Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
13:30:09 (1903405): wrapper (7.7.26015): starting
13:30:09 (1903405): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 13:30:09] Arguments: --nthreads 4
[2025-12-03 13:30:09] Threads: 4
[2025-12-03 13:30:09] Checking for CVMFS
[2025-12-03 13:30:09] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 13:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 13:30:09] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 13:30:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 13:30:09] 2.9.2.0 3051786 21393 113708 153594 1 68 18980627 36864001 0 130560 2 8480304 99.961 930135 694 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 13:30:09] CVMFS is ok
[2025-12-03 13:30:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 13:30:09] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 13:30:09] Further information can be found at the LHC@home message board.
[2025-12-03 13:30:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 13:30:09] Checking for apptainer binary...
[2025-12-03 13:30:09] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 13:30:09] Running /usr/bin/apptainer --version
[2025-12-03 13:30:09] apptainer version 1.4.1-1.1
[2025-12-03 13:30:09] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 13:30:09] atlasA139a
[2025-12-03 13:30:09] apptainer works
[2025-12-03 13:30:09] Set ATHENA_PROC_NUMBER=4
[2025-12-03 13:30:09] Set ATHENA_CORE_NUMBER=4
[2025-12-03 13:30:09] Starting ATLAS job with PandaID=6897912480
[2025-12-03 13:30:09] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 19:26:52]  *** The last 200 lines of the pilot log: ***
[2025-12-03 19:26:52] 2025-12-03 18:25:54,033 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,389 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 19:26:52] 2025-12-03 18:25:54,391 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3321.0811875
[2025-12-03 19:26:52] 2025-12-03 18:25:54,393 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6897912480/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,393 | INFO     | extracted standard info from prmon json
[2025-12-03 19:26:52] 2025-12-03 18:25:54,393 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 19:26:52] 2025-12-03 18:25:54,393 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 19:26:52] 2025-12-03 18:25:54,395 | INFO     | fitting pss+swap vs Time
[2025-12-03 19:26:52] 2025-12-03 18:25:54,396 | INFO     | sum of square deviations: 13294714387.5
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | sum of deviations: 165783265114.49994
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | mean x: 1764775689.5
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | mean y: 2751413.02
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | intersect: -22003759405.676815
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | chi2: 5.399617072692482
[2025-12-03 19:26:52] 2025-12-03 18:25:54,397 | INFO     | sum of square deviations: 12733038740.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | sum of deviations: 243792439387.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | mean x: 1764775537.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | mean y: 2772484.072463768
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | intersect: -33786407139.183193
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | chi2: 3.2258556307937667
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | current chi2=3.2258556307937667 (change=40.257696289096 %)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,399 | INFO     | sum of square deviations: 12187409905.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | sum of deviations: 238521454793.49997
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | mean x: 1764775384.5
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | mean y: 2771009.285294118
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | intersect: -34535887768.57406
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | chi2: 3.2249452455184917
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | current chi2=3.2249452455184917 (change=0.028221513281143647 %)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,400 | INFO     | right removable region: 339
[2025-12-03 19:26:52] 2025-12-03 18:25:54,401 | INFO     | sum of square deviations: 12733038740.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | sum of deviations: 60358667105.99997
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | mean x: 1764775842.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | mean y: 2779996.6289855074
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | intersect: -8362820685.112819
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | chi2: 2.726231887268489
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | current chi2=2.726231887268489 (change=49.510643985184075 %)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,402 | INFO     | sum of square deviations: 12187409905.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,403 | INFO     | sum of deviations: 24708207898.499996
[2025-12-03 19:26:52] 2025-12-03 18:25:54,403 | INFO     | mean x: 1764775994.5
[2025-12-03 19:26:52] 2025-12-03 18:25:54,403 | INFO     | mean y: 2789897.120588235
[2025-12-03 19:26:52] 2025-12-03 18:25:54,403 | INFO     | intersect: -3575037755.045189
[2025-12-03 19:26:52] 2025-12-03 18:25:54,404 | INFO     | chi2: 2.256250597931585
[2025-12-03 19:26:52] 2025-12-03 18:25:54,404 | INFO     | current chi2=2.256250597931585 (change=17.239226477091638 %)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,404 | INFO     | left removable region: 20
[2025-12-03 19:26:52] 2025-12-03 18:25:54,404 | INFO     | sum of square deviations: 10065751520.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | sum of deviations: 83517710251.00002
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | mean x: 1764775964.0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | mean y: 2815601.576802508
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | intersect: -14639911007.20414
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | chi2: 0.021810350134412734
[2025-12-03 19:26:52] 2025-12-03 18:25:54,405 | INFO     | current memory leak: 8.30 B/s (using 319 data points, chi2=0.02)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | could have reported an average CPU frequency of 3698 MHz (15 samples)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | ..............................
