Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
21:58:46 (5156): wrapper (7.7.26015): starting
21:58:46 (5156): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 21:58:46] Arguments: --nthreads 8
[2025-12-01 21:58:46] Threads: 8
[2025-12-01 21:58:46] Checking for CVMFS
[2025-12-01 21:58:47] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 21:58:47] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 21:58:47] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 21:58:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 21:58:47] 2.11.2.0 19872 292928 142436 153531 1 223 19310736 25165825 2289 130560 25 124683126 99.871 80483426 2536 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 21:58:47] CVMFS is ok
[2025-12-01 21:58:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 21:58:47] Checking for apptainer binary...
[2025-12-01 21:58:47] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 21:58:47] Running /usr/bin/apptainer --version
[2025-12-01 21:58:47] apptainer version 1.3.2-1.el7
[2025-12-01 21:58:47] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 21:58:49] cg-vwn350.simple-grid.lan
[2025-12-01 21:58:49] apptainer works
[2025-12-01 21:58:49] Set ATHENA_PROC_NUMBER=8
[2025-12-01 21:58:49] Set ATHENA_CORE_NUMBER=8
[2025-12-01 21:58:49] Starting ATLAS job with PandaID=6899133900
[2025-12-01 21:58:49] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/13 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 17:39:22]  *** The last 200 lines of the pilot log: ***
[2025-12-02 17:39:22] 2025-12-02 16:38:36,836 | INFO     | monitor loop #4715: job 0:6899133900 is in state 'finished'
[2025-12-02 17:39:22] 2025-12-02 16:38:36,837 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 17:39:22] 2025-12-02 16:38:37,468 | INFO     | time since job start (70769s) is within the limit (172800.0s)
[2025-12-02 17:39:22] 2025-12-02 16:38:38,634 | INFO     | PID=8888 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-02 17:39:22] 2025-12-02 16:38:38,634 | INFO     | .. there are 9 such processes running
[2025-12-02 17:39:22] 2025-12-02 16:38:39,348 | INFO     | monitor loop #4716: job 0:6899133900 is in state 'finished'
[2025-12-02 17:39:22] 2025-12-02 16:38:39,349 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-02 17:39:22] 2025-12-02 16:38:39,637 | INFO     | time since job start (70771s) is within the limit (172800.0s)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,146 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 17:39:22] 2025-12-02 16:38:41,147 | INFO     | found 8 cores (1 core per socket, 8 sockets) , CPU MHz: 1999.999
[2025-12-02 17:39:22] 2025-12-02 16:38:41,149 | INFO     | using path: /var/lib/boinc/slots/13/PanDA_Pilot-6899133900/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,150 | INFO     | extracted standard info from prmon json
[2025-12-02 17:39:22] 2025-12-02 16:38:41,150 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 17:39:22] 2025-12-02 16:38:41,150 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 17:39:22] 2025-12-02 16:38:41,183 | INFO     | fitting pss+swap vs Time
[2025-12-02 17:39:22] 2025-12-02 16:38:41,185 | INFO     | sum of square deviations: 481507618511.07404
[2025-12-02 17:39:22] 2025-12-02 16:38:41,243 | INFO     | sum of deviations: 2372694678251.901
[2025-12-02 17:39:22] 2025-12-02 16:38:41,243 | INFO     | mean x: 1764658097.4542315
[2025-12-02 17:39:22] 2025-12-02 16:38:41,243 | INFO     | mean y: 3346762.2245250433
[2025-12-02 17:39:22] 2025-12-02 16:38:41,244 | INFO     | intersect: -8692247483.430145
[2025-12-02 17:39:22] 2025-12-02 16:38:41,245 | INFO     | chi2: 15.445180507499172
[2025-12-02 17:39:22] 2025-12-02 16:38:41,247 | INFO     | sum of square deviations: 475297690254.0017
