Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:23:40 (13481): wrapper (7.7.26015): starting
18:23:40 (13481): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 18:23:40] Arguments: --nthreads 8
[2025-12-01 18:23:40] Threads: 8
[2025-12-01 18:23:40] Checking for CVMFS
[2025-12-01 18:23:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 18:23:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 18:23:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 18:23:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 18:23:43] 2.11.2.0 2048 179671 137408 153527 3 84 23247188 25165825 2504 130560 10 60390256 99.873 34029409 2170 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 18:23:43] CVMFS is ok
[2025-12-01 18:23:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 18:23:43] Checking for apptainer binary...
[2025-12-01 18:23:43] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 18:23:43] Running /usr/bin/apptainer --version
[2025-12-01 18:23:43] apptainer version 1.3.2-1.el7
[2025-12-01 18:23:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 18:23:48] cg-vwn398.simple-grid.lan
[2025-12-01 18:23:48] apptainer works
[2025-12-01 18:23:48] Set ATHENA_PROC_NUMBER=8
[2025-12-01 18:23:48] Set ATHENA_CORE_NUMBER=8
[2025-12-01 18:23:48] Starting ATLAS job with PandaID=6893848607
[2025-12-01 18:23:48] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/11 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 18:09:32]  *** The last 200 lines of the pilot log: ***
[2025-12-02 18:09:32] 2025-12-02 17:08:59,855 | INFO     | sum of deviations: 4475222980323.597
[2025-12-02 18:09:32] 2025-12-02 17:08:59,855 | INFO     | mean x: 1764652941.605036
[2025-12-02 18:09:32] 2025-12-02 17:08:59,855 | INFO     | mean y: 2861429.28705036
[2025-12-02 18:09:32] 2025-12-02 17:08:59,855 | INFO     | intersect: -9480237894.882324
[2025-12-02 18:09:32] 2025-12-02 17:08:59,857 | INFO     | chi2: 17.00405196947329
[2025-12-02 18:09:32] 2025-12-02 17:08:59,859 | INFO     | sum of square deviations: 823813417054.537
[2025-12-02 18:09:32] 2025-12-02 17:08:59,927 | INFO     | sum of deviations: 4952693624293.566
[2025-12-02 18:09:32] 2025-12-02 17:08:59,927 | INFO     | mean x: 1764652789.1090252
[2025-12-02 18:09:32] 2025-12-02 17:08:59,928 | INFO     | mean y: 2869560.810830325
[2025-12-02 18:09:32] 2025-12-02 17:08:59,928 | INFO     | intersect: -10606067410.573248
[2025-12-02 18:09:32] 2025-12-02 17:08:59,929 | INFO     | chi2: 13.787988464008247
[2025-12-02 18:09:32] 2025-12-02 17:08:59,930 | INFO     | current chi2=13.787988464008247 (change=18.913512562998026 %)
[2025-12-02 18:09:32] 2025-12-02 17:08:59,930 | INFO     | right removable region: 1384
[2025-12-02 18:09:32] 2025-12-02 17:08:59,932 | INFO     | sum of square deviations: 823812480094.5371
[2025-12-02 18:09:32] 2025-12-02 17:08:59,985 | INFO     | sum of deviations: 3884977731502.432
[2025-12-02 18:09:32] 2025-12-02 17:08:59,985 | INFO     | mean x: 1764653094.1090252
[2025-12-02 18:09:32] 2025-12-02 17:08:59,985 | INFO     | mean y: 2871480.8050541515
[2025-12-02 18:09:32] 2025-12-02 17:08:59,985 | INFO     | intersect: -8318971341.549016
[2025-12-02 18:09:32] 2025-12-02 17:08:59,987 | INFO     | chi2: 12.109263202678262
[2025-12-02 18:09:32] 2025-12-02 17:08:59,987 | INFO     | current chi2=12.109263202678262 (change=28.786013919402574 %)
[2025-12-02 18:09:32] 2025-12-02 17:08:59,989 | INFO     | sum of square deviations: 814922040273.3646
[2025-12-02 18:09:32] 2025-12-02 17:09:00,044 | INFO     | sum of deviations: 3364505829363.5605