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . Timing measurements:
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . get job = 0 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . initial setup = 1 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . payload setup = 7 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . stage-in = 0 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . payload execution = 21298 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . stage-out = 1 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | . log creation = 0 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,406 | INFO     | ..............................
[2025-12-03 19:26:52] 2025-12-03 18:25:54,446 | INFO     | 
[2025-12-03 19:26:52] 2025-12-03 18:25:54,446 | INFO     | job summary report
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | --------------------------------------------------
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | PanDA job id: 6897912480
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | task id: 47538121
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | errors: (none)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | pilot state: finished 
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | transexitcode: 0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | exeerrorcode: 0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | exeerrordiag: 
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | exitcode: 0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | exitmsg: OK
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | cpuconsumptiontime: 83158 s
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | nevents: 1000
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | neventsw: 0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | pid: 1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | pgrp: 1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | corecount: 4
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | event service: False
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | sizes: {0: 2284454, 4: 2284716, 10: 2284744, 21309: 2339339, 21310: 2339338, 21312: 2348394, 21315: 2348578, 21322: 2348824}
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | --------------------------------------------------
[2025-12-03 19:26:52] 2025-12-03 18:25:54,447 | INFO     | 
[2025-12-03 19:26:52] 2025-12-03 18:25:54,448 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 19:26:52] 2025-12-03 18:25:54,468 | INFO     | job 6897912480 has completed (purged errors)
[2025-12-03 19:26:52] 2025-12-03 18:25:54,469 | INFO     | overall cleanup function is called
[2025-12-03 19:26:52] 2025-12-03 18:25:55,478 | INFO     | --- collectZombieJob: --- 10, [1914433]
[2025-12-03 19:26:52] 2025-12-03 18:25:55,479 | INFO     | zombie collector waiting for pid 1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:55,479 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 19:26:52] 2025-12-03 18:25:55,479 | INFO     | collected zombie processes
[2025-12-03 19:26:52] 2025-12-03 18:25:55,479 | INFO     | will attempt to kill all subprocesses of pid=1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:55,525 | INFO     | process IDs to be killed: [1914433] (in reverse order)
[2025-12-03 19:26:52] 2025-12-03 18:25:55,561 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 19:26:52] 2025-12-03 18:25:55,561 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 19:26:52] 2025-12-03 18:25:55,563 | INFO     | did not find any defunct processes belonging to 1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:55,564 | INFO     | did not find any defunct processes belonging to 1914433
[2025-12-03 19:26:52] 2025-12-03 18:25:55,565 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 19:26:52] 2025-12-03 18:25:55,565 | INFO     | ready for new job
[2025-12-03 19:26:52] 2025-12-03 18:25:55,565 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 19:26:52] 2025-12-03 18:25:55,566 | INFO     | ***************************************
[2025-12-03 19:26:52] 2025-12-03 18:25:55,566 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 19:26:52] 2025-12-03 18:25:55,567 | INFO     | ***************************************
[2025-12-03 19:26:52] 2025-12-03 18:25:55,567 | INFO     | 
[2025-12-03 19:26:52] 2025-12-03 18:25:55,567 | INFO     | architecture information:
[2025-12-03 19:26:52] 2025-12-03 18:25:55,567 | INFO     | executing command: cat /etc/os-release
[2025-12-03 19:26:52] 2025-12-03 18:25:55,583 | INFO     | cat /etc/os-release:
[2025-12-03 19:26:52] NAME="CentOS Linux"
[2025-12-03 19:26:52] VERSION="7 (Core)"
[2025-12-03 19:26:52] ID="centos"
[2025-12-03 19:26:52] ID_LIKE="rhel fedora"
[2025-12-03 19:26:52] VERSION_ID="7"