[2025-12-02 17:39:22] 2025-12-02 16:38:41,299 | INFO     | sum of deviations: 2848225890795.579
[2025-12-02 17:39:22] 2025-12-02 16:38:41,299 | INFO     | mean x: 1764657944.9583695
[2025-12-02 17:39:22] 2025-12-02 16:38:41,299 | INFO     | mean y: 3358442.137033825
[2025-12-02 17:39:22] 2025-12-02 16:38:41,299 | INFO     | intersect: -10571370933.346674
[2025-12-02 17:39:22] 2025-12-02 16:38:41,301 | INFO     | chi2: 11.964116551698469
[2025-12-02 17:39:22] 2025-12-02 16:38:41,301 | INFO     | current chi2=11.964116551698469 (change=22.538188881059213 %)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,301 | INFO     | right removable region: 1152
[2025-12-02 17:39:22] 2025-12-02 16:38:41,303 | INFO     | sum of square deviations: 475297016204.00183
[2025-12-02 17:39:22] 2025-12-02 16:38:41,343 | INFO     | sum of deviations: 1832183177052.1404
[2025-12-02 17:39:22] 2025-12-02 16:38:41,343 | INFO     | mean x: 1764658249.9583695
[2025-12-02 17:39:22] 2025-12-02 16:38:41,343 | INFO     | mean y: 3360033.6695576757
[2025-12-02 17:39:22] 2025-12-02 16:38:41,343 | INFO     | intersect: -6799075177.563256
[2025-12-02 17:39:22] 2025-12-02 16:38:41,345 | INFO     | chi2: 11.28395362012845
[2025-12-02 17:39:22] 2025-12-02 16:38:41,345 | INFO     | current chi2=11.28395362012845 (change=26.941911655550427 %)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,347 | INFO     | sum of square deviations: 469140042809.39014
[2025-12-02 17:39:22] 2025-12-02 16:38:41,402 | INFO     | sum of deviations: 1440695350690.0684
[2025-12-02 17:39:22] 2025-12-02 16:38:41,402 | INFO     | mean x: 1764658402.4625435
[2025-12-02 17:39:22] 2025-12-02 16:38:41,402 | INFO     | mean y: 3369725.606271777
[2025-12-02 17:39:22] 2025-12-02 16:38:41,402 | INFO     | intersect: -5415769388.504461
[2025-12-02 17:39:22] 2025-12-02 16:38:41,408 | INFO     | chi2: 9.12983329375523
[2025-12-02 17:39:22] 2025-12-02 16:38:41,408 | INFO     | current chi2=9.12983329375523 (change=19.09012035046542 %)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,408 | INFO     | left removable region: 20
[2025-12-02 17:39:22] 2025-12-02 16:38:41,410 | INFO     | sum of square deviations: 449796841359.8549
[2025-12-02 17:39:22] 2025-12-02 16:38:41,477 | INFO     | sum of deviations: 1857765385250.2383
[2025-12-02 17:39:22] 2025-12-02 16:38:41,477 | INFO     | mean x: 1764658524.4681978
[2025-12-02 17:39:22] 2025-12-02 16:38:41,478 | INFO     | mean y: 3388767.631625442
[2025-12-02 17:39:22] 2025-12-02 16:38:41,478 | INFO     | intersect: -7285060643.512625
[2025-12-02 17:39:22] 2025-12-02 16:38:41,479 | INFO     | chi2: 4.542987771287972
[2025-12-02 17:39:22] 2025-12-02 16:38:41,479 | INFO     | current memory leak: 4.13 B/s (using 1132 data points, chi2=4.54)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,481 | INFO     | could have reported an average CPU frequency of 1999 MHz (40 samples)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | ..............................
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . Timing measurements:
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . get job = 0 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . initial setup = 2 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . payload setup = 21 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . stage-in = 0 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,482 | INFO     | . payload execution = 70633 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,483 | INFO     | . stage-out = 4 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,483 | INFO     | . log creation = 1 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,483 | INFO     | ..............................
