Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
03:01:03 (19260): wrapper (7.7.26015): starting
03:01:03 (19260): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 03:01:03] Arguments: --nthreads 8
[2025-11-30 03:01:03] Threads: 8
[2025-11-30 03:01:03] Checking for CVMFS
[2025-11-30 03:01:03] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 03:01:03] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 03:01:03] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 03:01:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 03:01:03] 2.11.0.0 4447 70660 78616 153463 0 75 2583514 4096000 2301 130560 14 3529053 99.454 4791915 516 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-30 03:01:03] CVMFS is ok
[2025-11-30 03:01:03] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 03:01:03] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 03:01:03] Further information can be found at the LHC@home message board.
[2025-11-30 03:01:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 03:01:03] Checking for apptainer binary...
[2025-11-30 03:01:03] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-30 03:01:03] apptainer is not installed, using version from CVMFS
[2025-11-30 03:01:03] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 03:01:03] WARNING: Environment variable TMPDIR already has value [/tmp/job_10935416/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node347
[2025-11-30 03:01:03] apptainer works
[2025-11-30 03:01:03] Set ATHENA_PROC_NUMBER=8
[2025-11-30 03:01:03] Set ATHENA_CORE_NUMBER=8
[2025-11-30 03:01:03] Starting ATLAS job with PandaID=6897951725
[2025-11-30 03:01:03] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10935416/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 06:58:37]  *** The last 200 lines of the pilot log: ***
[2025-11-30 06:58:37] 2025-11-30 05:57:49,930 | INFO     | monitor loop #1030: job 0:6897951725 is in state 'finished'
[2025-11-30 06:58:37] 2025-11-30 05:57:49,930 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:58:37] 2025-11-30 05:57:49,962 | INFO     | time since job start (14201s) is within the limit (172800.0s)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,453 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 06:58:37] 2025-11-30 05:57:51,470 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2505.1910312500004
[2025-11-30 06:58:37] 2025-11-30 05:57:51,476 | INFO     | using path: /tmp/job_10935416/atlas/pilot/slots/0/PanDA_Pilot-6897951725/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,476 | INFO     | extracted standard info from prmon json
[2025-11-30 06:58:37] 2025-11-30 05:57:51,476 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 06:58:37] 2025-11-30 05:57:51,476 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 06:58:37] 2025-11-30 05:57:51,478 | INFO     | fitting pss+swap vs Time
[2025-11-30 06:58:37] 2025-11-30 05:57:51,479 | INFO     | sum of square deviations: 3922276332.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,479 | INFO     | sum of deviations: 220154644818.00006
[2025-11-30 06:58:37] 2025-11-30 05:57:51,479 | INFO     | mean x: 1764475164.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,479 | INFO     | mean y: 3440424.948497854
[2025-11-30 06:58:37] 2025-11-30 05:57:51,479 | INFO     | intersect: -99035324348.29349
[2025-11-30 06:58:37] 2025-11-30 05:57:51,480 | INFO     | chi2: 4.138758034016347
[2025-11-30 06:58:37] 2025-11-30 05:57:51,480 | INFO     | sum of square deviations: 3675146117.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | sum of deviations: 269772002972.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | mean x: 1764475011.5
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | mean y: 3470709.201754386
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | intersect: -129516810360.59106
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | chi2: 2.3895749151021173
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | current chi2=2.3895749151021173 (change=42.26347867011645 %)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,481 | INFO     | sum of square deviations: 3438620752.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | sum of deviations: 243890612116.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | mean x: 1764474859.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | mean y: 3454020.2107623317
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | intersect: -125145227518.60257
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | chi2: 2.356829456821763
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | current chi2=2.356829456821763 (change=1.3703465864745654 %)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | right removable region: 222
[2025-11-30 06:58:37] 2025-11-30 05:57:51,482 | INFO     | sum of square deviations: 3675146117.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,483 | INFO     | sum of deviations: 150068864093.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,483 | INFO     | mean x: 1764475316.5
[2025-11-30 06:58:37] 2025-11-30 05:57:51,483 | INFO     | mean y: 3483382.701754386
[2025-11-30 06:58:37] 2025-11-30 05:57:51,483 | INFO     | intersect: -72046116289.66188
[2025-11-30 06:58:37] 2025-11-30 05:57:51,483 | INFO     | chi2: 2.047611748499868
[2025-11-30 06:58:37] 2025-11-30 05:57:51,484 | INFO     | current chi2=2.047611748499868 (change=50.52593720940922 %)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,484 | INFO     | sum of square deviations: 3438620752.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,484 | INFO     | sum of deviations: 135844452579.00003
[2025-11-30 06:58:37] 2025-11-30 05:57:51,484 | INFO     | mean x: 1764475469.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,484 | INFO     | mean y: 3492542.1345291478
[2025-11-30 06:58:37] 2025-11-30 05:57:51,485 | INFO     | intersect: -69703003597.62334
[2025-11-30 06:58:37] 2025-11-30 05:57:51,485 | INFO     | chi2: 2.0440417491864338
[2025-11-30 06:58:37] 2025-11-30 05:57:51,485 | INFO     | current chi2=2.0440417491864338 (change=0.17434942518032784 %)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,485 | INFO     | left removable region: 20
[2025-11-30 06:58:37] 2025-11-30 05:57:51,485 | INFO     | sum of square deviations: 2555770710.5
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | sum of deviations: 136819103320.0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | mean x: 1764475438.5
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | mean y: 3521859.9306930695
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | intersect: -94454852803.30528
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | chi2: 0.1883100932868737
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | current memory leak: 53.53 B/s (using 202 data points, chi2=0.19)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | could have reported an average CPU frequency of 2785 MHz (11 samples)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | ..............................
