Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
15:44:17 (502748): wrapper (7.7.26015): starting
15:44:17 (502748): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 15:44:17] Arguments: --nthreads 12
[2025-11-29 15:44:17] Threads: 12
[2025-11-29 15:44:17] Checking for CVMFS
[2025-11-29 15:44:17] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 15:44:18] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 15:44:18] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 15:44:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 15:44:21] 2.11.5.0 394429 33063 222644 153461 1 122 28140205 45568000 16851 130560 0 253705699 99.750 179813854 21901 http://cvmfs-s1bnl.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://206.12.9.162:3129 1
[2025-11-29 15:44:21] CVMFS is ok
[2025-11-29 15:44:21] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 15:44:21] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 15:44:21] Further information can be found at the LHC@home message board.
[2025-11-29 15:44:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 15:44:21] Checking for apptainer binary...
[2025-11-29 15:44:21] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 15:44:21] Running /usr/bin/apptainer --version
[2025-11-29 15:44:21] apptainer version 1.4.1-1.el9
[2025-11-29 15:44:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 15:44:22] wns0074.triumf.lcg
[2025-11-29 15:44:22] apptainer works
[2025-11-29 15:44:23] Set ATHENA_PROC_NUMBER=12
[2025-11-29 15:44:23] Set ATHENA_CORE_NUMBER=12
[2025-11-29 15:44:23] Starting ATLAS job with PandaID=6897835422
[2025-11-29 15:44:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 15:56:42]  *** The last 200 lines of the pilot log: ***
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | WARNING  | wrong length of table data, x=[1764460136.0, 1764460197.0, 1764460258.0, 1764460319.0, 1764460380.0], y=[1828.0, 52387.0, 681342.0, 328851.0, 223882.0] (must be sa
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | INFO     | could have reported an average CPU frequency of 1411 MHz (4 samples)
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . Timing measurements:
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . get job = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . initial setup = 7 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload setup = 76 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-in = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload execution = 296 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-out = 2 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,973 | INFO     | . log creation = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897835422/pilotlog.txt
[2025-11-29 15:56:42] 2025-11-29 23:55:54,046 | WARNING  | detected the following tail of warning/fatal messages in the pilot log:
[2025-11-29 15:56:42] - Log from pilotlog.txt -
[2025-11-29 15:56:42] 2025-11-29 23:55:53,961 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897835422/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | INFO     | extracted standard info from prmon json
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 15:56:42] 2025-11-29 23:55:53,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 15:56:42] 2025-11-29 23:55:53,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | WARNING  | wrong length of table data, x=[1764460136.0, 1764460197.0, 1764460258.0, 1764460319.0, 1764460380.0], y=[1828.0, 52387.0, 681342.0, 328851.0, 223882.0] (must be sa
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | INFO     | could have reported an average CPU frequency of 1411 MHz (4 samples)
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . Timing measurements:
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . get job = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . initial setup = 7 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload setup = 76 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-in = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload execution = 296 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-out = 2 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,973 | INFO     | . log creation = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897835422/pilotlog.txt
[2025-11-29 15:56:42] 2025-11-29 23:55:54,047 | WARNING  | 
[2025-11-29 15:56:42] [begin log extracts]
[2025-11-29 15:56:42] - Log from pilotlog.txt -
[2025-11-29 15:56:42] 2025-11-29 23:55:53,961 | INFO     | using path: /home/boinc/slots/0/PanDA_Pilot-6897835422/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | INFO     | extracted standard info from prmon json
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 15:56:42] 2025-11-29 23:55:53,966 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 15:56:42] 2025-11-29 23:55:53,967 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-11-29 15:56:42] 2025-11-29 23:55:53,967 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | WARNING  | wrong length of table data, x=[1764460136.0, 1764460197.0, 1764460258.0, 1764460319.0, 1764460380.0], y=[1828.0, 52387.0, 681342.0, 328851.0, 223882.0] (must be sa
[2025-11-29 15:56:42] 2025-11-29 23:55:53,968 | INFO     | could have reported an average CPU frequency of 1411 MHz (4 samples)
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . Timing measurements:
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . get job = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . initial setup = 7 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload setup = 76 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-in = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . payload execution = 296 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,969 | INFO     | . stage-out = 2 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,973 | INFO     | . log creation = 0 s
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | ..............................
