Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
22:04:11 (26712): wrapper (7.7.26015): starting
22:04:11 (26712): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 22:04:11] Arguments: --nthreads 8
[2025-12-01 22:04:11] Threads: 8
[2025-12-01 22:04:11] Checking for CVMFS
[2025-12-01 22:04:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 22:04:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 22:04:11] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 22:04:12] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 22:04:12] 2.11.2.0 11529 230247 145944 153531 0 376 17621403 25165825 2191 130560 9 95914917 99.892 43169503 2402 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 22:04:12] CVMFS is ok
[2025-12-01 22:04:12] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 22:04:12] Checking for apptainer binary...
[2025-12-01 22:04:12] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 22:04:12] Running /usr/bin/apptainer --version
[2025-12-01 22:04:12] apptainer version 1.3.2-1.el7
[2025-12-01 22:04:12] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 22:04:13] cg-vwn354.simple-grid.lan
[2025-12-01 22:04:13] apptainer works
[2025-12-01 22:04:13] Set ATHENA_PROC_NUMBER=8
[2025-12-01 22:04:13] Set ATHENA_CORE_NUMBER=8
[2025-12-01 22:04:13] Starting ATLAS job with PandaID=6893848637
[2025-12-01 22:04:13] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/7 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 21:32:09]  *** The last 200 lines of the pilot log: ***
[2025-12-02 21:32:09] 2025-12-02 20:31:04,577 | INFO     | time since job start (84392s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:05,417 | INFO     | monitor loop #5616: job 0:6893848637 is in state 'finished'
[2025-12-02 21:32:09] 2025-12-02 20:31:05,417 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:32:09] 2025-12-02 20:31:06,587 | INFO     | time since job start (84394s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:07,841 | INFO     | PID=30929 has CPU usage=0.9% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 21:32:09] 2025-12-02 20:31:07,841 | INFO     | .. there are 9 such processes running
[2025-12-02 21:32:09] 2025-12-02 20:31:07,929 | INFO     | monitor loop #5617: job 0:6893848637 is in state 'finished'
[2025-12-02 21:32:09] 2025-12-02 20:31:07,929 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:32:09] 2025-12-02 20:31:08,842 | INFO     | time since job start (84396s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:10,439 | INFO     | monitor loop #5618: job 0:6893848637 is in state 'finished'
[2025-12-02 21:32:09] 2025-12-02 20:31:10,440 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:32:09] 2025-12-02 20:31:10,849 | INFO     | time since job start (84398s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:12,858 | INFO     | time since job start (84400s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:12,945 | INFO     | monitor loop #5619: job 0:6893848637 is in state 'finished'
[2025-12-02 21:32:09] 2025-12-02 20:31:12,946 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 21:32:09] 2025-12-02 20:31:14,866 | INFO     | time since job start (84402s) is within the limit (172800.0s)
[2025-12-02 21:32:09] 2025-12-02 20:31:14,911 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 21:32:09] 2025-12-02 20:31:14,912 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-02 21:32:09] 2025-12-02 20:31:14,914 | INFO     | using path: /var/lib/boinc/slots/7/PanDA_Pilot-6893848637/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 21:32:09] 2025-12-02 20:31:14,914 | INFO     | extracted standard info from prmon json