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . Timing measurements:
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . get job = 0 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . initial setup = 1 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . payload setup = 4 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . stage-in = 0 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . payload execution = 14178 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . stage-out = 1 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | . log creation = 0 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,486 | INFO     | ..............................
[2025-11-30 06:58:37] 2025-11-30 05:57:51,535 | INFO     | 
[2025-11-30 06:58:37] 2025-11-30 05:57:51,535 | INFO     | job summary report
[2025-11-30 06:58:37] 2025-11-30 05:57:51,535 | INFO     | --------------------------------------------------
[2025-11-30 06:58:37] 2025-11-30 05:57:51,535 | INFO     | PanDA job id: 6897951725
[2025-11-30 06:58:37] 2025-11-30 05:57:51,535 | INFO     | task id: 47531111
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | errors: (none)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | pilot state: finished 
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | transexitcode: 0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | exeerrorcode: 0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | exeerrordiag: 
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | exitcode: 0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | exitmsg: OK
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | cpuconsumptiontime: 107494 s
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | nevents: 1000
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | neventsw: 0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | pid: 1473
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | pgrp: 1473
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | corecount: 8
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | event service: False
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | sizes: {0: 2284570, 2: 2284832, 11: 2284860, 14186: 2335049, 14187: 2344073, 14188: 2344129, 14191: 2344503}
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | --------------------------------------------------
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | 
[2025-11-30 06:58:37] 2025-11-30 05:57:51,536 | INFO     | executing command: ls -lF /tmp/job_10935416/atlas/pilot/slots/0
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,545 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | job 6897951725 has completed (purged errors)
[2025-11-30 06:58:37] 2025-11-30 05:57:51,546 | INFO     | overall cleanup function is called
[2025-11-30 06:58:37] 2025-11-30 05:57:52,554 | INFO     | --- collectZombieJob: --- 10, [1473]
[2025-11-30 06:58:37] 2025-11-30 05:57:52,554 | INFO     | zombie collector waiting for pid 1473
[2025-11-30 06:58:37] 2025-11-30 05:57:52,554 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 06:58:37] 2025-11-30 05:57:52,554 | INFO     | collected zombie processes
[2025-11-30 06:58:37] 2025-11-30 05:57:52,554 | INFO     | will attempt to kill all subprocesses of pid=1473
[2025-11-30 06:58:37] 2025-11-30 05:57:52,652 | INFO     | process IDs to be killed: [1473] (in reverse order)
[2025-11-30 06:58:37] 2025-11-30 05:57:52,688 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 06:58:37] 2025-11-30 05:57:52,688 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 06:58:37] 2025-11-30 05:57:52,691 | INFO     | did not find any defunct processes belonging to 1473
[2025-11-30 06:58:37] 2025-11-30 05:57:52,694 | INFO     | did not find any defunct processes belonging to 1473
[2025-11-30 06:58:37] 2025-11-30 05:57:52,695 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 06:58:37] 2025-11-30 05:57:52,695 | INFO     | ready for new job
[2025-11-30 06:58:37] 2025-11-30 05:57:52,695 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 06:58:37] 2025-11-30 05:57:52,696 | INFO     | ***************************************
[2025-11-30 06:58:37] 2025-11-30 05:57:52,696 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 06:58:37] 2025-11-30 05:57:52,696 | INFO     | ***************************************
[2025-11-30 06:58:37] 2025-11-30 05:57:52,696 | INFO     | 
[2025-11-30 06:58:37] 2025-11-30 05:57:52,709 | INFO     | architecture information:
[2025-11-30 06:58:37] 2025-11-30 05:57:52,709 | INFO     | executing command: cat /etc/os-release
[2025-11-30 06:58:37] 2025-11-30 05:57:52,716 | INFO     | cat /etc/os-release:
[2025-11-30 06:58:37] NAME="CentOS Linux"
[2025-11-30 06:58:37] VERSION="7 (Core)"
[2025-11-30 06:58:37] ID="centos"
