Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:58:47 (28154): wrapper (7.7.26015): starting
07:58:47 (28154): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 07:58:47] Arguments: --nthreads 8
[2025-12-01 07:58:47] Threads: 8
[2025-12-01 07:58:47] Checking for CVMFS
[2025-12-01 07:58:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 07:58:48] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 07:58:48] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 07:58:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 07:58:50] 2.11.2.0 6427 179046 135360 153508 3 85 18676378 25165825 2504 130560 10 58282897 99.879 34454132 2324 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 07:58:50] CVMFS is ok
[2025-12-01 07:58:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 07:58:50] Checking for apptainer binary...
[2025-12-01 07:58:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 07:58:50] Running /usr/bin/apptainer --version
[2025-12-01 07:58:50] apptainer version 1.3.2-1.el7
[2025-12-01 07:58:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 07:59:14] cg-vwn308.simple-grid.lan
[2025-12-01 07:59:14] apptainer works
[2025-12-01 07:59:14] Set ATHENA_PROC_NUMBER=8
[2025-12-01 07:59:14] Set ATHENA_CORE_NUMBER=8
[2025-12-01 07:59:14] Starting ATLAS job with PandaID=6897912160
[2025-12-01 07:59:14] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 04:01:28]  *** The last 200 lines of the pilot log: ***
[2025-12-02 04:01:28] 2025-12-02 03:00:40,716 | INFO     | monitor loop #4865: job 0:6897912160 is in state 'finished'
[2025-12-02 04:01:28] 2025-12-02 03:00:40,717 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 04:01:28] 2025-12-02 03:00:42,338 | INFO     | time since job start (71860s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:43,220 | INFO     | monitor loop #4866: job 0:6897912160 is in state 'finished'
[2025-12-02 04:01:28] 2025-12-02 03:00:43,221 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 04:01:28] 2025-12-02 03:00:44,345 | INFO     | time since job start (71862s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:45,726 | INFO     | monitor loop #4867: job 0:6897912160 is in state 'finished'
[2025-12-02 04:01:28] 2025-12-02 03:00:45,727 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 04:01:28] 2025-12-02 03:00:46,352 | INFO     | time since job start (71864s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:48,230 | INFO     | monitor loop #4868: job 0:6897912160 is in state 'finished'
[2025-12-02 04:01:28] 2025-12-02 03:00:48,231 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 04:01:28] 2025-12-02 03:00:48,362 | INFO     | time since job start (71866s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:50,369 | INFO     | time since job start (71868s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:50,740 | INFO     | monitor loop #4869: job 0:6897912160 is in state 'finished'
[2025-12-02 04:01:28] 2025-12-02 03:00:50,741 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 04:01:28] 2025-12-02 03:00:52,376 | INFO     | time since job start (71870s) is within the limit (172800.0s)
[2025-12-02 04:01:28] 2025-12-02 03:00:52,920 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 04:01:28] 2025-12-02 03:00:52,921 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.9959999999996
[2025-12-02 04:01:28] 2025-12-02 03:00:52,923 | INFO     | using path: /var/lib/boinc/slots/6/PanDA_Pilot-6897912160/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 04:01:28] 2025-12-02 03:00:52,923 | INFO     | extracted standard info from prmon json
[2025-12-02 04:01:28] 2025-12-02 03:00:52,923 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 04:01:28] 2025-12-02 03:00:52,924 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 04:01:28] 2025-12-02 03:00:52,955 | INFO     | fitting pss+swap vs Time
