 20:41 job.xml
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas 376381246 Nov 29 20:41 EVNT.47531104._000068.pool.root.1
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 20:41 start_atlas.sh
[2025-11-30 06:35:53] drwxrwx--x 2 boincer umatlas      4096 Nov 29 20:41 shared
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas    590120 Nov 29 20:41 input.tar.gz
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas         0 Nov 29 20:41 boinc_lockfile
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas      2878 Nov 29 20:41 pandaJob.out
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas        57 Nov 29 20:41 setup.sh.local
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas    991828 Nov 29 20:41 agis_schedconf.cvmfs.json
[2025-11-30 06:35:53] drwx------ 5 boincer umatlas      4096 Nov 29 20:41 pilot3
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas       533 Nov 30 06:26 boinc_task_state.xml
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas      5913 Nov 30 06:30 init_data.xml
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas 715115129 Nov 30 06:34 HITS.47531111._000664.pool.root.1
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas        95 Nov 30 06:35 pilot_heartbeat.json
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas      1062 Nov 30 06:35 memory_monitor_summary.json
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas   1516240 Nov 30 06:35 agis_ddmendpoints.agis.ALL.json
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas   1953972 Nov 30 06:35 log.47531111._000664.job.log.tgz.1
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas        29 Nov 30 06:35 wrapper_checkpoint.txt
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas      8192 Nov 30 06:35 boinc_mmap_file
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas     28181 Nov 30 06:35 heartbeat.json
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas      4738 Nov 30 06:35 pilotlog.txt
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas   4900801 Nov 30 06:35 log.47531111._000664.job.log.1
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas       353 Nov 30 06:35 output.list
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas       620 Nov 30 06:35 runtime_log
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas   6891520 Nov 30 06:35 result.tar.gz
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas       667 Nov 30 06:35 VzjNDmjPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmBwOKDmwnF9bn.diag
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas      9343 Nov 30 06:35 runtime_log.err
[2025-11-30 06:35:53] -rw-r--r-- 1 boincer umatlas     21203 Nov 30 06:35 stderr.txt
[2025-11-30 06:35:53] HITS file was successfully produced:
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas 715115129 Nov 30 06:34 shared/HITS.pool.root.1
[2025-11-30 06:35:53]  *** Contents of shared directory: ***
[2025-11-30 06:35:53] total 1073248
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas 376381246 Nov 29 20:41 ATLAS.root_0
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 20:41 start_atlas.sh
[2025-11-30 06:35:53] -rw-r--r-- 2 boincer umatlas    590120 Nov 29 20:41 input.tar.gz
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas 715115129 Nov 30 06:34 HITS.pool.root.1
[2025-11-30 06:35:53] -rw------- 1 boincer umatlas   6891520 Nov 30 06:35 result.tar.gz
06:35:54 (31264): run_atlas exited; CPU time 272356.795804
06:35:54 (31264): called boinc_finish(0)

</stderr_txt>
]]>

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