[2025-12-02 18:09:32] 2025-12-02 17:09:00,044 | INFO     | mean x: 1764653246.6130435
[2025-12-02 18:09:32] 2025-12-02 17:09:00,044 | INFO     | mean y: 2880407.9355072463
[2025-12-02 18:09:32] 2025-12-02 17:09:00,045 | INFO     | intersect: -7282707466.265682
[2025-12-02 18:09:32] 2025-12-02 17:09:00,046 | INFO     | chi2: 8.43215559749489
[2025-12-02 18:09:32] 2025-12-02 17:09:00,046 | INFO     | current chi2=8.43215559749489 (change=30.366072184888083 %)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,048 | INFO     | sum of square deviations: 806095787702.1466
[2025-12-02 18:09:32] 2025-12-02 17:09:00,100 | INFO     | sum of deviations: 2903563389696.3174
[2025-12-02 18:09:32] 2025-12-02 17:09:00,100 | INFO     | mean x: 1764653399.117091
[2025-12-02 18:09:32] 2025-12-02 17:09:00,100 | INFO     | mean y: 2888373.0290909093
[2025-12-02 18:09:32] 2025-12-02 17:09:00,100 | INFO     | intersect: -6353407098.735355
[2025-12-02 18:09:32] 2025-12-02 17:09:00,102 | INFO     | chi2: 5.624683307004155
[2025-12-02 18:09:32] 2025-12-02 17:09:00,102 | INFO     | current chi2=5.624683307004155 (change=33.294834968709644 %)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,104 | INFO     | sum of square deviations: 797333740835.1061
[2025-12-02 18:09:32] 2025-12-02 17:09:00,155 | INFO     | sum of deviations: 2637729273944.922
[2025-12-02 18:09:32] 2025-12-02 17:09:00,155 | INFO     | mean x: 1764653551.618978
[2025-12-02 18:09:32] 2025-12-02 17:09:00,155 | INFO     | mean y: 2892995.1569343065
[2025-12-02 18:09:32] 2025-12-02 17:09:00,156 | INFO     | intersect: -5834911293.17165
[2025-12-02 18:09:32] 2025-12-02 17:09:00,157 | INFO     | chi2: 4.53327595605194
[2025-12-02 18:09:32] 2025-12-02 17:09:00,158 | INFO     | current chi2=4.53327595605194 (change=19.403889808216164 %)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,158 | INFO     | left removable region: 40
[2025-12-02 18:09:32] 2025-12-02 17:09:00,160 | INFO     | sum of square deviations: 752795117648.4736
[2025-12-02 18:09:32] 2025-12-02 17:09:00,218 | INFO     | sum of deviations: 2894644461329.4053
[2025-12-02 18:09:32] 2025-12-02 17:09:00,218 | INFO     | mean x: 1764653978.6205356
[2025-12-02 18:09:32] 2025-12-02 17:09:00,219 | INFO     | mean y: 2906990.1086309524
[2025-12-02 18:09:32] 2025-12-02 17:09:00,219 | INFO     | intersect: -6782532694.108467
[2025-12-02 18:09:32] 2025-12-02 17:09:00,220 | INFO     | chi2: 0.9562532046246421
[2025-12-02 18:09:32] 2025-12-02 17:09:00,221 | INFO     | current memory leak: 3.85 B/s (using 1344 data points, chi2=0.96)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,222 | INFO     | could have reported an average CPU frequency of 1999 MHz (47 samples)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,222 | INFO     | ..............................
[2025-12-02 18:09:32] 2025-12-02 17:09:00,222 | INFO     | . Timing measurements:
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . get job = 0 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . initial setup = 7 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . payload setup = 160 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . stage-in = 0 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . payload execution = 84909 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . stage-out = 3 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | . log creation = 0 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,223 | INFO     | ..............................
