Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
02:35:20 (29667): wrapper (7.7.26015): starting
02:35:20 (29667): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 02:35:20] Arguments: --nthreads 8
[2025-11-30 02:35:20] Threads: 8
[2025-11-30 02:35:20] Checking for CVMFS
[2025-11-30 02:35:20] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 02:35:20] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 02:35:20] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 02:35:20] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 02:35:20] 2.11.0.0 14308 70765 81500 153463 2 1 3063384 4096000 0 130560 14 4596209 99.397 5986511 593 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-30 02:35:20] CVMFS is ok
[2025-11-30 02:35:20] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 02:35:20] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 02:35:20] Further information can be found at the LHC@home message board.
[2025-11-30 02:35:20] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 02:35:20] Checking for apptainer binary...
[2025-11-30 02:35:20] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-30 02:35:20] apptainer is not installed, using version from CVMFS
[2025-11-30 02:35:20] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 02:35:20] WARNING: Environment variable TMPDIR already has value [/tmp/job_10935268/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node413
[2025-11-30 02:35:20] apptainer works
[2025-11-30 02:35:20] Set ATHENA_PROC_NUMBER=8
[2025-11-30 02:35:20] Set ATHENA_CORE_NUMBER=8
[2025-11-30 02:35:20] Starting ATLAS job with PandaID=6899133436
[2025-11-30 02:35:20] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10935268/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 06:41:00]  *** The last 200 lines of the pilot log: ***
[2025-11-30 06:41:00] 2025-11-30 05:40:27,218 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 06:41:00] 2025-11-30 05:40:27,456 | INFO     | time since job start (14701s) is within the limit (172800.0s)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,607 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 06:41:00] 2025-11-30 05:40:28,611 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2739.9571250000004
[2025-11-30 06:41:00] 2025-11-30 05:40:28,617 | INFO     | using path: /tmp/job_10935268/atlas/pilot/slots/0/PanDA_Pilot-6899133436/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,617 | INFO     | extracted standard info from prmon json
[2025-11-30 06:41:00] 2025-11-30 05:40:28,617 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 06:41:00] 2025-11-30 05:40:28,617 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 06:41:00] 2025-11-30 05:40:28,619 | INFO     | fitting pss+swap vs Time
[2025-11-30 06:41:00] 2025-11-30 05:40:28,620 | INFO     | sum of square deviations: 4340323240.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,620 | INFO     | sum of deviations: 537487114492.0002
[2025-11-30 06:41:00] 2025-11-30 05:40:28,620 | INFO     | mean x: 1764473892.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,620 | INFO     | mean y: 3678998.6307053943
[2025-11-30 06:41:00] 2025-11-30 05:40:28,620 | INFO     | intersect: -218501240650.52176
[2025-11-30 06:41:00] 2025-11-30 05:40:28,621 | INFO     | chi2: 6.7670696194591144
[2025-11-30 06:41:00] 2025-11-30 05:40:28,621 | INFO     | sum of square deviations: 4075741535.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | sum of deviations: 601080878961.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | mean x: 1764473739.5
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | mean y: 3715377.6016949154
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | intersect: -260216766499.02023
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | chi2: 4.909101481643939
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | current chi2=4.909101481643939 (change=27.456022211925777 %)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,622 | INFO     | sum of square deviations: 3822136780.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | sum of deviations: 542836224377.99994
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | mean x: 1764473587.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | mean y: 3680351.7792207794
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | intersect: -250594410484.15005
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | chi2: 4.758464323269688
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | current chi2=4.758464323269688 (change=3.0685280990321995 %)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | right removable region: 230
[2025-11-30 06:41:00] 2025-11-30 05:40:28,623 | INFO     | sum of square deviations: 4075741535.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,624 | INFO     | sum of deviations: 420218392679.50006
[2025-11-30 06:41:00] 2025-11-30 05:40:28,624 | INFO     | mean x: 1764474044.5
[2025-11-30 06:41:00] 2025-11-30 05:40:28,624 | INFO     | mean y: 3746515.8601694917
[2025-11-30 06:41:00] 2025-11-30 05:40:28,624 | INFO     | intersect: -181917614428.45856
[2025-11-30 06:41:00] 2025-11-30 05:40:28,625 | INFO     | chi2: 3.0687037366963232
[2025-11-30 06:41:00] 2025-11-30 05:40:28,625 | INFO     | current chi2=3.0687037366963232 (change=54.65239890731903 %)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,625 | INFO     | sum of square deviations: 3822136780.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | sum of deviations: 383134165438.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | mean x: 1764474197.0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | mean y: 3768702.0346320346
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | intersect: -176868590351.65683
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | chi2: 2.8606184986652146
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | current chi2=2.8606184986652146 (change=6.78088391338576 %)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | left removable region: 20
[2025-11-30 06:41:00] 2025-11-30 05:40:28,626 | INFO     | sum of square deviations: 2871616632.5
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | sum of deviations: 346716654349.5
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | mean x: 1764474166.5
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | mean y: 3793921.4523809524
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | intersect: -213037380436.9785
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | chi2: 0.636523850624295
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | current memory leak: 120.74 B/s (using 210 data points, chi2=0.64)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | could have reported an average CPU frequency of 2854 MHz (12 samples)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | ..............................