[2025-12-02 04:01:28] 2025-12-02 03:00:52,957 | INFO     | sum of square deviations: 490293125728.5456
[2025-12-02 04:01:28] 2025-12-02 03:00:53,026 | INFO     | sum of deviations: 4259137727111.3286
[2025-12-02 04:01:28] 2025-12-02 03:00:53,026 | INFO     | mean x: 1764608820.0197425
[2025-12-02 04:01:28] 2025-12-02 03:00:53,026 | INFO     | mean y: 3297963.115879828
[2025-12-02 04:01:28] 2025-12-02 03:00:53,027 | INFO     | intersect: -15325719729.66046
[2025-12-02 04:01:28] 2025-12-02 03:00:53,028 | INFO     | chi2: 33.70533973363829
[2025-12-02 04:01:28] 2025-12-02 03:00:53,030 | INFO     | sum of square deviations: 484007751603.32404
[2025-12-02 04:01:28] 2025-12-02 03:00:53,067 | INFO     | sum of deviations: 4722999814879.99
[2025-12-02 04:01:28] 2025-12-02 03:00:53,067 | INFO     | mean x: 1764608667.524138
[2025-12-02 04:01:28] 2025-12-02 03:00:53,068 | INFO     | mean y: 3309218.268103448
[2025-12-02 04:01:28] 2025-12-02 03:00:53,068 | INFO     | intersect: -17215932379.50405
[2025-12-02 04:01:28] 2025-12-02 03:00:53,069 | INFO     | chi2: 30.469625005176717
[2025-12-02 04:01:28] 2025-12-02 03:00:53,069 | INFO     | current chi2=30.469625005176717 (change=9.600006272099062 %)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,070 | INFO     | right removable region: 1159
[2025-12-02 04:01:28] 2025-12-02 03:00:53,071 | INFO     | sum of square deviations: 484007026923.32416
[2025-12-02 04:01:28] 2025-12-02 03:00:53,117 | INFO     | sum of deviations: 3673687554235.695
[2025-12-02 04:01:28] 2025-12-02 03:00:53,117 | INFO     | mean x: 1764608972.524138
[2025-12-02 04:01:28] 2025-12-02 03:00:53,117 | INFO     | mean y: 3312166.546551724
[2025-12-02 04:01:28] 2025-12-02 03:00:53,117 | INFO     | intersect: -13390340528.255196
[2025-12-02 04:01:28] 2025-12-02 03:00:53,119 | INFO     | chi2: 28.23667246702413
[2025-12-02 04:01:28] 2025-12-02 03:00:53,119 | INFO     | current chi2=28.23667246702413 (change=16.224928482641502 %)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,119 | INFO     | left removable region: 10
[2025-12-02 04:01:28] 2025-12-02 03:00:53,121 | INFO     | sum of square deviations: 470368071559.67633
[2025-12-02 04:01:28] 2025-12-02 03:00:53,162 | INFO     | sum of deviations: 3672665170035.058
[2025-12-02 04:01:28] 2025-12-02 03:00:53,162 | INFO     | mean x: 1764608942.0339425
[2025-12-02 04:01:28] 2025-12-02 03:00:53,162 | INFO     | mean y: 3340433.2036553524
[2025-12-02 04:01:28] 2025-12-02 03:00:53,163 | INFO     | intersect: -13774843486.999445
[2025-12-02 04:01:28] 2025-12-02 03:00:53,164 | INFO     | chi2: 18.890616501483418
[2025-12-02 04:01:28] 2025-12-02 03:00:53,164 | INFO     | current memory leak: 7.81 B/s (using 1149 data points, chi2=18.89)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | could have reported an average CPU frequency of 1999 MHz (40 samples)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | ..............................
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | . Timing measurements:
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | . get job = 0 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | . initial setup = 9 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | . payload setup = 331 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,166 | INFO     | . stage-in = 0 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,167 | INFO     | . payload execution = 71245 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,167 | INFO     | . stage-out = 3 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,167 | INFO     | . log creation = 1 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,167 | INFO     | ..............................