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | building log extracts (sent to the server as 'pilotLog')
[2025-11-29 15:56:42] 2025-11-29 23:55:53,974 | INFO     | executing command: tail -n 20 /home/boinc/slots/0/PanDA_Pilot-6897835422/pilotlog.txt
[2025-11-29 15:56:42] [end log extracts]
[2025-11-29 15:56:42] 2025-11-29 23:55:54,047 | WARNING  | pilotErrorCodes = [1305, 1165] (will report primary/first error code)
[2025-11-29 15:56:42] 2025-11-29 23:55:54,048 | WARNING  | pilotErrorDiags = ['Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return c
[2025-11-29 15:56:42] 2025-11-29 23:55:54,413 | INFO     | time since job start (621s) is within the limit (172800.0s)
[2025-11-29 15:56:42] 2025-11-29 23:55:54,916 | INFO     | 
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | job summary report
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | --------------------------------------------------
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | PanDA job id: 6897835422
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | task id: 47530783
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | error 1/2: 1305: Failed to execute payload:PyJobTransforms.transform.execute 2025-11-29 15:52:58,687 CRITICAL Transform executor raised TransformValidationExceptio
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | error 2/2: 1165: Local output file is missing
[2025-11-29 15:56:42] 2025-11-29 23:55:54,918 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | pilot state: failed 
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | transexitcode: 65
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | exeerrorcode: 65
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | exeerrordiag: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFL
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | exitcode: 65
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | exitmsg: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: "IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | cpuconsumptiontime: 108 s
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | nevents: 0
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | neventsw: 0
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | pid: 523350
[2025-11-29 15:56:42] 2025-11-29 23:55:54,919 | INFO     | pgrp: 523350
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | corecount: 12
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | event service: False
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | sizes: {0: 2284214, 1: 2284298, 2: 2284469, 3: 2284497, 4: 2284525, 16: 2284553, 27: 2284709, 36: 2284999, 38: 2285027, 374: 2308795, 375: 2308799, 378: 2313425, 3
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | --------------------------------------------------
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | 
[2025-11-29 15:56:42] 2025-11-29 23:55:54,920 | INFO     | executing command: ls -lF /home/boinc/slots/0
[2025-11-29 15:56:42] 2025-11-29 23:55:55,042 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 15:56:42] 2025-11-29 23:55:55,044 | INFO     | job 6897835422 has completed (purged errors)
[2025-11-29 15:56:42] 2025-11-29 23:55:55,045 | INFO     | overall cleanup function is called
[2025-11-29 15:56:42] 2025-11-29 23:55:56,057 | INFO     | --- collectZombieJob: --- 10, [523350]
[2025-11-29 15:56:42] 2025-11-29 23:55:56,058 | INFO     | zombie collector waiting for pid 523350
[2025-11-29 15:56:42] 2025-11-29 23:55:56,058 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 15:56:42] 2025-11-29 23:55:56,058 | INFO     | collected zombie processes
[2025-11-29 15:56:42] 2025-11-29 23:55:56,058 | INFO     | will attempt to kill all subprocesses of pid=523350
[2025-11-29 15:56:42] 2025-11-29 23:55:58,391 | INFO     | process IDs to be killed: [523350] (in reverse order)
[2025-11-29 15:56:42] 2025-11-29 23:55:58,833 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 15:56:42] 2025-11-29 23:55:58,833 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 15:56:42] 2025-11-29 23:55:58,881 | INFO     | did not find any defunct processes belonging to 523350
[2025-11-29 15:56:42] 2025-11-29 23:55:58,951 | INFO     | did not find any defunct processes belonging to 523350
[2025-11-29 15:56:42] 2025-11-29 23:55:58,952 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 15:56:42] 2025-11-29 23:55:58,953 | INFO     | ready for new job
[2025-11-29 15:56:42] 2025-11-29 23:55:58,953 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 15:56:42] 2025-11-29 23:55:58,960 | INFO     | ***************************************
[2025-11-29 15:56:42] 2025-11-29 23:55:58,961 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 15:56:42] 2025-11-29 23:55:58,961 | INFO     | ***************************************
[2025-11-29 15:56:42] 2025-11-29 23:55:58,961 | INFO     | 
[2025-11-29 15:56:42] 2025-11-29 23:55:58,964 | INFO     | architecture information:
[2025-11-29 15:56:42] 2025-11-29 23:55:58,984 | INFO     | executing command: cat /etc/os-release