[2025-12-02 18:09:32] 2025-12-02 17:09:00,696 | INFO     | 
[2025-12-02 18:09:32] 2025-12-02 17:09:00,696 | INFO     | job summary report
[2025-12-02 18:09:32] 2025-12-02 17:09:00,696 | INFO     | --------------------------------------------------
[2025-12-02 18:09:32] 2025-12-02 17:09:00,696 | INFO     | PanDA job id: 6893848607
[2025-12-02 18:09:32] 2025-12-02 17:09:00,696 | INFO     | task id: 47523449
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | errors: (none)
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | pilot state: finished 
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | transexitcode: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | exeerrorcode: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | exeerrordiag: 
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | exitcode: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | exitmsg: OK
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | cpuconsumptiontime: 320416 s
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | nevents: 1000
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | neventsw: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:00,697 | INFO     | pid: 23863
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | pgrp: 23863
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | corecount: 8
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | event service: False
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | sizes: {0: 2283487, 1: 2284173, 2: 2284372, 13: 2284372, 24: 2284428, 34: 2284456, 45: 2284612, 56: 2284640, 66: 2284668, 77: 2284696, 88: 2284752, 96: 2285322, 99
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | --------------------------------------------------
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | 
[2025-12-02 18:09:32] 2025-12-02 17:09:00,698 | INFO     | executing command: ls -lF /var/lib/boinc/slots/11
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,015 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,016 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | job 6893848607 has completed (purged errors)
[2025-12-02 18:09:32] 2025-12-02 17:09:01,017 | INFO     | overall cleanup function is called
[2025-12-02 18:09:32] 2025-12-02 17:09:02,034 | INFO     | --- collectZombieJob: --- 10, [23863]
[2025-12-02 18:09:32] 2025-12-02 17:09:02,034 | INFO     | zombie collector waiting for pid 23863
[2025-12-02 18:09:32] 2025-12-02 17:09:02,034 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 18:09:32] 2025-12-02 17:09:02,034 | INFO     | collected zombie processes
[2025-12-02 18:09:32] 2025-12-02 17:09:02,035 | INFO     | will attempt to kill all subprocesses of pid=23863
[2025-12-02 18:09:32] 2025-12-02 17:09:02,129 | INFO     | process IDs to be killed: [23863] (in reverse order)
[2025-12-02 18:09:32] 2025-12-02 17:09:02,203 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 18:09:32] 2025-12-02 17:09:02,203 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 18:09:32] 2025-12-02 17:09:02,207 | INFO     | did not find any defunct processes belonging to 23863
[2025-12-02 18:09:32] 2025-12-02 17:09:02,210 | INFO     | did not find any defunct processes belonging to 23863
[2025-12-02 18:09:32] 2025-12-02 17:09:02,216 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 18:09:32] 2025-12-02 17:09:02,217 | INFO     | ready for new job
[2025-12-02 18:09:32] 2025-12-02 17:09:02,217 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 18:09:32] 2025-12-02 17:09:02,222 | INFO     | ***************************************
[2025-12-02 18:09:32] 2025-12-02 17:09:02,222 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 18:09:32] 2025-12-02 17:09:02,222 | INFO     | ***************************************
[2025-12-02 18:09:32] 2025-12-02 17:09:02,222 | INFO     | 
[2025-12-02 18:09:32] 2025-12-02 17:09:02,223 | INFO     | pilot is running in a VM
[2025-12-02 18:09:32] 2025-12-02 17:09:02,223 | INFO     | architecture information:
[2025-12-02 18:09:32] 2025-12-02 17:09:02,224 | INFO     | executing command: cat /etc/os-release
[2025-12-02 18:09:32] 2025-12-02 17:09:02,276 | INFO     | cat /etc/os-release:
[2025-12-02 18:09:32] NAME="CentOS Linux"
[2025-12-02 18:09:32] VERSION="7 (Core)"
[2025-12-02 18:09:32] ID="centos"
[2025-12-02 18:09:32] ID_LIKE="rhel fedora"
[2025-12-02 18:09:32] VERSION_ID="7"
[2025-12-02 18:09:32] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 18:09:32] ANSI_COLOR="0;31"
[2025-12-02 18:09:32] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 18:09:32] HOME_URL="https://www.centos.org/"
