Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
14:28:48 (1863157): wrapper (7.7.26015): starting
14:28:48 (1863157): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 14:28:48] Arguments: --nthreads 12
[2025-11-29 14:28:48] Threads: 12
[2025-11-29 14:28:48] Checking for CVMFS
[2025-11-29 14:28:49] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 14:28:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 14:28:49] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 14:28:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 14:28:50] 2.11.5.0 285088 33021 224988 153458 0 226 34143734 45568001 17905 130560 0 288429256 99.757 205585187 30682 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 14:28:50] CVMFS is ok
[2025-11-29 14:28:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 14:28:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 14:28:50] Further information can be found at the LHC@home message board.
[2025-11-29 14:28:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 14:28:50] Checking for apptainer binary...
[2025-11-29 14:28:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 14:28:50] Running /usr/bin/apptainer --version
[2025-11-29 14:28:50] apptainer version 1.4.1-1.el9
[2025-11-29 14:28:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 14:28:52] wns0079.triumf.lcg
[2025-11-29 14:28:52] apptainer works
[2025-11-29 14:28:52] Set ATHENA_PROC_NUMBER=12
[2025-11-29 14:28:52] Set ATHENA_CORE_NUMBER=12
[2025-11-29 14:28:52] Starting ATLAS job with PandaID=6897928633
[2025-11-29 14:28:52] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 14:39:08]  *** The last 200 lines of the pilot log: ***
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | WARNING  | wrong length of table data, x=[1764455532.0, 1764455593.0, 1764455654.0, 1764455715.0], y=[1125.0, 311871.0, 760721.0, 591577.0] (must be same and length>=4)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . Timing measurements:
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . get job = 1 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . initial setup = 6 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . payload setup = 52 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . stage-in = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . payload execution = 243 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . stage-out = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . log creation = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 14:39:08] 2025-11-29 22:38:25,049 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897928633/pilotlog.txt
[2025-11-29 14:39:08] 2025-11-29 22:38:25,102 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 14:39:08] - Log from pilotlog.txt -
[2025-11-29 14:39:08] 2025-11-29 22:38:25,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897928633/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | INFO     | extracted standard info from prmon json
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | WARNING  | wrong length of table data, x=[1764455532.0, 1764455593.0, 1764455654.0, 1764455715.0], y=[1125.0, 311871.0, 760721.0, 591577.0] (must be same and length>=4)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . Timing measurements:
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . get job = 1 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . initial setup = 6 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . payload setup = 52 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . stage-in = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . payload execution = 243 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . stage-out = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . log creation = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 14:39:08] 2025-11-29 22:38:25,049 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897928633/pilotlog.txt
[2025-11-29 14:39:08] 2025-11-29 22:38:25,103 | WARNING  | 
[2025-11-29 14:39:08] [begin log extracts]
[2025-11-29 14:39:08] - Log from pilotlog.txt -
[2025-11-29 14:39:08] 2025-11-29 22:38:25,038 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897928633/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | INFO     | extracted standard info from prmon json
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 14:39:08] 2025-11-29 22:38:25,039 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | WARNING  | wrong length of table data, x=[1764455532.0, 1764455593.0, 1764455654.0, 1764455715.0], y=[1125.0, 311871.0, 760721.0, 591577.0] (must be same and length>=4)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | could have reported an average CPU frequency of 2669 MHz (4 samples)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . Timing measurements:
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . get job = 1 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . initial setup = 6 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . payload setup = 52 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,040 | INFO     | . stage-in = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . payload execution = 243 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . stage-out = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,041 | INFO     | . log creation = 0 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | ..............................