[2025-12-03 19:26:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 19:26:52] ANSI_COLOR="0;31"
[2025-12-03 19:26:52] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 19:26:52] HOME_URL="https://www.centos.org/"
[2025-12-03 19:26:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 19:26:52] 
[2025-12-03 19:26:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 19:26:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 19:26:52] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 19:26:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 19:26:52] 
[2025-12-03 19:26:52] 2025-12-03 18:25:55,583 | INFO     | ***************************************
[2025-12-03 19:26:52] 2025-12-03 18:25:56,086 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | INFO     | sufficient remaining disk space (337023860736 B)
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | INFO     | update_server=False
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 19:26:52] 2025-12-03 18:25:56,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 19:26:52] 2025-12-03 18:25:56,208 | INFO     | all payload control threads have been joined
[2025-12-03 19:26:52] 2025-12-03 18:25:56,537 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-03 19:26:52] 2025-12-03 18:25:56,537 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-03 19:26:52] 2025-12-03 18:25:56,537 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 19:26:52] 2025-12-03 18:25:56,537 | INFO     | will abort loop
[2025-12-03 19:26:52] 2025-12-03 18:25:56,804 | INFO     | all data control threads have been joined
[2025-12-03 19:26:52] 2025-12-03 18:25:56,986 | INFO     | all job control threads have been joined
[2025-12-03 19:26:52] 2025-12-03 18:25:57,111 | INFO     | [job] queue monitor thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,111 | INFO     | [job] retrieve thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,213 | INFO     | [payload] control thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,542 | INFO     | [data] copytool_in thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,542 | INFO     | [job] job monitor thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,718 | INFO     | [payload] validate_post thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,810 | INFO     | [data] control thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,915 | INFO     | [job] validate thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:57,952 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 19:26:52] 2025-12-03 18:25:57,992 | INFO     | [job] control thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:58,060 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:58,111 | INFO     | [data] copytool_out thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:58,203 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:58,280 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:25:58,419 | INFO     | [payload] failed_post thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:26:01,958 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:26:06,832 | INFO     | job.realtimelogging is not enabled
[2025-12-03 19:26:52] 2025-12-03 18:26:07,838 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 19:26:52] 2025-12-03 18:26:26,101 | INFO     | PID=1907192 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 19:26:52] 2025-12-03 18:26:26,102 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 19:26:52] 2025-12-03 18:26:26,102 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 19:26:52] 2025-12-03 18:26:26,102 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 19:26:52] 2025-12-03 18:26:46,471 | INFO     | [monitor] cgroup control has ended
[2025-12-03 19:26:52] 2025-12-03 18:26:47,291 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139924935337792)>', '<ExcThread(monitor, started 139923768198912)>']
[2025-12-03 19:26:52] 2025-12-03 18:26:48,215 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 19:26:52] 2025-12-03 18:26:48,216 | INFO     | [monitor] control thread has ended
[2025-12-03 19:26:52] 2025-12-03 18:26:52,317 | INFO     | all workflow threads have been joined
[2025-12-03 19:26:52] 2025-12-03 18:26:52,317 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 19:26:52] 2025-12-03 18:26:52,317 | INFO     | traces error code: 0
[2025-12-03 19:26:52] 2025-12-03 18:26:52,317 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 19:26:52] 2025-12-03 18:26:52,403 [wrapper] ==== pilot stdout END ====
[2025-12-03 19:26:52] 2025-12-03 18:26:52,408 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 19:26:52] 2025-12-03 18:26:52,412 [wrapper] pilotpid: 1907192
[2025-12-03 19:26:52] 2025-12-03 18:26:52,417 [wrapper] Pilot exit status: 0
[2025-12-03 19:26:52] 2025-12-03 18:26:52,429 [wrapper] pandaids: 6897912480
