Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
10:54:35 (3196336): wrapper (7.7.26015): starting
10:54:35 (3196336): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 10:54:35] Arguments: --nthreads 12
[2025-11-30 10:54:35] Threads: 12
[2025-11-30 10:54:35] Checking for CVMFS
[2025-11-30 10:54:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 10:54:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 10:54:35] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 10:54:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 10:54:35] 2.13.0.0 498242 16363 43136 153477 1 81 73502901 82903041 1302 130560 29 7395646 99.984 514559 230 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-30 10:54:35] CVMFS is ok
[2025-11-30 10:54:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 10:54:35] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-30 10:54:35] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-30 10:54:35] Further information can be found at the LHC@home message board.
[2025-11-30 10:54:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 10:54:35] Checking for apptainer binary...
[2025-11-30 10:54:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-30 10:54:35] Running /usr/bin/apptainer --version
[2025-11-30 10:54:35] apptainer version 1.4.4
[2025-11-30 10:54:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 10:54:35] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-11-30 10:54:35] apptainer works
[2025-11-30 10:54:35] Set ATHENA_PROC_NUMBER=12
[2025-11-30 10:54:35] Set ATHENA_CORE_NUMBER=12
[2025-11-30 10:54:35] Starting ATLAS job with PandaID=6899133455
[2025-11-30 10:54:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 13:53:22]  *** The last 200 lines of the pilot log: ***
[2025-11-30 13:53:22] 2025-11-30 13:52:48,827 | INFO     | log transfer has been attempted: DONE
[2025-11-30 13:53:22] 2025-11-30 13:52:48,827 | INFO     | job 6899133455 has finished - writing final server update
[2025-11-30 13:53:22] 2025-11-30 13:52:48,827 | INFO     | total number of processed events: 1000 (read)
[2025-11-30 13:53:22] 2025-11-30 13:52:48,827 | INFO     | executing command: lscpu
[2025-11-30 13:53:22] 2025-11-30 13:52:48,834 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-30 13:53:22] 2025-11-30 13:52:49,215 | INFO     | time since job start (10690s) is within the limit (172800.0s)
[2025-11-30 13:53:22] 2025-11-30 13:52:49,800 | INFO     | monitor loop #808: job 0:6899133455 is in state 'finished'
[2025-11-30 13:53:22] 2025-11-30 13:52:49,800 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,417 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 13:53:22] 2025-11-30 13:52:50,418 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3255.4683333333337
[2025-11-30 13:53:22] 2025-11-30 13:52:50,418 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6899133455/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,418 | INFO     | extracted standard info from prmon json
[2025-11-30 13:53:22] 2025-11-30 13:52:50,418 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 13:53:22] 2025-11-30 13:52:50,419 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | fitting pss+swap vs Time
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | sum of square deviations: 1661908319.7942886
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | sum of deviations: 119700433934.7828
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | mean x: 1764505406.6057143
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | mean y: 4015002.4171428573
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | intersect: -127086065921.61255
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | chi2: 3.6194170819754605
[2025-11-30 13:53:22] 2025-11-30 13:52:50,420 | INFO     | sum of square deviations: 1523507766.8764687
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | sum of deviations: 144424407109.48227
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | mean x: 1764505254.1117647
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | mean y: 4041647.6588235293
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | intersect: -167266274071.92038
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | chi2: 2.733661426987261
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | current chi2=2.733661426987261 (change=24.472328966982676 %)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | right removable region: 169
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | sum of square deviations: 1523474521.6470668
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | sum of deviations: 47327959562.82353
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | mean x: 1764505559.1176472
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | mean y: 4094243.2588235294
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | intersect: -54811688077.808205
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | chi2: 0.9483011653226266
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | current chi2=0.9483011653226266 (change=73.79961624082715 %)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,421 | INFO     | sum of square deviations: 1392968832.945453
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | sum of deviations: 38290901984.30907
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | mean x: 1764505711.6181817
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | mean y: 4104748.83030303
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | intersect: -48499862932.52777
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | chi2: 0.9364257574117121
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | current chi2=0.9364257574117121 (change=1.2522823281435465 %)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | left removable region: 20
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | sum of square deviations: 1025775546.1476489
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | sum of deviations: 48936514414.865746
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | mean x: 1764505833.6442952
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | mean y: 4154146.9597315434
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | intersect: -84174851179.82529
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | chi2: 0.008754740567104851
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | current memory leak: 47.71 B/s (using 149 data points, chi2=0.01)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | could have reported an average CPU frequency of 3580 MHz (9 samples)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | ..............................