[2025-11-29 15:56:42] 2025-11-29 23:55:59,027 | INFO     | cat /etc/os-release:
[2025-11-29 15:56:42] NAME="CentOS Linux"
[2025-11-29 15:56:42] VERSION="7 (Core)"
[2025-11-29 15:56:42] ID="centos"
[2025-11-29 15:56:42] ID_LIKE="rhel fedora"
[2025-11-29 15:56:42] VERSION_ID="7"
[2025-11-29 15:56:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 15:56:42] ANSI_COLOR="0;31"
[2025-11-29 15:56:42] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 15:56:42] HOME_URL="https://www.centos.org/"
[2025-11-29 15:56:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 15:56:42] 
[2025-11-29 15:56:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 15:56:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 15:56:42] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 15:56:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 15:56:42] 
[2025-11-29 15:56:42] 2025-11-29 23:55:59,027 | INFO     | ***************************************
[2025-11-29 15:56:42] 2025-11-29 23:55:59,532 | INFO     | executing command: df -mP /home/boinc/slots/0
[2025-11-29 15:56:42] 2025-11-29 23:55:59,641 | INFO     | sufficient remaining disk space (2064924016640 B)
[2025-11-29 15:56:42] 2025-11-29 23:55:59,642 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 15:56:42] 2025-11-29 23:55:59,642 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 15:56:42] 2025-11-29 23:55:59,642 | INFO     | update_server=False
[2025-11-29 15:56:42] 2025-11-29 23:55:59,642 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 15:56:42] 2025-11-29 23:55:59,643 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:56:42] 2025-11-29 23:55:59,643 | INFO     | aborting loop
[2025-11-29 15:56:42] 2025-11-29 23:55:59,649 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:56:42] 2025-11-29 23:55:59,936 | INFO     | all payload control threads have been joined
[2025-11-29 15:56:42] 2025-11-29 23:56:00,125 | INFO     | all job control threads have been joined
[2025-11-29 15:56:42] 2025-11-29 23:56:00,525 | INFO     | all data control threads have been joined
[2025-11-29 15:56:42] 2025-11-29 23:56:00,649 | INFO     | [job] job monitor thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,653 | INFO     | [job] retrieve thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,657 | INFO     | [job] queue monitor thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,691 | INFO     | [payload] validate_post thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,701 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 15:56:42] 2025-11-29 23:56:00,756 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,848 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,862 | INFO     | [payload] failed_post thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:00,942 | INFO     | [payload] control thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,101 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,132 | INFO     | [job] control thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,532 | INFO     | [data] control thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,712 | INFO     | [data] copytool_in thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,803 | INFO     | [job] validate thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:01,970 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:02,228 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 15:56:42] 2025-11-29 23:56:02,718 | INFO     | [data] copytool_out thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:06,247 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 15:56:42] 2025-11-29 23:56:28,004 | INFO     | PID=507360 has CPU usage=2.5% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-29 15:56:42] 2025-11-29 23:56:28,005 | INFO     | .. there are 42 such processes running
[2025-11-29 15:56:42] 2025-11-29 23:56:28,005 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 15:56:42] 2025-11-29 23:56:28,005 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 15:56:42] 2025-11-29 23:56:28,005 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 15:56:42] 2025-11-29 23:56:33,719 | INFO     | [monitor] cgroup control has ended
[2025-11-29 15:56:42] 2025-11-29 23:56:35,521 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139817607632704)>', '<ExcThread(monitor, started 139817056712448)>']
[2025-11-29 15:56:42] 2025-11-29 23:56:36,052 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 15:56:42] 2025-11-29 23:56:36,053 | INFO     | [monitor] control thread has ended
[2025-11-29 15:56:42] 2025-11-29 23:56:40,546 | INFO     | all workflow threads have been joined
[2025-11-29 15:56:42] 2025-11-29 23:56:40,547 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 15:56:42] 2025-11-29 23:56:40,547 | INFO     | traces error code: 0
[2025-11-29 15:56:42] 2025-11-29 23:56:40,548 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 15:56:42] 2025-11-29 23:56:41,249 [wrapper] ==== pilot stdout END ====