[2025-12-03 19:26:52] 2025-12-03 18:26:52,455 [wrapper] cleanup supervisor_pilot 1953926 1907193
[2025-12-03 19:26:52] 2025-12-03 18:26:52,459 [wrapper] Test setup, not cleaning
[2025-12-03 19:26:52] 2025-12-03 18:26:52,463 [wrapper] apfmon messages muted
[2025-12-03 19:26:52] 2025-12-03 18:26:52,468 [wrapper] ==== wrapper stdout END ====
[2025-12-03 19:26:52] 2025-12-03 18:26:52,472 [wrapper] ==== wrapper stderr END ====
[2025-12-03 19:26:52]  *** Error codes and diagnostics ***
[2025-12-03 19:26:52]     "exeErrorCode": 0,
[2025-12-03 19:26:52]     "exeErrorDiag": "",
[2025-12-03 19:26:52]     "pilotErrorCode": 0,
[2025-12-03 19:26:52]     "pilotErrorDiag": "",
[2025-12-03 19:26:52]  *** Listing of results directory ***
[2025-12-03 19:26:52] total 1065668
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc    576529 Nov 28 23:41 pilot3.tar.gz
[2025-12-03 19:26:52] -rwx------ 1 boinc boinc     36292 Nov 28 23:46 runpilot2-wrapper.sh
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc      5112 Nov 28 23:49 queuedata.json
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc       100 Dec  3 13:30 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 19:26:52] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 13:30 run_atlas
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc       105 Dec  3 13:30 job.xml
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc 379229372 Dec  3 13:30 EVNT.47528880._000040.pool.root.1
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc    590123 Dec  3 13:30 input.tar.gz
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc     15847 Dec  3 13:30 start_atlas.sh
[2025-12-03 19:26:52] drwxrwx--x 2 boinc boinc      4096 Dec  3 13:30 shared
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc         0 Dec  3 13:30 boinc_setup_complete
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc      6383 Dec  3 13:30 init_data.xml
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc         0 Dec  3 13:30 boinc_lockfile
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc      2880 Dec  3 13:30 pandaJob.out
[2025-12-03 19:26:52] -rw------- 1 boinc boinc    985783 Dec  3 13:30 agis_schedconf.cvmfs.json
[2025-12-03 19:26:52] drwx------ 5 boinc boinc      4096 Dec  3 13:30 pilot3
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc       531 Dec  3 19:22 boinc_task_state.xml
[2025-12-03 19:26:52] -rw------- 1 boinc boinc 699439392 Dec  3 19:25 HITS.47538121._000398.pool.root.1
[2025-12-03 19:26:52] -rw------- 1 boinc boinc      1027 Dec  3 19:25 memory_monitor_summary.json
[2025-12-03 19:26:52] -rw------- 1 boinc boinc   1516240 Dec  3 19:25 agis_ddmendpoints.agis.ALL.json
[2025-12-03 19:26:52] -rw------- 1 boinc boinc   1295363 Dec  3 19:25 log.47538121._000398.job.log.tgz.1
[2025-12-03 19:26:52] -rw------- 1 boinc boinc     28305 Dec  3 19:25 heartbeat.json
[2025-12-03 19:26:52] -rw------- 1 boinc boinc        95 Dec  3 19:26 pilot_heartbeat.json
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc      8192 Dec  3 19:26 boinc_mmap_file
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc        28 Dec  3 19:26 wrapper_checkpoint.txt
[2025-12-03 19:26:52] -rw------- 1 boinc boinc      5010 Dec  3 19:26 pilotlog.txt
[2025-12-03 19:26:52] -rw------- 1 boinc boinc   3015649 Dec  3 19:26 log.47538121._000398.job.log.1
[2025-12-03 19:26:52] -rw------- 1 boinc boinc       353 Dec  3 19:26 output.list
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc       620 Dec  3 19:26 runtime_log
[2025-12-03 19:26:52] -rw------- 1 boinc boinc   4352000 Dec  3 19:26 result.tar.gz
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc      8918 Dec  3 19:26 runtime_log.err
[2025-12-03 19:26:52] -rw------- 1 boinc boinc       669 Dec  3 19:26 lreKDmkPMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmidLKDm0Fc0Dn.diag
[2025-12-03 19:26:52] -rw-r--r-- 1 boinc boinc     21235 Dec  3 19:26 stderr.txt
[2025-12-03 19:26:52] HITS file was successfully produced:
[2025-12-03 19:26:52] -rw------- 1 boinc boinc 699439392 Dec  3 19:25 shared/HITS.pool.root.1
[2025-12-03 19:26:52]  *** Contents of shared directory: ***
[2025-12-03 19:26:52] total 1058248
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc 379229372 Dec  3 13:30 ATLAS.root_0
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc    590123 Dec  3 13:30 input.tar.gz
[2025-12-03 19:26:52] -rw-r--r-- 2 boinc boinc     15847 Dec  3 13:30 start_atlas.sh
[2025-12-03 19:26:52] -rw------- 1 boinc boinc 699439392 Dec  3 19:25 HITS.pool.root.1
[2025-12-03 19:26:52] -rw------- 1 boinc boinc   4352000 Dec  3 19:26 result.tar.gz
19:26:54 (1903405): run_atlas exited; CPU time 83159.655993
19:26:54 (1903405): called boinc_finish(0)

</stderr_txt>
]]>

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