[2025-12-02 18:09:32] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 18:09:32] 
[2025-12-02 18:09:32] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 18:09:32] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 18:09:32] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 18:09:32] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 18:09:32] 
[2025-12-02 18:09:32] 2025-12-02 17:09:02,277 | INFO     | ***************************************
[2025-12-02 18:09:32] 2025-12-02 17:09:02,779 | INFO     | executing command: df -mP /var/lib/boinc/slots/11
[2025-12-02 18:09:32] 2025-12-02 17:09:02,802 | INFO     | sufficient remaining disk space (491086938112 B)
[2025-12-02 18:09:32] 2025-12-02 17:09:02,803 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 18:09:32] 2025-12-02 17:09:02,803 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 18:09:32] 2025-12-02 17:09:02,803 | INFO     | update_server=False
[2025-12-02 18:09:32] 2025-12-02 17:09:02,803 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 18:09:32] 2025-12-02 17:09:02,803 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 18:09:32] 2025-12-02 17:09:02,882 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-12-02 18:09:32] 2025-12-02 17:09:02,882 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-12-02 18:09:32] 2025-12-02 17:09:02,882 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 18:09:32] 2025-12-02 17:09:02,883 | INFO     | will abort loop
[2025-12-02 18:09:32] 2025-12-02 17:09:02,990 | INFO     | all data control threads have been joined
[2025-12-02 18:09:32] 2025-12-02 17:09:03,056 | INFO     | all job control threads have been joined
[2025-12-02 18:09:32] 2025-12-02 17:09:03,334 | INFO     | all payload control threads have been joined
[2025-12-02 18:09:32] 2025-12-02 17:09:03,809 | INFO     | [job] retrieve thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:03,888 | INFO     | [job] job monitor thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:03,995 | INFO     | [data] control thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,062 | INFO     | [job] control thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,314 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,339 | INFO     | [payload] control thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,346 | INFO     | [job] validate thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,636 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,659 | INFO     | [data] copytool_in thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,769 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,779 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 18:09:32] 2025-12-02 17:09:04,810 | INFO     | [data] copytool_out thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:04,952 | INFO     | [payload] validate_post thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:05,215 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:05,352 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 18:09:32] 2025-12-02 17:09:05,362 | INFO     | [payload] failed_post thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:06,358 | INFO     | [job] queue monitor thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:08,786 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 18:09:32] 2025-12-02 17:09:21,425 | INFO     | [monitor] cgroup control has ended
[2025-12-02 18:09:32] 2025-12-02 17:09:22,024 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140384431413056)>', '<ExcThread(monitor, started 140384000788224)>']
[2025-12-02 18:09:32] 2025-12-02 17:09:27,050 | INFO     | all workflow threads have been joined
[2025-12-02 18:09:32] 2025-12-02 17:09:27,050 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 18:09:32] 2025-12-02 17:09:27,051 | INFO     | traces error code: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:27,051 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 18:09:32] 2025-12-02 17:09:32,456 | INFO     | PID=17272 has CPU usage=2.3% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-02 18:09:32] 2025-12-02 17:09:32,456 | INFO     | .. there are 9 such processes running
[2025-12-02 18:09:32] 2025-12-02 17:09:32,456 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 18:09:32] 2025-12-02 17:09:32,457 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 18:09:32] 2025-12-02 17:09:32,457 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 18:09:32] 2025-12-02 17:09:32,457 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 18:09:32] 2025-12-02 17:09:32,457 | CRITICAL | thread 'MainThread' is not alive