[2025-11-29 15:56:42] 2025-11-29 23:56:41,253 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 15:56:42] 2025-11-29 23:56:41,256 [wrapper] pilotpid: 507360
[2025-11-29 15:56:42] 2025-11-29 23:56:41,259 [wrapper] Pilot exit status: 0
[2025-11-29 15:56:42] 2025-11-29 23:56:41,349 [wrapper] pandaids: 6897835422
[2025-11-29 15:56:42] 2025-11-29 23:56:41,775 [wrapper] cleanup supervisor_pilot  507374 507361
[2025-11-29 15:56:42] 2025-11-29 23:56:41,820 [wrapper] Test setup, not cleaning
[2025-11-29 15:56:42] 2025-11-29 23:56:41,832 [wrapper] apfmon messages muted
[2025-11-29 15:56:42] 2025-11-29 23:56:41,849 [wrapper] ==== wrapper stdout END ====
[2025-11-29 15:56:42] 2025-11-29 23:56:41,867 [wrapper] ==== wrapper stderr END ====
[2025-11-29 15:56:42]  *** Error codes and diagnostics ***
[2025-11-29 15:56:42]     "exeErrorCode": 65,
[2025-11-29 15:56:42]     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 cannot be opened - STOP\"",
[2025-11-29 15:56:42]     "pilotErrorCode": 1305,
[2025-11-29 15:56:42]     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute  CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (33); Logfile error in log.EVNTtoHITS: \"IOVDbSvc            FATAL Conditions database connection COOLOFL_TRT/OFLP200 canno",
[2025-11-29 15:56:42]  *** Listing of results directory ***
[2025-11-29 15:56:42] total 372228
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc    576529 Nov 28 14:41 pilot3.tar.gz
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc      5112 Nov 28 14:41 queuedata.json
[2025-11-29 15:56:42] -rwx------. 1 boinc boinc     36292 Nov 28 14:43 runpilot2-wrapper.sh
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc       100 Nov 29 15:44 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 15:56:42] -rwxr-xr-x. 1 boinc boinc      7986 Nov 29 15:44 run_atlas
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc       105 Nov 29 15:44 job.xml
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc      6596 Nov 29 15:44 init_data.xml
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc 376861167 Nov 29 15:44 EVNT.47530775._000049.pool.root.1
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc     15847 Nov 29 15:44 start_atlas.sh
[2025-11-29 15:56:42] drwxrwx--x. 2 boinc boinc      4096 Nov 29 15:44 shared
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc    590119 Nov 29 15:44 input.tar.gz
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc         0 Nov 29 15:44 boinc_lockfile
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc      2876 Nov 29 15:44 pandaJob.out
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc    991826 Nov 29 15:45 agis_schedconf.cvmfs.json
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc   1516240 Nov 29 15:45 agis_ddmendpoints.agis.ALL.json
[2025-11-29 15:56:42] drwx------. 5 boinc boinc      4096 Nov 29 15:45 pilot3
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc       524 Nov 29 15:51 boinc_task_state.xml
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc       999 Nov 29 15:53 memory_monitor_summary.json
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc     54332 Nov 29 15:53 log.47530783._000481.job.log.tgz.1
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc        95 Nov 29 15:55 pilot_heartbeat.json
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc      9937 Nov 29 15:55 heartbeat.json
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc      8192 Nov 29 15:56 boinc_mmap_file
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc      4822 Nov 29 15:56 pilotlog.txt
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc        23 Nov 29 15:56 wrapper_checkpoint.txt
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc    135771 Nov 29 15:56 log.47530783._000481.job.log.1
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc       186 Nov 29 15:56 output.list
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc       620 Nov 29 15:56 runtime_log
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc    215040 Nov 29 15:56 result.tar.gz
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc       645 Nov 29 15:56 uuqKDmLMMj8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmTRLKDmtCwcHm.diag
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc      8636 Nov 29 15:56 runtime_log.err
[2025-11-29 15:56:42] -rw-r--r--. 1 boinc boinc     22706 Nov 29 15:56 stderr.txt
[2025-11-29 15:56:42] No HITS result produced
[2025-11-29 15:56:42]  *** Contents of shared directory: ***
[2025-11-29 15:56:42] total 368840
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc 376861167 Nov 29 15:44 ATLAS.root_0
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc     15847 Nov 29 15:44 start_atlas.sh
[2025-11-29 15:56:42] -rw-r--r--. 2 boinc boinc    590119 Nov 29 15:44 input.tar.gz
[2025-11-29 15:56:42] -rw-------. 1 boinc boinc    215040 Nov 29 15:56 result.tar.gz
15:56:44 (502748): run_atlas exited; CPU time 124.355277
15:56:44 (502748): called boinc_finish(0)

</stderr_txt>
]]>

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