[2025-12-02 17:39:22] 2025-12-02 16:38:41,611 | INFO     | 
[2025-12-02 17:39:22] 2025-12-02 16:38:41,611 | INFO     | job summary report
[2025-12-02 17:39:22] 2025-12-02 16:38:41,611 | INFO     | --------------------------------------------------
[2025-12-02 17:39:22] 2025-12-02 16:38:41,611 | INFO     | PanDA job id: 6899133900
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | task id: 47531058
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | errors: (none)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | pilot state: finished 
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | transexitcode: 0
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | exeerrorcode: 0
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | exeerrordiag: 
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | exitcode: 0
[2025-12-02 17:39:22] 2025-12-02 16:38:41,612 | INFO     | exitmsg: OK
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | cpuconsumptiontime: 267628 s
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | nevents: 1000
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | neventsw: 0
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | pid: 16090
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | pgrp: 16090
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | corecount: 8
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | event service: False
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | sizes: {0: 2284448, 1: 2284476, 7: 2284738, 11: 2284766, 70658: 2357251, 70664: 2366431, 70752: 2366621}
[2025-12-02 17:39:22] 2025-12-02 16:38:41,613 | INFO     | --------------------------------------------------
[2025-12-02 17:39:22] 2025-12-02 16:38:41,614 | INFO     | 
[2025-12-02 17:39:22] 2025-12-02 16:38:41,614 | INFO     | executing command: ls -lF /var/lib/boinc/slots/13
[2025-12-02 17:39:22] 2025-12-02 16:38:41,656 | INFO     | time since job start (70773s) is within the limit (172800.0s)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,918 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,918 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,918 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,918 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,918 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,919 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | job 6899133900 has completed (purged errors)
[2025-12-02 17:39:22] 2025-12-02 16:38:41,920 | INFO     | overall cleanup function is called
[2025-12-02 17:39:22] 2025-12-02 16:38:42,937 | INFO     | --- collectZombieJob: --- 10, [16090]
[2025-12-02 17:39:22] 2025-12-02 16:38:42,938 | INFO     | zombie collector waiting for pid 16090
[2025-12-02 17:39:22] 2025-12-02 16:38:42,938 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 17:39:22] 2025-12-02 16:38:42,938 | INFO     | collected zombie processes
[2025-12-02 17:39:22] 2025-12-02 16:38:42,938 | INFO     | will attempt to kill all subprocesses of pid=16090
[2025-12-02 17:39:22] 2025-12-02 16:38:43,054 | INFO     | process IDs to be killed: [16090] (in reverse order)
[2025-12-02 17:39:22] 2025-12-02 16:38:43,818 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 17:39:22] 2025-12-02 16:38:43,818 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 17:39:22] 2025-12-02 16:38:43,821 | INFO     | did not find any defunct processes belonging to 16090
[2025-12-02 17:39:22] 2025-12-02 16:38:43,825 | INFO     | did not find any defunct processes belonging to 16090
[2025-12-02 17:39:22] 2025-12-02 16:38:43,882 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 17:39:22] 2025-12-02 16:38:43,882 | INFO     | ready for new job
[2025-12-02 17:39:22] 2025-12-02 16:38:43,882 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 17:39:22] 2025-12-02 16:38:43,887 | INFO     | ***************************************
[2025-12-02 17:39:22] 2025-12-02 16:38:43,887 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 17:39:22] 2025-12-02 16:38:43,887 | INFO     | ***************************************
[2025-12-02 17:39:22] 2025-12-02 16:38:43,887 | INFO     | 
[2025-12-02 17:39:22] 2025-12-02 16:38:43,888 | INFO     | pilot is running in a VM
[2025-12-02 17:39:22] 2025-12-02 16:38:43,888 | INFO     | architecture information:
[2025-12-02 17:39:22] 2025-12-02 16:38:43,905 | INFO     | executing command: cat /etc/os-release
[2025-12-02 17:39:22] 2025-12-02 16:38:44,246 | INFO     | cat /etc/os-release:
[2025-12-02 17:39:22] NAME="CentOS Linux"
[2025-12-02 17:39:22] VERSION="7 (Core)"
[2025-12-02 17:39:22] ID="centos"
[2025-12-02 17:39:22] ID_LIKE="rhel fedora"
[2025-12-02 17:39:22] VERSION_ID="7"
[2025-12-02 17:39:22] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 17:39:22] ANSI_COLOR="0;31"