[2025-11-30 06:58:37] ID_LIKE="rhel fedora"
[2025-11-30 06:58:37] VERSION_ID="7"
[2025-11-30 06:58:37] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 06:58:37] ANSI_COLOR="0;31"
[2025-11-30 06:58:37] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 06:58:37] HOME_URL="https://www.centos.org/"
[2025-11-30 06:58:37] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 06:58:37] 
[2025-11-30 06:58:37] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 06:58:37] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 06:58:37] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 06:58:37] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 06:58:37] 
[2025-11-30 06:58:37] 2025-11-30 05:57:52,716 | INFO     | ***************************************
[2025-11-30 06:58:37] 2025-11-30 05:57:53,219 | INFO     | executing command: df -mP /tmp/job_10935416/atlas/pilot/slots/0
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | INFO     | sufficient remaining disk space (224379535360 B)
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | INFO     | update_server=False
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 06:58:37] 2025-11-30 05:57:53,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:58:37] 2025-11-30 05:57:53,438 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:58:37] 2025-11-30 05:57:53,438 | INFO     | aborting loop
[2025-11-30 06:58:37] 2025-11-30 05:57:53,748 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 06:58:37] 2025-11-30 05:57:53,792 | INFO     | all data control threads have been joined
[2025-11-30 06:58:37] 2025-11-30 05:57:54,054 | INFO     | all payload control threads have been joined
[2025-11-30 06:58:37] 2025-11-30 05:57:54,231 | INFO     | [job] retrieve thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,232 | INFO     | [job] queue monitor thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,294 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 06:58:37] 2025-11-30 05:57:54,329 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,443 | INFO     | [job] job monitor thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,470 | INFO     | all job control threads have been joined
[2025-11-30 06:58:37] 2025-11-30 05:57:54,498 | INFO     | [payload] validate_post thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,593 | INFO     | [job] validate thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,611 | INFO     | [payload] failed_post thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,759 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,797 | INFO     | [data] control thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:54,818 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:55,059 | INFO     | [payload] control thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:55,217 | INFO     | [data] copytool_in thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:55,475 | INFO     | [job] control thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:55,549 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:55,753 | INFO     | [data] copytool_out thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:57:58,299 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 06:58:37] 2025-11-30 05:58:23,151 | INFO     | PID=24096 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 06:58:37] 2025-11-30 05:58:23,152 | INFO     | .. there are 3 such processes running
[2025-11-30 06:58:37] 2025-11-30 05:58:23,152 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 06:58:37] 2025-11-30 05:58:23,152 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 06:58:37] 2025-11-30 05:58:23,152 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 06:58:37] 2025-11-30 05:58:31,727 | INFO     | [monitor] cgroup control has ended
[2025-11-30 06:58:37] 2025-11-30 05:58:31,827 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-11-30 06:58:37] 2025-11-30 05:58:32,197 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 06:58:37] 2025-11-30 05:58:32,197 | INFO     | [monitor] control thread has ended
[2025-11-30 06:58:37] 2025-11-30 05:58:36,852 | INFO     | all workflow threads have been joined
[2025-11-30 06:58:37] 2025-11-30 05:58:36,852 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 06:58:37] 2025-11-30 05:58:36,853 | INFO     | traces error code: 0
[2025-11-30 06:58:37] 2025-11-30 05:58:36,853 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 06:58:37] 2025-11-30 05:58:36,904 [wrapper] ==== pilot stdout END ====
[2025-11-30 06:58:37] 2025-11-30 05:58:36,905 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 06:58:37] 2025-11-30 05:58:36,907 [wrapper] pilotpid: 24096
[2025-11-30 06:58:37] 2025-11-30 05:58:36,908 [wrapper] Pilot exit status: 0