[2025-11-29 14:39:08] 2025-11-29 22:38:25,048 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 14:39:08] 2025-11-29 22:38:25,049 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897928633/pilotlog.txt
[2025-11-29 14:39:08] [end log extracts]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,103 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,104 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 14:39:08] 2025-11-29 22:38:25,362 | INFO     | 
[2025-11-29 14:39:08] 2025-11-29 22:38:25,362 | INFO     | job summary report
[2025-11-29 14:39:08] 2025-11-29 22:38:25,362 | INFO     | --------------------------------------------------
[2025-11-29 14:39:08] 2025-11-29 22:38:25,362 | INFO     | PanDA job id: 6897928633
[2025-11-29 14:39:08] 2025-11-29 22:38:25,362 | INFO     | task id: 47531111
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 14:35:52,163 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | pilot state: failed 
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | transexitcode: 65
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | exeerrorcode: 65
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | exitcode: 65
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | cpuconsumptiontime: 64 s
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | nevents: 0
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | neventsw: 0
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | pid: 1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | pgrp: 1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | corecount: 12
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | event service: False
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | sizes: {0: 2284214, 1: 2284298, 2: 2284497, 3: 2284497, 14: 2284525, 25: 2284553, 26: 2284971, 36: 2284999, 301: 2308632, 303: 2312922, 305: 2312978, 445: 2313452}
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | --------------------------------------------------
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | 
[2025-11-29 14:39:08] 2025-11-29 22:38:25,363 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 14:39:08] 2025-11-29 22:38:25,381 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,381 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,381 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,381 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 14:39:08] 2025-11-29 22:38:25,382 | INFO     | job 6897928633 has completed (purged errors)
[2025-11-29 14:39:08] 2025-11-29 22:38:25,383 | INFO     | overall cleanup function is called
[2025-11-29 14:39:08] 2025-11-29 22:38:26,411 | INFO     | --- collectZombieJob: --- 10, [1875085]
[2025-11-29 14:39:08] 2025-11-29 22:38:26,411 | INFO     | zombie collector waiting for pid 1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:26,411 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 14:39:08] 2025-11-29 22:38:26,411 | INFO     | collected zombie processes
[2025-11-29 14:39:08] 2025-11-29 22:38:26,411 | INFO     | will attempt to kill all subprocesses of pid=1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:27,550 | INFO     | process IDs to be killed: [1875085] (in reverse order)
[2025-11-29 14:39:08] 2025-11-29 22:38:27,688 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 14:39:08] 2025-11-29 22:38:27,689 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 14:39:08] 2025-11-29 22:38:27,716 | INFO     | did not find any defunct processes belonging to 1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:27,759 | INFO     | did not find any defunct processes belonging to 1875085
[2025-11-29 14:39:08] 2025-11-29 22:38:27,760 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 14:39:08] 2025-11-29 22:38:27,761 | INFO     | ready for new job
[2025-11-29 14:39:08] 2025-11-29 22:38:27,761 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 14:39:08] 2025-11-29 22:38:27,762 | INFO     | ***************************************
[2025-11-29 14:39:08] 2025-11-29 22:38:27,762 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 14:39:08] 2025-11-29 22:38:27,762 | INFO     | ***************************************
[2025-11-29 14:39:08] 2025-11-29 22:38:27,762 | INFO     | 
[2025-11-29 14:39:08] 2025-11-29 22:38:27,794 | INFO     | architecture information:
[2025-11-29 14:39:08] 2025-11-29 22:38:27,802 | INFO     | executing command: cat /etc/os-release
[2025-11-29 14:39:08] 2025-11-29 22:38:27,904 | INFO     | cat /etc/os-release:
[2025-11-29 14:39:08] NAME="CentOS Linux"
[2025-11-29 14:39:08] VERSION="7 (Core)"
[2025-11-29 14:39:08] ID="centos"
[2025-11-29 14:39:08] ID_LIKE="rhel fedora"
[2025-11-29 14:39:08] VERSION_ID="7"