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . Timing measurements:
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . get job = 0 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . initial setup = 1 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . payload setup = 5 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . stage-in = 0 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . payload execution = 10665 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . stage-out = 0 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | . log creation = 0 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,422 | INFO     | ..............................
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | 
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | job summary report
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | --------------------------------------------------
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | PanDA job id: 6899133455
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | task id: 47531058
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | errors: (none)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | pilot state: finished 
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | transexitcode: 0
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | exeerrorcode: 0
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | exeerrordiag: 
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | exitcode: 0
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | exitmsg: OK
[2025-11-30 13:53:22] 2025-11-30 13:52:50,447 | INFO     | cpuconsumptiontime: 103628 s
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | nevents: 1000
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | neventsw: 0
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | pid: 3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | pgrp: 3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | corecount: 12
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | event service: False
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | sizes: {0: 2284461, 2: 2284723, 11: 2284751, 10671: 2333182, 10673: 2342190, 10676: 2342246, 10679: 2342684}
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | --------------------------------------------------
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | 
[2025-11-30 13:53:22] 2025-11-30 13:52:50,448 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-30 13:53:22] 2025-11-30 13:52:50,454 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | job 6899133455 has completed (purged errors)
[2025-11-30 13:53:22] 2025-11-30 13:52:50,455 | INFO     | overall cleanup function is called
[2025-11-30 13:53:22] 2025-11-30 13:52:51,463 | INFO     | --- collectZombieJob: --- 10, [3207196]
[2025-11-30 13:53:22] 2025-11-30 13:52:51,463 | INFO     | zombie collector waiting for pid 3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:51,463 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 13:53:22] 2025-11-30 13:52:51,463 | INFO     | collected zombie processes
[2025-11-30 13:53:22] 2025-11-30 13:52:51,463 | INFO     | will attempt to kill all subprocesses of pid=3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:51,489 | INFO     | process IDs to be killed: [3207196] (in reverse order)
[2025-11-30 13:53:22] 2025-11-30 13:52:51,505 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 13:53:22] 2025-11-30 13:52:51,505 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 13:53:22] 2025-11-30 13:52:51,506 | INFO     | did not find any defunct processes belonging to 3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:51,507 | INFO     | did not find any defunct processes belonging to 3207196
[2025-11-30 13:53:22] 2025-11-30 13:52:51,507 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 13:53:22] 2025-11-30 13:52:51,507 | INFO     | ready for new job
[2025-11-30 13:53:22] 2025-11-30 13:52:51,507 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | ***************************************
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | ***************************************
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | 
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | architecture information:
[2025-11-30 13:53:22] 2025-11-30 13:52:51,517 | INFO     | executing command: cat /etc/os-release
[2025-11-30 13:53:22] 2025-11-30 13:52:51,521 | INFO     | cat /etc/os-release:
[2025-11-30 13:53:22] NAME="CentOS Linux"
[2025-11-30 13:53:22] VERSION="7 (Core)"
[2025-11-30 13:53:22] ID="centos"
[2025-11-30 13:53:22] ID_LIKE="rhel fedora"
[2025-11-30 13:53:22] VERSION_ID="7"