[2025-12-02 04:01:28] 2025-12-02 03:00:53,394 | INFO     | 
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | job summary report
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | --------------------------------------------------
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | PanDA job id: 6897912160
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | task id: 47538121
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | errors: (none)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | pilot state: finished 
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | transexitcode: 0
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | exeerrorcode: 0
[2025-12-02 04:01:28] 2025-12-02 03:00:53,395 | INFO     | exeerrordiag: 
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | exitcode: 0
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | exitmsg: OK
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | cpuconsumptiontime: 263899 s
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | nevents: 1000
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | neventsw: 0
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | pid: 6818
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | pgrp: 6818
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | corecount: 8
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | event service: False
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | sizes: {0: 2284224, 1: 2284479, 2: 2284507, 12: 2284507, 23: 2284535, 34: 2284563, 45: 2284719, 55: 2284747, 66: 2284775, 77: 2284803, 88: 2284859, 98: 2285167, 10
[2025-12-02 04:01:28] 2025-12-02 03:00:53,396 | INFO     | --------------------------------------------------
[2025-12-02 04:01:28] 2025-12-02 03:00:53,397 | INFO     | 
[2025-12-02 04:01:28] 2025-12-02 03:00:53,397 | INFO     | executing command: ls -lF /var/lib/boinc/slots/6
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,789 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,790 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 04:01:28] 2025-12-02 03:00:53,791 | INFO     | job 6897912160 has completed (purged errors)
[2025-12-02 04:01:28] 2025-12-02 03:00:53,791 | INFO     | overall cleanup function is called
[2025-12-02 04:01:28] 2025-12-02 03:00:54,815 | INFO     | --- collectZombieJob: --- 10, [6818]
[2025-12-02 04:01:28] 2025-12-02 03:00:54,816 | INFO     | zombie collector waiting for pid 6818
[2025-12-02 04:01:28] 2025-12-02 03:00:54,816 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 04:01:28] 2025-12-02 03:00:54,816 | INFO     | collected zombie processes
[2025-12-02 04:01:28] 2025-12-02 03:00:54,816 | INFO     | will attempt to kill all subprocesses of pid=6818
[2025-12-02 04:01:28] 2025-12-02 03:00:54,942 | INFO     | process IDs to be killed: [6818] (in reverse order)
[2025-12-02 04:01:28] 2025-12-02 03:00:55,790 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 04:01:28] 2025-12-02 03:00:55,791 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 04:01:28] 2025-12-02 03:00:55,794 | INFO     | did not find any defunct processes belonging to 6818
[2025-12-02 04:01:28] 2025-12-02 03:00:55,796 | INFO     | did not find any defunct processes belonging to 6818
[2025-12-02 04:01:28] 2025-12-02 03:00:55,850 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 04:01:28] 2025-12-02 03:00:55,850 | INFO     | ready for new job
[2025-12-02 04:01:28] 2025-12-02 03:00:55,850 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 04:01:28] 2025-12-02 03:00:55,855 | INFO     | ***************************************
[2025-12-02 04:01:28] 2025-12-02 03:00:55,855 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 04:01:28] 2025-12-02 03:00:55,855 | INFO     | ***************************************
[2025-12-02 04:01:28] 2025-12-02 03:00:55,855 | INFO     | 
[2025-12-02 04:01:28] 2025-12-02 03:00:55,856 | INFO     | pilot is running in a VM
[2025-12-02 04:01:28] 2025-12-02 03:00:55,856 | INFO     | architecture information:
[2025-12-02 04:01:28] 2025-12-02 03:00:55,863 | INFO     | executing command: cat /etc/os-release
[2025-12-02 04:01:28] 2025-12-02 03:00:56,059 | INFO     | cat /etc/os-release:
[2025-12-02 04:01:28] NAME="CentOS Linux"
[2025-12-02 04:01:28] VERSION="7 (Core)"
[2025-12-02 04:01:28] ID="centos"
[2025-12-02 04:01:28] ID_LIKE="rhel fedora"
[2025-12-02 04:01:28] VERSION_ID="7"
[2025-12-02 04:01:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 04:01:28] ANSI_COLOR="0;31"
[2025-12-02 04:01:28] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 04:01:28] HOME_URL="https://www.centos.org/"