[2025-12-02 17:39:22] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 17:39:22] HOME_URL="https://www.centos.org/"
[2025-12-02 17:39:22] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 17:39:22] 
[2025-12-02 17:39:22] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 17:39:22] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 17:39:22] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 17:39:22] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 17:39:22] 
[2025-12-02 17:39:22] 2025-12-02 16:38:44,246 | INFO     | ***************************************
[2025-12-02 17:39:22] 2025-12-02 16:38:44,750 | INFO     | executing command: df -mP /var/lib/boinc/slots/13
[2025-12-02 17:39:22] 2025-12-02 16:38:45,059 | INFO     | sufficient remaining disk space (488154071040 B)
[2025-12-02 17:39:22] 2025-12-02 16:38:45,059 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 17:39:22] 2025-12-02 16:38:45,060 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 17:39:22] 2025-12-02 16:38:45,060 | INFO     | update_server=False
[2025-12-02 17:39:22] 2025-12-02 16:38:45,060 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 17:39:22] 2025-12-02 16:38:45,060 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 17:39:22] 2025-12-02 16:38:45,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 17:39:22] 2025-12-02 16:38:45,372 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:39:22] 2025-12-02 16:38:45,373 | INFO     | aborting loop
[2025-12-02 17:39:22] 2025-12-02 16:38:45,506 | INFO     | all data control threads have been joined
[2025-12-02 17:39:22] 2025-12-02 16:38:45,596 | INFO     | all payload control threads have been joined
[2025-12-02 17:39:22] 2025-12-02 16:38:46,065 | INFO     | [job] retrieve thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,161 | INFO     | [payload] failed_post thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,220 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,379 | INFO     | [job] job monitor thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,387 | INFO     | [payload] validate_post thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,512 | INFO     | [data] control thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,569 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,603 | INFO     | [payload] control thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:46,627 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 17:39:22] 2025-12-02 16:38:46,654 | INFO     | all job control threads have been joined
[2025-12-02 17:39:22] 2025-12-02 16:38:46,787 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,068 | INFO     | [data] copytool_out thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,426 | INFO     | [data] copytool_in thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,481 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,482 | INFO     | [job] validate thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,633 | INFO     | [job] queue monitor thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:47,660 | INFO     | [job] control thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:38:49,165 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 17:39:22] 2025-12-02 16:39:12,011 | INFO     | [monitor] cgroup control has ended
[2025-12-02 17:39:22] 2025-12-02 16:39:12,993 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140412415219520)>', '<ExcThread(monitor, started 140411960006400)>']
[2025-12-02 17:39:22] 2025-12-02 16:39:14,814 | INFO     | PID=8888 has CPU usage=2.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-12-02 17:39:22] 2025-12-02 16:39:14,814 | INFO     | .. there are 9 such processes running
[2025-12-02 17:39:22] 2025-12-02 16:39:14,815 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 17:39:22] 2025-12-02 16:39:14,815 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 17:39:22] 2025-12-02 16:39:14,815 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 17:39:22] 2025-12-02 16:39:14,815 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 17:39:22] 2025-12-02 16:39:14,815 | INFO     | [monitor] control thread has ended
[2025-12-02 17:39:22] 2025-12-02 16:39:18,019 | INFO     | all workflow threads have been joined
[2025-12-02 17:39:22] 2025-12-02 16:39:18,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 17:39:22] 2025-12-02 16:39:18,020 | INFO     | traces error code: 0
[2025-12-02 17:39:22] 2025-12-02 16:39:18,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 17:39:22] 2025-12-02 16:39:18,280 [wrapper] ==== pilot stdout END ====
[2025-12-02 17:39:22] 2025-12-02 16:39:18,399 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 17:39:22] 2025-12-02 16:39:18,488 [wrapper] pilotpid: 8888
[2025-12-02 17:39:22] 2025-12-02 16:39:18,567 [wrapper] Pilot exit status: 0