[2025-12-02 21:32:09] 2025-12-02 20:31:14,915 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 21:32:09] 2025-12-02 20:31:14,915 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 21:32:09] 2025-12-02 20:31:14,943 | INFO     | fitting pss+swap vs Time
[2025-12-02 21:32:09] 2025-12-02 20:31:14,945 | INFO     | sum of square deviations: 816693047521.0338
[2025-12-02 21:32:09] 2025-12-02 20:31:15,009 | INFO     | sum of deviations: 2587730193308.293
[2025-12-02 21:32:09] 2025-12-02 20:31:15,010 | INFO     | mean x: 1764665235.0463433
[2025-12-02 21:32:09] 2025-12-02 20:31:15,010 | INFO     | mean y: 2860623.979724837
[2025-12-02 21:32:09] 2025-12-02 20:31:15,010 | INFO     | intersect: -5588563869.8026705
[2025-12-02 21:32:09] 2025-12-02 20:31:15,012 | INFO     | chi2: 13.631145292253054
[2025-12-02 21:32:09] 2025-12-02 20:31:15,014 | INFO     | sum of square deviations: 807854885310.5392
[2025-12-02 21:32:09] 2025-12-02 20:31:15,078 | INFO     | sum of deviations: 3034084972884.1694
[2025-12-02 21:32:09] 2025-12-02 20:31:15,079 | INFO     | mean x: 1764665082.5501454
[2025-12-02 21:32:09] 2025-12-02 20:31:15,079 | INFO     | mean y: 2868326.635174419
[2025-12-02 21:32:09] 2025-12-02 20:31:15,079 | INFO     | intersect: -6624737579.443697
[2025-12-02 21:32:09] 2025-12-02 20:31:15,081 | INFO     | chi2: 10.583624538423498
[2025-12-02 21:32:09] 2025-12-02 20:31:15,081 | INFO     | current chi2=10.583624538423498 (change=22.35704108855434 %)
[2025-12-02 21:32:09] 2025-12-02 20:31:15,081 | INFO     | right removable region: 1375
[2025-12-02 21:32:09] 2025-12-02 20:31:15,083 | INFO     | sum of square deviations: 807854003860.5391
[2025-12-02 21:32:09] 2025-12-02 20:31:15,147 | INFO     | sum of deviations: 2174994958968.6172
[2025-12-02 21:32:09] 2025-12-02 20:31:15,148 | INFO     | mean x: 1764665387.5501454
[2025-12-02 21:32:09] 2025-12-02 20:31:15,148 | INFO     | mean y: 2867741.6504360465
[2025-12-02 21:32:09] 2025-12-02 20:31:15,148 | INFO     | intersect: -4748161904.605486
[2025-12-02 21:32:09] 2025-12-02 20:31:15,150 | INFO     | chi2: 11.291645374279065
[2025-12-02 21:32:09] 2025-12-02 20:31:15,150 | INFO     | current chi2=11.291645374279065 (change=17.16290060603777 %)
[2025-12-02 21:32:09] 2025-12-02 20:31:15,150 | INFO     | left removable region: 10
[2025-12-02 21:32:09] 2025-12-02 20:31:15,152 | INFO     | sum of square deviations: 788634540178.8787
[2025-12-02 21:32:09] 2025-12-02 20:31:15,233 | INFO     | sum of deviations: 2639353846303.12
[2025-12-02 21:32:09] 2025-12-02 20:31:15,234 | INFO     | mean x: 1764665357.054945
[2025-12-02 21:32:09] 2025-12-02 20:31:15,234 | INFO     | mean y: 2879168.1450549453
[2025-12-02 21:32:09] 2025-12-02 20:31:15,234 | INFO     | intersect: -5902994922.183785
[2025-12-02 21:32:09] 2025-12-02 20:31:15,236 | INFO     | chi2: 7.2276419947921395
[2025-12-02 21:32:09] 2025-12-02 20:31:15,236 | INFO     | current memory leak: 3.35 B/s (using 1365 data points, chi2=7.23)
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | ..............................
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | . Timing measurements:
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | . get job = 0 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | . initial setup = 2 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | . payload setup = 16 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,238 | INFO     | . stage-in = 0 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,239 | INFO     | . payload execution = 84260 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,239 | INFO     | . stage-out = 5 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,239 | INFO     | . log creation = 2 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,239 | INFO     | ..............................