[2025-11-30 06:58:37] 2025-11-30 05:58:36,913 [wrapper] pandaids: 6897951725
[2025-11-30 06:58:37] 2025-11-30 05:58:36,934 [wrapper] cleanup supervisor_pilot 10155 24097
[2025-11-30 06:58:37] 2025-11-30 05:58:36,936 [wrapper] Test setup, not cleaning
[2025-11-30 06:58:37] 2025-11-30 05:58:36,937 [wrapper] apfmon messages muted
[2025-11-30 06:58:37] 2025-11-30 05:58:36,938 [wrapper] ==== wrapper stdout END ====
[2025-11-30 06:58:37] 2025-11-30 05:58:36,940 [wrapper] ==== wrapper stderr END ====
[2025-11-30 06:58:37]  *** Error codes and diagnostics ***
[2025-11-30 06:58:37]     "exeErrorCode": 0,
[2025-11-30 06:58:37]     "exeErrorDiag": "",
[2025-11-30 06:58:37]     "pilotErrorCode": 0,
[2025-11-30 06:58:37]     "pilotErrorDiag": "",
[2025-11-30 06:58:37]  *** Listing of results directory ***
[2025-11-30 06:58:37] total 1072812
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user    576529 Nov 28 23:41 pilot3.tar.gz
[2025-11-30 06:58:37] -rwx------ 1 mf493845 unix-user     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      5112 Nov 28 23:43 queuedata.json
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user       100 Nov 30 01:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 06:58:37] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 30 01:24 run_atlas
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user       105 Nov 30 01:24 job.xml
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user 380039962 Nov 30 03:01 EVNT.47531104._000034.pool.root.1
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 03:01 start_atlas.sh
[2025-11-30 06:58:37] drwxrwx--x 2 mf493845 unix-user       100 Nov 30 03:01 shared
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user    590122 Nov 30 03:01 input.tar.gz
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      6391 Nov 30 03:01 init_data.xml
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user         0 Nov 30 03:01 boinc_setup_complete
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      8192 Nov 30 03:01 boinc_mmap_file
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user         0 Nov 30 03:01 boinc_lockfile
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      2876 Nov 30 03:01 pandaJob.out
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user    991828 Nov 30 03:01 agis_schedconf.cvmfs.json
[2025-11-30 06:58:37] drwx------ 5 mf493845 unix-user       440 Nov 30 03:01 pilot3
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user 707211047 Nov 30 06:57 HITS.47531111._000261.pool.root.1
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      1030 Nov 30 06:57 memory_monitor_summary.json
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user        95 Nov 30 06:57 pilot_heartbeat.json
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user   1516240 Nov 30 06:57 agis_ddmendpoints.agis.ALL.json
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user   1647713 Nov 30 06:57 log.47531111._000261.job.log.tgz.1
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user     27244 Nov 30 06:57 heartbeat.json
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      4835 Nov 30 06:58 pilotlog.txt
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user   2044644 Nov 30 06:58 log.47531111._000261.job.log.1
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user       353 Nov 30 06:58 output.list
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user       620 Nov 30 06:58 runtime_log
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user   3727360 Nov 30 06:58 result.tar.gz
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user      9221 Nov 30 06:58 runtime_log.err
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user       650 Nov 30 06:58 5JWMDmmMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlTLKDmPAgMlm.diag
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user     21698 Nov 30 06:58 stderr.txt
[2025-11-30 06:58:37] HITS file was successfully produced:
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user 707211047 Nov 30 06:57 shared/HITS.pool.root.1
[2025-11-30 06:58:37]  *** Contents of shared directory: ***
[2025-11-30 06:58:37] total 1066008
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user 380039962 Nov 30 03:01 ATLAS.root_0
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 03:01 start_atlas.sh
[2025-11-30 06:58:37] -rw-r--r-- 2 mf493845 unix-user    590122 Nov 30 03:01 input.tar.gz
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user 707211047 Nov 30 06:57 HITS.pool.root.1
[2025-11-30 06:58:37] -rw------- 1 mf493845 unix-user   3727360 Nov 30 06:58 result.tar.gz
06:58:38 (19260): run_atlas exited; CPU time 107650.662472
06:58:38 (19260): called boinc_finish(0)

</stderr_txt>
]]>

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