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | . Timing measurements:
[2025-11-30 06:41:00] 2025-11-30 05:40:28,627 | INFO     | . get job = 0 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . initial setup = 1 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . payload setup = 29 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . stage-in = 0 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . payload execution = 14647 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . stage-out = 1 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | . log creation = 0 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,628 | INFO     | ..............................
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | 
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | job summary report
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | --------------------------------------------------
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | PanDA job id: 6899133436
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | task id: 47531058
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | errors: (none)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | pilot state: finished 
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | transexitcode: 0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | exeerrorcode: 0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | exeerrordiag: 
[2025-11-30 06:41:00] 2025-11-30 05:40:28,816 | INFO     | exitcode: 0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | exitmsg: OK
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | cpuconsumptiontime: 100489 s
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | nevents: 1000
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | neventsw: 0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | pid: 11782
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | pgrp: 11782
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | corecount: 8
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | event service: False
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | sizes: {0: 2284579, 2: 2284841, 11: 2284869, 14680: 2335095, 14682: 2344119, 14685: 2344175, 14689: 2344549}
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | --------------------------------------------------
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | 
[2025-11-30 06:41:00] 2025-11-30 05:40:28,817 | INFO     | executing command: ls -lF /tmp/job_10935268/atlas/pilot/slots/0
[2025-11-30 06:41:00] 2025-11-30 05:40:28,825 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,825 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,825 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | job 6899133436 has completed (purged errors)
[2025-11-30 06:41:00] 2025-11-30 05:40:28,826 | INFO     | overall cleanup function is called
[2025-11-30 06:41:00] 2025-11-30 05:40:29,834 | INFO     | --- collectZombieJob: --- 10, [11782]
[2025-11-30 06:41:00] 2025-11-30 05:40:29,834 | INFO     | zombie collector waiting for pid 11782
[2025-11-30 06:41:00] 2025-11-30 05:40:29,834 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 06:41:00] 2025-11-30 05:40:29,834 | INFO     | collected zombie processes
[2025-11-30 06:41:00] 2025-11-30 05:40:29,834 | INFO     | will attempt to kill all subprocesses of pid=11782
[2025-11-30 06:41:00] 2025-11-30 05:40:29,937 | INFO     | process IDs to be killed: [11782] (in reverse order)
[2025-11-30 06:41:00] 2025-11-30 05:40:29,976 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 06:41:00] 2025-11-30 05:40:29,976 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 06:41:00] 2025-11-30 05:40:29,981 | INFO     | did not find any defunct processes belonging to 11782
[2025-11-30 06:41:00] 2025-11-30 05:40:29,985 | INFO     | did not find any defunct processes belonging to 11782
[2025-11-30 06:41:00] 2025-11-30 05:40:29,985 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 06:41:00] 2025-11-30 05:40:29,985 | INFO     | ready for new job
[2025-11-30 06:41:00] 2025-11-30 05:40:29,985 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 06:41:00] 2025-11-30 05:40:29,986 | INFO     | ***************************************
[2025-11-30 06:41:00] 2025-11-30 05:40:29,986 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 06:41:00] 2025-11-30 05:40:29,986 | INFO     | ***************************************
[2025-11-30 06:41:00] 2025-11-30 05:40:29,986 | INFO     | 
[2025-11-30 06:41:00] 2025-11-30 05:40:30,000 | INFO     | architecture information:
[2025-11-30 06:41:00] 2025-11-30 05:40:30,000 | INFO     | executing command: cat /etc/os-release
[2025-11-30 06:41:00] 2025-11-30 05:40:30,006 | INFO     | cat /etc/os-release:
[2025-11-30 06:41:00] NAME="CentOS Linux"
[2025-11-30 06:41:00] VERSION="7 (Core)"