[2025-12-02 21:32:09] 2025-12-02 20:31:15,415 | INFO     | 
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | job summary report
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | --------------------------------------------------
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | PanDA job id: 6893848637
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | task id: 47523449
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | errors: (none)
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | pilot state: finished 
[2025-12-02 21:32:09] 2025-12-02 20:31:15,416 | INFO     | transexitcode: 0
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | exeerrorcode: 0
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | exeerrordiag: 
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | exitcode: 0
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | exitmsg: OK
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | cpuconsumptiontime: 320694 s
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | nevents: 1000
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | neventsw: 0
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | pid: 10697
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | pgrp: 10697
[2025-12-02 21:32:09] 2025-12-02 20:31:15,417 | INFO     | corecount: 8
[2025-12-02 21:32:09] 2025-12-02 20:31:15,418 | INFO     | event service: False
[2025-12-02 21:32:09] 2025-12-02 20:31:15,418 | INFO     | sizes: {0: 2284144, 1: 2284343, 2: 2284343, 10: 2284633, 12: 2284661, 84280: 2345381, 84286: 2354431, 84372: 2354621}
[2025-12-02 21:32:09] 2025-12-02 20:31:15,418 | INFO     | --------------------------------------------------
[2025-12-02 21:32:09] 2025-12-02 20:31:15,418 | INFO     | 
[2025-12-02 21:32:09] 2025-12-02 20:31:15,418 | INFO     | executing command: ls -lF /var/lib/boinc/slots/7
[2025-12-02 21:32:09] 2025-12-02 20:31:16,019 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,019 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,019 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,019 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,020 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,021 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 21:32:09] 2025-12-02 20:31:16,022 | INFO     | job 6893848637 has completed (purged errors)
[2025-12-02 21:32:09] 2025-12-02 20:31:16,022 | INFO     | overall cleanup function is called
[2025-12-02 21:32:09] 2025-12-02 20:31:17,038 | INFO     | --- collectZombieJob: --- 10, [10697]
[2025-12-02 21:32:09] 2025-12-02 20:31:17,039 | INFO     | zombie collector waiting for pid 10697
[2025-12-02 21:32:09] 2025-12-02 20:31:17,039 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 21:32:09] 2025-12-02 20:31:17,039 | INFO     | collected zombie processes
[2025-12-02 21:32:09] 2025-12-02 20:31:17,039 | INFO     | will attempt to kill all subprocesses of pid=10697
[2025-12-02 21:32:09] 2025-12-02 20:31:17,157 | INFO     | process IDs to be killed: [10697] (in reverse order)
[2025-12-02 21:32:09] 2025-12-02 20:31:17,990 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 21:32:09] 2025-12-02 20:31:17,990 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 21:32:09] 2025-12-02 20:31:17,993 | INFO     | did not find any defunct processes belonging to 10697
[2025-12-02 21:32:09] 2025-12-02 20:31:17,996 | INFO     | did not find any defunct processes belonging to 10697
[2025-12-02 21:32:09] 2025-12-02 20:31:18,058 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 21:32:09] 2025-12-02 20:31:18,059 | INFO     | ready for new job
[2025-12-02 21:32:09] 2025-12-02 20:31:18,059 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 21:32:09] 2025-12-02 20:31:18,064 | INFO     | ***************************************
[2025-12-02 21:32:09] 2025-12-02 20:31:18,064 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 21:32:09] 2025-12-02 20:31:18,064 | INFO     | ***************************************
[2025-12-02 21:32:09] 2025-12-02 20:31:18,064 | INFO     | 
[2025-12-02 21:32:09] 2025-12-02 20:31:18,065 | INFO     | pilot is running in a VM
[2025-12-02 21:32:09] 2025-12-02 20:31:18,065 | INFO     | architecture information:
[2025-12-02 21:32:09] 2025-12-02 20:31:18,076 | INFO     | executing command: cat /etc/os-release
[2025-12-02 21:32:09] 2025-12-02 20:31:18,165 | INFO     | cat /etc/os-release:
[2025-12-02 21:32:09] NAME="CentOS Linux"
[2025-12-02 21:32:09] VERSION="7 (Core)"
[2025-12-02 21:32:09] ID="centos"
[2025-12-02 21:32:09] ID_LIKE="rhel fedora"
[2025-12-02 21:32:09] VERSION_ID="7"
[2025-12-02 21:32:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 21:32:09] ANSI_COLOR="0;31"
[2025-12-02 21:32:09] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 21:32:09] HOME_URL="https://www.centos.org/"