[2025-11-30 13:53:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 13:53:22] ANSI_COLOR="0;31"
[2025-11-30 13:53:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 13:53:22] HOME_URL="https://www.centos.org/"
[2025-11-30 13:53:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 13:53:22] 
[2025-11-30 13:53:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 13:53:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 13:53:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 13:53:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 13:53:22] 
[2025-11-30 13:53:22] 2025-11-30 13:52:51,521 | INFO     | ***************************************
[2025-11-30 13:53:22] 2025-11-30 13:52:52,023 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-30 13:53:22] 2025-11-30 13:52:52,028 | INFO     | sufficient remaining disk space (351553978368 B)
[2025-11-30 13:53:22] 2025-11-30 13:52:52,028 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 13:53:22] 2025-11-30 13:52:52,028 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 13:53:22] 2025-11-30 13:52:52,029 | INFO     | update_server=False
[2025-11-30 13:53:22] 2025-11-30 13:52:52,029 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 13:53:22] 2025-11-30 13:52:52,029 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 13:53:22] 2025-11-30 13:52:52,303 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 13:53:22] 2025-11-30 13:52:52,304 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 13:53:22] 2025-11-30 13:52:52,304 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 13:53:22] 2025-11-30 13:52:52,304 | INFO     | will abort loop
[2025-11-30 13:53:22] 2025-11-30 13:52:52,472 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 13:53:22] 2025-11-30 13:52:53,029 | INFO     | [job] queue monitor thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:53,032 | INFO     | all data control threads have been joined
[2025-11-30 13:53:22] 2025-11-30 13:52:53,034 | INFO     | [job] retrieve thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:53,225 | INFO     | [payload] validate_post thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:53,307 | INFO     | [job] job monitor thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:53,339 | INFO     | all job control threads have been joined
[2025-11-30 13:53:22] 2025-11-30 13:52:53,439 | INFO     | all payload control threads have been joined
[2025-11-30 13:53:22] 2025-11-30 13:52:53,664 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 13:53:22] 2025-11-30 13:52:53,814 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:53,864 | INFO     | [data] copytool_in thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,037 | INFO     | [data] control thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,165 | INFO     | [job] validate thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,190 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,244 | INFO     | [payload] failed_post thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,251 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,344 | INFO     | [job] control thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,444 | INFO     | [payload] control thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:54,477 | INFO     | [data] copytool_out thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:52:56,927 | INFO     | [monitor] cgroup control has ended
[2025-11-30 13:53:22] 2025-11-30 13:52:57,669 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:53:02,746 | INFO     | job.realtimelogging is not enabled
[2025-11-30 13:53:22] 2025-11-30 13:53:03,752 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 13:53:22] 2025-11-30 13:53:04,186 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 132219867739968)>', '<ExcThread(monitor, started 132219024701184)>']
[2025-11-30 13:53:22] 2025-11-30 13:53:09,211 | INFO     | all workflow threads have been joined
[2025-11-30 13:53:22] 2025-11-30 13:53:09,211 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 13:53:22] 2025-11-30 13:53:09,211 | INFO     | traces error code: 0
[2025-11-30 13:53:22] 2025-11-30 13:53:09,211 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | INFO     | PID=3200066 has CPU usage=1.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 13:53:22] 2025-11-30 13:53:22,300 | INFO     | [monitor] control thread has ended
[2025-11-30 13:53:22] 2025-11-30 13:53:22,341 [wrapper] ==== pilot stdout END ====
[2025-11-30 13:53:22] 2025-11-30 13:53:22,342 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 13:53:22] 2025-11-30 13:53:22,343 [wrapper] pilotpid: 3200066
[2025-11-30 13:53:22] 2025-11-30 13:53:22,344 [wrapper] Pilot exit status: 0
[2025-11-30 13:53:22] 2025-11-30 13:53:22,347 [wrapper] pandaids: 6899133455