[2025-11-29 14:39:08] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 14:39:08] ANSI_COLOR="0;31"
[2025-11-29 14:39:08] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 14:39:08] HOME_URL="https://www.centos.org/"
[2025-11-29 14:39:08] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 14:39:08] 
[2025-11-29 14:39:08] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 14:39:08] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 14:39:08] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 14:39:08] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 14:39:08] 
[2025-11-29 14:39:08] 2025-11-29 22:38:27,904 | INFO     | ***************************************
[2025-11-29 14:39:08] 2025-11-29 22:38:28,408 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 14:39:08] 2025-11-29 22:38:28,467 | INFO     | sufficient remaining disk space (1975782473728 B)
[2025-11-29 14:39:08] 2025-11-29 22:38:28,467 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 14:39:08] 2025-11-29 22:38:28,468 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 14:39:08] 2025-11-29 22:38:28,468 | INFO     | update_server=False
[2025-11-29 14:39:08] 2025-11-29 22:38:28,468 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 14:39:08] 2025-11-29 22:38:28,905 | INFO     | all payload control threads have been joined
[2025-11-29 14:39:08] 2025-11-29 22:38:28,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 14:39:08] 2025-11-29 22:38:28,999 | INFO     | aborting loop
[2025-11-29 14:39:08] 2025-11-29 22:38:29,079 | INFO     | all data control threads have been joined
[2025-11-29 14:39:08] 2025-11-29 22:38:29,337 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 14:39:08] 2025-11-29 22:38:29,474 | INFO     | [job] retrieve thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:29,911 | INFO     | [payload] control thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:29,925 | INFO     | [data] copytool_in thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:29,934 | INFO     | [payload] validate_post thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,005 | INFO     | [job] job monitor thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,060 | INFO     | all job control threads have been joined
[2025-11-29 14:39:08] 2025-11-29 22:38:30,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,085 | INFO     | [data] control thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,106 | INFO     | [payload] failed_post thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,177 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,235 | INFO     | [job] validate thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,235 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:30,385 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 14:39:08] 2025-11-29 22:38:30,938 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:31,066 | INFO     | [job] control thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:31,339 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 14:39:08] 2025-11-29 22:38:31,344 | INFO     | [data] copytool_out thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:31,391 | INFO     | [job] queue monitor thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:35,348 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 14:39:08] 2025-11-29 22:38:59,077 | INFO     | PID=1867082 has CPU usage=2.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-29 14:39:08] 2025-11-29 22:38:59,081 | INFO     | .. there are 42 such processes running
[2025-11-29 14:39:08] 2025-11-29 22:38:59,081 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 14:39:08] 2025-11-29 22:38:59,081 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 14:39:08] 2025-11-29 22:38:59,081 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 14:39:08] 2025-11-29 22:39:01,181 | INFO     | [monitor] cgroup control has ended
[2025-11-29 14:39:08] 2025-11-29 22:39:01,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139902708254528)>', '<ExcThread(monitor, started 139902184322816)>']
[2025-11-29 14:39:08] 2025-11-29 22:39:02,099 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 14:39:08] 2025-11-29 22:39:02,099 | INFO     | [monitor] control thread has ended
[2025-11-29 14:39:08] 2025-11-29 22:39:07,021 | INFO     | all workflow threads have been joined
[2025-11-29 14:39:08] 2025-11-29 22:39:07,021 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 14:39:08] 2025-11-29 22:39:07,021 | INFO     | traces error code: 0
[2025-11-29 14:39:08] 2025-11-29 22:39:07,021 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 14:39:08] 2025-11-29 22:39:07,496 [wrapper] ==== pilot stdout END ====
[2025-11-29 14:39:08] 2025-11-29 22:39:07,524 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 14:39:08] 2025-11-29 22:39:07,560 [wrapper] pilotpid: 1867082