[2025-12-02 21:32:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 21:32:09] 
[2025-12-02 21:32:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 21:32:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 21:32:09] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 21:32:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 21:32:09] 
[2025-12-02 21:32:09] 2025-12-02 20:31:18,165 | INFO     | ***************************************
[2025-12-02 21:32:09] 2025-12-02 20:31:18,667 | INFO     | executing command: df -mP /var/lib/boinc/slots/7
[2025-12-02 21:32:09] 2025-12-02 20:31:18,905 | INFO     | sufficient remaining disk space (487793360896 B)
[2025-12-02 21:32:09] 2025-12-02 20:31:18,905 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 21:32:09] 2025-12-02 20:31:18,905 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 21:32:09] 2025-12-02 20:31:18,906 | INFO     | update_server=False
[2025-12-02 21:32:09] 2025-12-02 20:31:18,906 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 21:32:09] 2025-12-02 20:31:18,968 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:32:09] 2025-12-02 20:31:18,968 | INFO     | aborting loop
[2025-12-02 21:32:09] 2025-12-02 20:31:19,267 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 21:32:09] 2025-12-02 20:31:19,683 | INFO     | all payload control threads have been joined
[2025-12-02 21:32:09] 2025-12-02 20:31:19,725 | INFO     | all data control threads have been joined
[2025-12-02 21:32:09] 2025-12-02 20:31:19,767 | INFO     | all job control threads have been joined
[2025-12-02 21:32:09] 2025-12-02 20:31:19,911 | INFO     | [job] retrieve thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:19,974 | INFO     | [job] job monitor thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,159 | INFO     | [job] validate thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,423 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 21:32:09] 2025-12-02 20:31:20,513 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,638 | INFO     | [payload] failed_post thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,689 | INFO     | [payload] control thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,719 | INFO     | [payload] validate_post thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,731 | INFO     | [data] control thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,773 | INFO     | [job] control thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,884 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:20,899 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 21:32:09] 2025-12-02 20:31:20,946 | INFO     | [data] copytool_in thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:21,087 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:21,116 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:21,274 | INFO     | [data] copytool_out thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:21,429 | INFO     | [job] queue monitor thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:24,907 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 21:32:09] 2025-12-02 20:31:48,020 | INFO     | PID=30929 has CPU usage=1.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 21:32:09] 2025-12-02 20:31:48,020 | INFO     | .. there are 9 such processes running
[2025-12-02 21:32:09] 2025-12-02 20:31:48,021 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 21:32:09] 2025-12-02 20:31:48,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 21:32:09] 2025-12-02 20:31:48,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 21:32:09] 2025-12-02 20:31:58,928 | INFO     | [monitor] cgroup control has ended
[2025-12-02 21:32:09] 2025-12-02 20:32:00,581 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140184283133760)>', '<ExcThread(monitor, started 140183706007296)>']
[2025-12-02 21:32:09] 2025-12-02 20:32:01,097 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 21:32:09] 2025-12-02 20:32:01,097 | INFO     | [monitor] control thread has ended
[2025-12-02 21:32:09] 2025-12-02 20:32:05,607 | INFO     | all workflow threads have been joined
[2025-12-02 21:32:09] 2025-12-02 20:32:05,608 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 21:32:09] 2025-12-02 20:32:05,608 | INFO     | traces error code: 0
[2025-12-02 21:32:09] 2025-12-02 20:32:05,608 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 21:32:09] 2025-12-02 20:32:05,911 [wrapper] ==== pilot stdout END ====
[2025-12-02 21:32:09] 2025-12-02 20:32:05,995 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 21:32:09] 2025-12-02 20:32:06,093 [wrapper] pilotpid: 30929
[2025-12-02 21:32:09] 2025-12-02 20:32:06,196 [wrapper] Pilot exit status: 0