[2025-11-30 13:53:22] 2025-11-30 13:53:22,361 [wrapper] cleanup supervisor_pilot 3279599 3200067
[2025-11-30 13:53:22] 2025-11-30 13:53:22,361 [wrapper] Test setup, not cleaning
[2025-11-30 13:53:22] 2025-11-30 13:53:22,362 [wrapper] apfmon messages muted
[2025-11-30 13:53:22] 2025-11-30 13:53:22,363 [wrapper] ==== wrapper stdout END ====
[2025-11-30 13:53:22] 2025-11-30 13:53:22,364 [wrapper] ==== wrapper stderr END ====
[2025-11-30 13:53:22]  *** Error codes and diagnostics ***
[2025-11-30 13:53:22]     "exeErrorCode": 0,
[2025-11-30 13:53:22]     "exeErrorDiag": "",
[2025-11-30 13:53:22]     "pilotErrorCode": 0,
[2025-11-30 13:53:22]     "pilotErrorDiag": "",
[2025-11-30 13:53:22]  *** Listing of results directory ***
[2025-11-30 13:53:22] total 1062064
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc    576529 Nov 28 22:41 pilot3.tar.gz
[2025-11-30 13:53:22] -rwx------ 1 boinc boinc     36292 Nov 28 22:46 runpilot2-wrapper.sh
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc      5112 Nov 28 22:49 queuedata.json
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc       100 Nov 30 10:54 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 13:53:22] -rwxr-xr-x 1 boinc boinc      7986 Nov 30 10:54 run_atlas
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc       105 Nov 30 10:54 job.xml
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc 378631331 Nov 30 10:54 EVNT.47531050._000502.pool.root.1
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc     15847 Nov 30 10:54 start_atlas.sh
[2025-11-30 13:53:22] drwxrwx--x 2 boinc boinc      4096 Nov 30 10:54 shared
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc    590125 Nov 30 10:54 input.tar.gz
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc      9907 Nov 30 10:54 init_data.xml
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc         0 Nov 30 10:54 boinc_lockfile
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc      2881 Nov 30 10:54 pandaJob.out
[2025-11-30 13:53:22] -rw------- 1 boinc boinc    991788 Nov 30 10:54 agis_schedconf.cvmfs.json
[2025-11-30 13:53:22] -rw------- 1 boinc boinc   1516240 Nov 30 10:54 agis_ddmendpoints.agis.ALL.json
[2025-11-30 13:53:22] drwx------ 5 boinc boinc      4096 Nov 30 10:54 pilot3
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc       532 Nov 30 13:49 boinc_task_state.xml
[2025-11-30 13:53:22] -rw------- 1 boinc boinc 697816978 Nov 30 13:52 HITS.47531058._001199.pool.root.1
[2025-11-30 13:53:22] -rw------- 1 boinc boinc      1053 Nov 30 13:52 memory_monitor_summary.json
[2025-11-30 13:53:22] -rw------- 1 boinc boinc   2030688 Nov 30 13:52 log.47531058._001199.job.log.tgz.1
[2025-11-30 13:53:22] -rw------- 1 boinc boinc     27327 Nov 30 13:52 heartbeat.json
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc      8192 Nov 30 13:53 boinc_mmap_file
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc        29 Nov 30 13:53 wrapper_checkpoint.txt
[2025-11-30 13:53:22] -rw------- 1 boinc boinc        95 Nov 30 13:53 pilot_heartbeat.json
[2025-11-30 13:53:22] -rw------- 1 boinc boinc       747 Nov 30 13:53 pilotlog.txt
[2025-11-30 13:53:22] -rw------- 1 boinc boinc   1541385 Nov 30 13:53 log.47531058._001199.job.log.1
[2025-11-30 13:53:22] -rw------- 1 boinc boinc       353 Nov 30 13:53 output.list
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc       620 Nov 30 13:53 runtime_log
[2025-11-30 13:53:22] -rw------- 1 boinc boinc   3614720 Nov 30 13:53 result.tar.gz
[2025-11-30 13:53:22] -rw------- 1 boinc boinc       660 Nov 30 13:53 ZcvMDmZPMj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmauOKDmIb45Pn.diag
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc      9048 Nov 30 13:53 runtime_log.err
[2025-11-30 13:53:22] -rw-r--r-- 1 boinc boinc     21750 Nov 30 13:53 stderr.txt
[2025-11-30 13:53:22] HITS file was successfully produced:
[2025-11-30 13:53:22] -rw------- 1 boinc boinc 697816978 Nov 30 13:52 shared/HITS.pool.root.1
[2025-11-30 13:53:22]  *** Contents of shared directory: ***
[2025-11-30 13:53:22] total 1055360
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc 378631331 Nov 30 10:54 ATLAS.root_0
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc     15847 Nov 30 10:54 start_atlas.sh
[2025-11-30 13:53:22] -rw-r--r-- 2 boinc boinc    590125 Nov 30 10:54 input.tar.gz
[2025-11-30 13:53:22] -rw------- 1 boinc boinc 697816978 Nov 30 13:52 HITS.pool.root.1
[2025-11-30 13:53:22] -rw------- 1 boinc boinc   3614720 Nov 30 13:53 result.tar.gz
13:53:23 (3196336): run_atlas exited; CPU time 103301.508496
13:53:23 (3196336): called boinc_finish(0)

</stderr_txt>
]]>

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