[2025-12-02 04:01:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 04:01:28] 
[2025-12-02 04:01:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 04:01:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 04:01:28] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 04:01:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 04:01:28] 
[2025-12-02 04:01:28] 2025-12-02 03:00:56,059 | INFO     | ***************************************
[2025-12-02 04:01:28] 2025-12-02 03:00:56,563 | INFO     | executing command: df -mP /var/lib/boinc/slots/6
[2025-12-02 04:01:28] 2025-12-02 03:00:56,780 | INFO     | sufficient remaining disk space (488180285440 B)
[2025-12-02 04:01:28] 2025-12-02 03:00:56,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 04:01:28] 2025-12-02 03:00:56,780 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 04:01:28] 2025-12-02 03:00:56,781 | INFO     | update_server=False
[2025-12-02 04:01:28] 2025-12-02 03:00:56,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 04:01:28] 2025-12-02 03:00:56,781 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 04:01:28] 2025-12-02 03:00:56,784 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 04:01:28] 2025-12-02 03:00:56,785 | INFO     | aborting loop
[2025-12-02 04:01:28] 2025-12-02 03:00:57,500 | INFO     | all job control threads have been joined
[2025-12-02 04:01:28] 2025-12-02 03:00:57,513 | INFO     | all data control threads have been joined
[2025-12-02 04:01:28] 2025-12-02 03:00:57,616 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 04:01:28] 2025-12-02 03:00:57,786 | INFO     | [job] retrieve thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:57,791 | INFO     | [job] job monitor thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:57,928 | INFO     | [payload] failed_post thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,124 | INFO     | [job] validate thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,190 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,199 | INFO     | all payload control threads have been joined
[2025-12-02 04:01:28] 2025-12-02 03:00:58,310 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 04:01:28] 2025-12-02 03:00:58,331 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,502 | INFO     | [data] copytool_in thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,506 | INFO     | [job] control thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,519 | INFO     | [data] control thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,891 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:58,986 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:59,144 | INFO     | [payload] validate_post thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:59,205 | INFO     | [payload] control thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:59,316 | INFO     | [job] queue monitor thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:00:59,623 | INFO     | [data] copytool_out thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:01:00,790 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 04:01:28] 2025-12-02 03:01:06,540 | INFO     | [monitor] cgroup control has ended
[2025-12-02 04:01:28] 2025-12-02 03:01:06,580 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140663097845568)>', '<ExcThread(monitor, started 140662494181120)>']
[2025-12-02 04:01:28] 2025-12-02 03:01:11,606 | INFO     | all workflow threads have been joined
[2025-12-02 04:01:28] 2025-12-02 03:01:11,607 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 04:01:28] 2025-12-02 03:01:11,607 | INFO     | traces error code: 0
[2025-12-02 04:01:28] 2025-12-02 03:01:11,607 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 04:01:28] 2025-12-02 03:01:25,562 | INFO     | PID=31946 has CPU usage=1.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | INFO     | .. there are 9 such processes running
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 04:01:28] 2025-12-02 03:01:25,563 | INFO     | [monitor] control thread has ended
[2025-12-02 04:01:28] 2025-12-02 03:01:25,872 [wrapper] ==== pilot stdout END ====
[2025-12-02 04:01:28] 2025-12-02 03:01:25,937 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 04:01:28] 2025-12-02 03:01:26,054 [wrapper] pilotpid: 31946
[2025-12-02 04:01:28] 2025-12-02 03:01:26,137 [wrapper] Pilot exit status: 0
[2025-12-02 04:01:28] 2025-12-02 03:01:26,496 [wrapper] pandaids: 6897912160
[2025-12-02 04:01:28] 2025-12-02 03:01:27,448 [wrapper] cleanup supervisor_pilot 24703 31947
[2025-12-02 04:01:28] 2025-12-02 03:01:27,483 [wrapper] Test setup, not cleaning