[2025-11-30 06:41:00] ID="centos"
[2025-11-30 06:41:00] ID_LIKE="rhel fedora"
[2025-11-30 06:41:00] VERSION_ID="7"
[2025-11-30 06:41:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 06:41:00] ANSI_COLOR="0;31"
[2025-11-30 06:41:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 06:41:00] HOME_URL="https://www.centos.org/"
[2025-11-30 06:41:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 06:41:00] 
[2025-11-30 06:41:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 06:41:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 06:41:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 06:41:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 06:41:00] 
[2025-11-30 06:41:00] 2025-11-30 05:40:30,006 | INFO     | ***************************************
[2025-11-30 06:41:00] 2025-11-30 05:40:30,509 | INFO     | executing command: df -mP /tmp/job_10935268/atlas/pilot/slots/0
[2025-11-30 06:41:00] 2025-11-30 05:40:30,516 | INFO     | sufficient remaining disk space (221498048512 B)
[2025-11-30 06:41:00] 2025-11-30 05:40:30,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 06:41:00] 2025-11-30 05:40:30,516 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 06:41:00] 2025-11-30 05:40:30,517 | INFO     | update_server=False
[2025-11-30 06:41:00] 2025-11-30 05:40:30,517 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 06:41:00] 2025-11-30 05:40:30,517 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 06:41:00] 2025-11-30 05:40:30,517 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:41:00] 2025-11-30 05:40:30,726 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 06:41:00] 2025-11-30 05:40:30,726 | INFO     | aborting loop
[2025-11-30 06:41:00] 2025-11-30 05:40:30,832 | INFO     | all payload control threads have been joined
[2025-11-30 06:41:00] 2025-11-30 05:40:31,037 | INFO     | all job control threads have been joined
[2025-11-30 06:41:00] 2025-11-30 05:40:31,374 | INFO     | all data control threads have been joined
[2025-11-30 06:41:00] 2025-11-30 05:40:31,404 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 06:41:00] 2025-11-30 05:40:31,522 | INFO     | [job] retrieve thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:31,522 | INFO     | [job] queue monitor thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:31,731 | INFO     | [job] job monitor thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:31,837 | INFO     | [payload] control thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:31,970 | INFO     | [job] validate thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,042 | INFO     | [job] control thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,047 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,324 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,376 | INFO     | [data] control thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,627 | INFO     | [data] copytool_in thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:32,834 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:33,045 | INFO     | [payload] validate_post thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:33,093 | INFO     | [payload] failed_post thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:33,409 | INFO     | [data] copytool_out thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:34,522 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:40,867 | INFO     | job.realtimelogging is not enabled
[2025-11-30 06:41:00] 2025-11-30 05:40:41,873 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 06:41:00] 2025-11-30 05:40:49,905 | INFO     | [monitor] cgroup control has ended
[2025-11-30 06:41:00] 2025-11-30 05:40:51,995 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456065021696)>']
[2025-11-30 06:41:00] 2025-11-30 05:40:57,020 | INFO     | all workflow threads have been joined
[2025-11-30 06:41:00] 2025-11-30 05:40:57,020 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 06:41:00] 2025-11-30 05:40:57,020 | INFO     | traces error code: 0
[2025-11-30 06:41:00] 2025-11-30 05:40:57,020 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | INFO     | PID=2215 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR -
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | INFO     | .. there are 4 such processes running
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 06:41:00] 2025-11-30 05:41:00,649 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 06:41:00] 2025-11-30 05:41:00,650 | INFO     | [monitor] control thread has ended
[2025-11-30 06:41:00] 2025-11-30 05:41:00,703 [wrapper] ==== pilot stdout END ====
[2025-11-30 06:41:00] 2025-11-30 05:41:00,704 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 06:41:00] 2025-11-30 05:41:00,706 [wrapper] pilotpid: 2215
[2025-11-30 06:41:00] 2025-11-30 05:41:00,707 [wrapper] Pilot exit status: 0