[2025-12-02 17:39:22] 2025-12-02 16:39:18,940 [wrapper] pandaids: 6899133900
[2025-12-02 17:39:22] 2025-12-02 16:39:19,888 [wrapper] cleanup supervisor_pilot 14415 8889
[2025-12-02 17:39:22] 2025-12-02 16:39:19,963 [wrapper] Test setup, not cleaning
[2025-12-02 17:39:22] 2025-12-02 16:39:20,051 [wrapper] apfmon messages muted
[2025-12-02 17:39:22] 2025-12-02 16:39:20,080 [wrapper] ==== wrapper stdout END ====
[2025-12-02 17:39:22] 2025-12-02 16:39:20,192 [wrapper] ==== wrapper stderr END ====
[2025-12-02 17:39:22]  *** Error codes and diagnostics ***
[2025-12-02 17:39:22]     "exeErrorCode": 0,
[2025-12-02 17:39:22]     "exeErrorDiag": "",
[2025-12-02 17:39:22]     "pilotErrorCode": 0,
[2025-12-02 17:39:22]     "pilotErrorDiag": "",
[2025-12-02 17:39:22]  *** Listing of results directory ***
[2025-12-02 17:39:22] total 1079500
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc    576529 Nov 28 23:41 pilot3.tar.gz
[2025-12-02 17:39:22] -rwx------. 1 boinc boinc     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc      5112 Nov 28 23:43 queuedata.json
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc       100 Dec  1 21:58 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 17:39:22] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 21:58 run_atlas
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc       105 Dec  1 21:58 job.xml
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc 376351561 Dec  1 21:58 EVNT.47531050._000508.pool.root.1
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc     15847 Dec  1 21:58 start_atlas.sh
[2025-12-02 17:39:22] drwxrwx--x. 2 boinc boinc        68 Dec  1 21:58 shared
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc    590123 Dec  1 21:58 input.tar.gz
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc      6393 Dec  1 21:58 init_data.xml
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc         0 Dec  1 21:58 boinc_lockfile
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc      2877 Dec  1 21:58 pandaJob.out
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc    992004 Dec  1 21:59 agis_schedconf.cvmfs.json
[2025-12-02 17:39:22] drwx------. 5 boinc boinc      4096 Dec  1 21:59 pilot3
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc       533 Dec  2 17:18 boinc_task_state.xml
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc 701455128 Dec  2 17:36 HITS.47531058._001251.pool.root.1
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc      1032 Dec  2 17:37 memory_monitor_summary.json
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc   1516240 Dec  2 17:37 agis_ddmendpoints.agis.ALL.json
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc   2376489 Dec  2 17:37 log.47531058._001251.job.log.tgz.1
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc     26345 Dec  2 17:38 heartbeat.json
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc      8192 Dec  2 17:39 boinc_mmap_file
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc        29 Dec  2 17:39 wrapper_checkpoint.txt
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc        95 Dec  2 17:39 pilot_heartbeat.json
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc      4884 Dec  2 17:39 pilotlog.txt
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc   9455968 Dec  2 17:39 log.47531058._001251.job.log.1
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc       353 Dec  2 17:39 output.list
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc       620 Dec  2 17:39 runtime_log
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc  11868160 Dec  2 17:39 result.tar.gz
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc       661 Dec  2 17:39 Yl8NDmUMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZSLKDmNdDkGo.diag
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc      8833 Dec  2 17:39 runtime_log.err
[2025-12-02 17:39:22] -rw-r--r--. 1 boinc boinc     21230 Dec  2 17:39 stderr.txt
[2025-12-02 17:39:22] HITS file was successfully produced:
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc 701455128 Dec  2 17:36 shared/HITS.pool.root.1
[2025-12-02 17:39:22]  *** Contents of shared directory: ***
[2025-12-02 17:39:22] total 1064736
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc 376351561 Dec  1 21:58 ATLAS.root_0
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc     15847 Dec  1 21:58 start_atlas.sh
[2025-12-02 17:39:22] -rw-r--r--. 2 boinc boinc    590123 Dec  1 21:58 input.tar.gz
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc 701455128 Dec  2 17:36 HITS.pool.root.1
[2025-12-02 17:39:22] -rw-------. 1 boinc boinc  11868160 Dec  2 17:39 result.tar.gz
17:39:23 (5156): run_atlas exited; CPU time 268091.315668
17:39:23 (5156): called boinc_finish(0)

</stderr_txt>
]]>

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