[2025-11-29 14:39:08] 2025-11-29 22:39:07,574 [wrapper] Pilot exit status: 0
[2025-11-29 14:39:08] 2025-11-29 22:39:07,656 [wrapper] pandaids: 6897928633
[2025-11-29 14:39:08] 2025-11-29 22:39:07,817 [wrapper] cleanup supervisor_pilot 1867088 1867083
[2025-11-29 14:39:08] 2025-11-29 22:39:07,819 [wrapper] Test setup, not cleaning
[2025-11-29 14:39:08] 2025-11-29 22:39:07,821 [wrapper] apfmon messages muted
[2025-11-29 14:39:08] 2025-11-29 22:39:07,822 [wrapper] ==== wrapper stdout END ====
[2025-11-29 14:39:08] 2025-11-29 22:39:07,824 [wrapper] ==== wrapper stderr END ====
[2025-11-29 14:39:08]  *** Error codes and diagnostics ***
[2025-11-29 14:39:08]     "exeErrorCode": 65,
[2025-11-29 14:39:08]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 14:39:08]     "pilotErrorCode": 1305,
[2025-11-29 14:39:08]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 14:39:08]  *** Listing of results directory ***
[2025-11-29 14:39:08] total 372068
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc    576529 Nov 28 14:41 pilot3.tar.gz
[2025-11-29 14:39:08] -rwx------. 1 boinc boinc     36292 Nov 28 14:43 runpilot2-wrapper.sh
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc      5112 Nov 28 14:43 queuedata.json
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc       100 Nov 29 14:28 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 14:39:08] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 14:28 run_atlas
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc       105 Nov 29 14:28 job.xml
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc      6596 Nov 29 14:28 init_data.xml
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc 376722251 Nov 29 14:28 EVNT.47531104._000001.pool.root.1
[2025-11-29 14:39:08] drwxrwx--x. 2 boinc boinc      4096 Nov 29 14:28 shared
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc    590116 Nov 29 14:28 input.tar.gz
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc     15847 Nov 29 14:28 start_atlas.sh
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc         0 Nov 29 14:28 boinc_lockfile
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc      2876 Nov 29 14:28 pandaJob.out
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc    991826 Nov 29 14:29 agis_schedconf.cvmfs.json
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc   1516240 Nov 29 14:29 agis_ddmendpoints.agis.ALL.json
[2025-11-29 14:39:08] drwx------. 5 boinc boinc      4096 Nov 29 14:30 pilot3
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc       524 Nov 29 14:34 boinc_task_state.xml
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc      1001 Nov 29 14:35 memory_monitor_summary.json
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc     52910 Nov 29 14:36 log.47531111._000025.job.log.tgz.1
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc        95 Nov 29 14:38 pilot_heartbeat.json
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc      9880 Nov 29 14:38 heartbeat.json
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc        23 Nov 29 14:39 wrapper_checkpoint.txt
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc      4823 Nov 29 14:39 pilotlog.txt
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc    125733 Nov 29 14:39 log.47531111._000025.job.log.1
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc       186 Nov 29 14:39 output.list
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc       620 Nov 29 14:39 runtime_log
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc    204800 Nov 29 14:39 result.tar.gz
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc      8192 Nov 29 14:39 boinc_mmap_file
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc      8636 Nov 29 14:39 runtime_log.err
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc       647 Nov 29 14:39 pAQODmUMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmiSLKDmNSgnkm.diag
[2025-11-29 14:39:08] -rw-r--r--. 1 boinc boinc     21965 Nov 29 14:39 stderr.txt
[2025-11-29 14:39:08] No HITS result produced
[2025-11-29 14:39:08]  *** Contents of shared directory: ***
[2025-11-29 14:39:08] total 368696
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc 376722251 Nov 29 14:28 ATLAS.root_0
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc    590116 Nov 29 14:28 input.tar.gz
[2025-11-29 14:39:08] -rw-r--r--. 2 boinc boinc     15847 Nov 29 14:28 start_atlas.sh
[2025-11-29 14:39:08] -rw-------. 1 boinc boinc    204800 Nov 29 14:39 result.tar.gz
14:39:09 (1863157): run_atlas exited; CPU time 73.807187
14:39:09 (1863157): called boinc_finish(0)

</stderr_txt>
]]>

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