[2025-12-02 04:01:28] 2025-12-02 03:01:27,563 [wrapper] apfmon messages muted
[2025-12-02 04:01:28] 2025-12-02 03:01:27,649 [wrapper] ==== wrapper stdout END ====
[2025-12-02 04:01:28] 2025-12-02 03:01:27,678 [wrapper] ==== wrapper stderr END ====
[2025-12-02 04:01:28]  *** Error codes and diagnostics ***
[2025-12-02 04:01:28]     "exeErrorCode": 0,
[2025-12-02 04:01:28]     "exeErrorDiag": "",
[2025-12-02 04:01:28]     "pilotErrorCode": 0,
[2025-12-02 04:01:28]     "pilotErrorDiag": "",
[2025-12-02 04:01:28]  *** Listing of results directory ***
[2025-12-02 04:01:28] total 1069288
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc    576529 Nov 28 23:41 pilot3.tar.gz
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc      5112 Nov 28 23:43 queuedata.json
[2025-12-02 04:01:28] -rwx------. 1 boinc boinc     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc       100 Dec  1 07:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 04:01:28] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 07:58 run_atlas
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc       105 Dec  1 07:58 job.xml
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc      6391 Dec  1 07:58 init_data.xml
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc 376136199 Dec  1 07:58 EVNT.47528880._000035.pool.root.1
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc     15847 Dec  1 07:58 start_atlas.sh
[2025-12-02 04:01:28] drwxrwx--x. 2 boinc boinc        68 Dec  1 07:58 shared
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc    590132 Dec  1 07:58 input.tar.gz
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc         0 Dec  1 07:58 boinc_lockfile
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc      2880 Dec  1 07:59 pandaJob.out
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc    992513 Dec  1 08:02 agis_schedconf.cvmfs.json
[2025-12-02 04:01:28] drwx------. 5 boinc boinc      4096 Dec  1 08:03 pilot3
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc       533 Dec  2 03:39 boinc_task_state.xml
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc 691210244 Dec  2 03:58 HITS.47538121._000345.pool.root.1
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc      1028 Dec  2 03:59 memory_monitor_summary.json
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc   1516240 Dec  2 03:59 agis_ddmendpoints.agis.ALL.json
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc   2376168 Dec  2 03:59 log.47538121._000345.job.log.tgz.1
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc        95 Dec  2 04:00 pilot_heartbeat.json
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc     27814 Dec  2 04:00 heartbeat.json
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc        29 Dec  2 04:00 wrapper_checkpoint.txt
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc      8192 Dec  2 04:00 boinc_mmap_file
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc       820 Dec  2 04:01 pilotlog.txt
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc   9456470 Dec  2 04:01 log.47538121._000345.job.log.1
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc       353 Dec  2 04:01 output.list
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc       620 Dec  2 04:01 runtime_log
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc  11868160 Dec  2 04:01 result.tar.gz
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc      8817 Dec  2 04:01 runtime_log.err
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc       661 Dec  2 04:01 CysMDm6MMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlVLKDmSbqkcn.diag
[2025-12-02 04:01:28] -rw-r--r--. 1 boinc boinc     21441 Dec  2 04:01 stderr.txt
[2025-12-02 04:01:28] HITS file was successfully produced:
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc 691210244 Dec  2 03:58 shared/HITS.pool.root.1
[2025-12-02 04:01:28]  *** Contents of shared directory: ***
[2025-12-02 04:01:28] total 1054524
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc 376136199 Dec  1 07:58 ATLAS.root_0
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc     15847 Dec  1 07:58 start_atlas.sh
[2025-12-02 04:01:28] -rw-r--r--. 2 boinc boinc    590132 Dec  1 07:58 input.tar.gz
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc 691210244 Dec  2 03:58 HITS.pool.root.1
[2025-12-02 04:01:28] -rw-------. 1 boinc boinc  11868160 Dec  2 04:01 result.tar.gz
04:01:29 (28154): run_atlas exited; CPU time 264298.162531
04:01:29 (28154): called boinc_finish(0)

</stderr_txt>
]]>

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