[2025-12-02 21:32:09] 2025-12-02 20:32:06,577 [wrapper] pandaids: 6893848637
[2025-12-02 21:32:09] 2025-12-02 20:32:06,882 [wrapper] cleanup supervisor_pilot 23068 30930
[2025-12-02 21:32:09] 2025-12-02 20:32:06,905 [wrapper] Test setup, not cleaning
[2025-12-02 21:32:09] 2025-12-02 20:32:07,015 [wrapper] apfmon messages muted
[2025-12-02 21:32:09] 2025-12-02 20:32:07,116 [wrapper] ==== wrapper stdout END ====
[2025-12-02 21:32:09] 2025-12-02 20:32:07,234 [wrapper] ==== wrapper stderr END ====
[2025-12-02 21:32:09]  *** Error codes and diagnostics ***
[2025-12-02 21:32:09]     "exeErrorCode": 0,
[2025-12-02 21:32:09]     "exeErrorDiag": "",
[2025-12-02 21:32:09]     "pilotErrorCode": 0,
[2025-12-02 21:32:09]     "pilotErrorDiag": "",
[2025-12-02 21:32:09]  *** Listing of results directory ***
[2025-12-02 21:32:09] total 1338312
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:49 queuedata.json
[2025-12-02 21:32:09] -rwx------. 1 boinc boinc     36292 Nov 20 11:49 runpilot2-wrapper.sh
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc       100 Dec  1 22:04 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 21:32:09] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 22:04 run_atlas
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc       105 Dec  1 22:04 job.xml
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc      6393 Dec  1 22:04 init_data.xml
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc 410980866 Dec  1 22:04 EVNT.47493127._000285.pool.root.1
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc     15847 Dec  1 22:04 start_atlas.sh
[2025-12-02 21:32:09] drwxrwx--x. 2 boinc boinc        68 Dec  1 22:04 shared
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc    590098 Dec  1 22:04 input.tar.gz
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc         0 Dec  1 22:04 boinc_lockfile
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc      2786 Dec  1 22:04 pandaJob.out
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc    992004 Dec  1 22:04 agis_schedconf.cvmfs.json
[2025-12-02 21:32:09] drwx------. 5 boinc boinc      4096 Dec  1 22:04 pilot3
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc       533 Dec  2 21:09 boinc_task_state.xml
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc 928262335 Dec  2 21:28 HITS.47523449._002849.pool.root.1
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc      1031 Dec  2 21:29 memory_monitor_summary.json
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc   1516240 Dec  2 21:29 agis_ddmendpoints.agis.ALL.json
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc   2441623 Dec  2 21:29 log.47523449._002849.job.log.tgz.1
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc      8624 Dec  2 21:31 heartbeat.json
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc        95 Dec  2 21:31 pilot_heartbeat.json
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc      4884 Dec  2 21:32 pilotlog.txt
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc      8192 Dec  2 21:32 boinc_mmap_file
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc        29 Dec  2 21:32 wrapper_checkpoint.txt
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc  11194654 Dec  2 21:32 log.47523449._002849.job.log.1
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc       353 Dec  2 21:32 output.list
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc       620 Dec  2 21:32 runtime_log
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc  13660160 Dec  2 21:32 result.tar.gz
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc      8817 Dec  2 21:32 runtime_log.err
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc       662 Dec  2 21:32 0gELDmjPHg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmDYHKDmAg0TRo.diag
[2025-12-02 21:32:09] -rw-r--r--. 1 boinc boinc     21456 Dec  2 21:32 stderr.txt
[2025-12-02 21:32:09] HITS file was successfully produced:
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc 928262335 Dec  2 21:28 shared/HITS.pool.root.1
[2025-12-02 21:32:09]  *** Contents of shared directory: ***
[2025-12-02 21:32:09] total 1321796
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc 410980866 Dec  1 22:04 ATLAS.root_0
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc     15847 Dec  1 22:04 start_atlas.sh
[2025-12-02 21:32:09] -rw-r--r--. 2 boinc boinc    590098 Dec  1 22:04 input.tar.gz
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc 928262335 Dec  2 21:28 HITS.pool.root.1
[2025-12-02 21:32:09] -rw-------. 1 boinc boinc  13660160 Dec  2 21:32 result.tar.gz
21:32:11 (26712): run_atlas exited; CPU time 321368.354605
21:32:11 (26712): called boinc_finish(0)

</stderr_txt>
]]>

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