[2025-11-30 06:41:00] 2025-11-30 05:41:00,711 [wrapper] pandaids: 6899133436
[2025-11-30 06:41:00] 2025-11-30 05:41:00,734 [wrapper] cleanup supervisor_pilot  3283 2216
[2025-11-30 06:41:00] 2025-11-30 05:41:00,736 [wrapper] Test setup, not cleaning
[2025-11-30 06:41:00] 2025-11-30 05:41:00,737 [wrapper] apfmon messages muted
[2025-11-30 06:41:00] 2025-11-30 05:41:00,738 [wrapper] ==== wrapper stdout END ====
[2025-11-30 06:41:00] 2025-11-30 05:41:00,739 [wrapper] ==== wrapper stderr END ====
[2025-11-30 06:41:00]  *** Error codes and diagnostics ***
[2025-11-30 06:41:00]     "exeErrorCode": 0,
[2025-11-30 06:41:00]     "exeErrorDiag": "",
[2025-11-30 06:41:00]     "pilotErrorCode": 0,
[2025-11-30 06:41:00]     "pilotErrorDiag": "",
[2025-11-30 06:41:00]  *** Listing of results directory ***
[2025-11-30 06:41:00] total 1058300
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user    576529 Nov 28 23:41 pilot3.tar.gz
[2025-11-30 06:41:00] -rwx------ 1 mf493845 unix-user     36292 Nov 28 23:43 runpilot2-wrapper.sh
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      5112 Nov 28 23:43 queuedata.json
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       100 Nov 30 00:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 06:41:00] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 30 00:59 run_atlas
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       105 Nov 30 00:59 job.xml
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user 376271856 Nov 30 02:35 EVNT.47531050._000500.pool.root.1
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 02:35 start_atlas.sh
[2025-11-30 06:41:00] drwxrwx--x 2 mf493845 unix-user       100 Nov 30 02:35 shared
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user    590121 Nov 30 02:35 input.tar.gz
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      6392 Nov 30 02:35 init_data.xml
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user         0 Nov 30 02:35 boinc_setup_complete
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      8192 Nov 30 02:35 boinc_mmap_file
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user         0 Nov 30 02:35 boinc_lockfile
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      2880 Nov 30 02:35 pandaJob.out
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user    991828 Nov 30 02:35 agis_schedconf.cvmfs.json
[2025-11-30 06:41:00] drwx------ 5 mf493845 unix-user       440 Nov 30 02:35 pilot3
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user        95 Nov 30 06:40 pilot_heartbeat.json
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user 695946379 Nov 30 06:40 HITS.47531058._001180.pool.root.1
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      1030 Nov 30 06:40 memory_monitor_summary.json
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user   1516240 Nov 30 06:40 agis_ddmendpoints.agis.ALL.json
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user   1638361 Nov 30 06:40 log.47531058._001180.job.log.tgz.1
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user     27213 Nov 30 06:40 heartbeat.json
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       819 Nov 30 06:41 pilotlog.txt
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user   2140819 Nov 30 06:41 log.47531058._001180.job.log.1
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       353 Nov 30 06:41 output.list
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       620 Nov 30 06:41 runtime_log
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user   3819520 Nov 30 06:41 result.tar.gz
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user      9221 Nov 30 06:41 runtime_log.err
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user       651 Nov 30 06:41 etaLDmUMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmmRLKDmRwnsTm.diag
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user     21685 Nov 30 06:41 stderr.txt
[2025-11-30 06:41:00] HITS file was successfully produced:
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user 695946379 Nov 30 06:40 shared/HITS.pool.root.1
[2025-11-30 06:41:00]  *** Contents of shared directory: ***
[2025-11-30 06:41:00] total 1051420
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user 376271856 Nov 30 02:35 ATLAS.root_0
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 02:35 start_atlas.sh
[2025-11-30 06:41:00] -rw-r--r-- 2 mf493845 unix-user    590121 Nov 30 02:35 input.tar.gz
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user 695946379 Nov 30 06:40 HITS.pool.root.1
[2025-11-30 06:41:00] -rw------- 1 mf493845 unix-user   3819520 Nov 30 06:41 result.tar.gz
06:41:02 (29667): run_atlas exited; CPU time 100641.821336
06:41:02 (29667): called boinc_finish(0)

</stderr_txt>
]]>

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