[2025-12-02 18:09:32] 2025-12-02 17:09:32,457 | INFO     | [monitor] control thread has ended
[2025-12-02 18:09:32] 2025-12-02 17:09:32,590 [wrapper] ==== pilot stdout END ====
[2025-12-02 18:09:32] 2025-12-02 17:09:32,594 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 18:09:32] 2025-12-02 17:09:32,597 [wrapper] pilotpid: 17272
[2025-12-02 18:09:32] 2025-12-02 17:09:32,609 [wrapper] Pilot exit status: 0
[2025-12-02 18:09:32] 2025-12-02 17:09:32,630 [wrapper] pandaids: 6893848607
[2025-12-02 18:09:32] 2025-12-02 17:09:32,664 [wrapper] cleanup supervisor_pilot 25528 17273
[2025-12-02 18:09:32] 2025-12-02 17:09:32,678 [wrapper] Test setup, not cleaning
[2025-12-02 18:09:32] 2025-12-02 17:09:32,682 [wrapper] apfmon messages muted
[2025-12-02 18:09:32] 2025-12-02 17:09:32,690 [wrapper] ==== wrapper stdout END ====
[2025-12-02 18:09:32] 2025-12-02 17:09:32,694 [wrapper] ==== wrapper stderr END ====
[2025-12-02 18:09:32]  *** Error codes and diagnostics ***
[2025-12-02 18:09:32]     "exeErrorCode": 0,
[2025-12-02 18:09:32]     "exeErrorDiag": "",
[2025-12-02 18:09:32]     "pilotErrorCode": 0,
[2025-12-02 18:09:32]     "pilotErrorDiag": "",
[2025-12-02 18:09:32]  *** Listing of results directory ***
[2025-12-02 18:09:32] total 1335464
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc    576529 Nov 20 11:06 pilot3.tar.gz
[2025-12-02 18:09:32] -rwx------. 1 boinc boinc     36292 Nov 20 11:48 runpilot2-wrapper.sh
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc      5112 Nov 20 11:48 queuedata.json
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc       100 Dec  1 18:23 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 18:09:32] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 18:23 run_atlas
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc       105 Dec  1 18:23 job.xml
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc 410742746 Dec  1 18:23 EVNT.47493127._000283.pool.root.1
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc     15847 Dec  1 18:23 start_atlas.sh
[2025-12-02 18:09:32] drwxrwx--x. 2 boinc boinc        68 Dec  1 18:23 shared
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc    590102 Dec  1 18:23 input.tar.gz
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc      6392 Dec  1 18:23 init_data.xml
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc         0 Dec  1 18:23 boinc_lockfile
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc      2786 Dec  1 18:23 pandaJob.out
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc    991946 Dec  1 18:27 agis_schedconf.cvmfs.json
[2025-12-02 18:09:32] drwx------. 5 boinc boinc      4096 Dec  1 18:27 pilot3
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc       533 Dec  2 17:55 boinc_task_state.xml
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc 925156610 Dec  2 18:08 HITS.47523449._002823.pool.root.1
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc        95 Dec  2 18:08 pilot_heartbeat.json
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc      1033 Dec  2 18:08 memory_monitor_summary.json
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc   1516240 Dec  2 18:08 agis_ddmendpoints.agis.ALL.json
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc   2478106 Dec  2 18:08 log.47523449._002823.job.log.tgz.1
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc      8630 Dec  2 18:09 heartbeat.json
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc      8192 Dec  2 18:09 boinc_mmap_file
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc        29 Dec  2 18:09 wrapper_checkpoint.txt
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc       890 Dec  2 18:09 pilotlog.txt
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc  11380391 Dec  2 18:09 log.47523449._002823.job.log.1
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc       353 Dec  2 18:09 output.list
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc       620 Dec  2 18:09 runtime_log
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc  13875200 Dec  2 18:09 result.tar.gz
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc      8833 Dec  2 18:09 runtime_log.err
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc       662 Dec  2 18:09 O8CMDmiOHg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmtTGKDmbu1vEm.diag
[2025-12-02 18:09:32] -rw-r--r--. 1 boinc boinc     20858 Dec  2 18:09 stderr.txt
[2025-12-02 18:09:32] HITS file was successfully produced:
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc 925156610 Dec  2 18:08 shared/HITS.pool.root.1
[2025-12-02 18:09:32]  *** Contents of shared directory: ***
[2025-12-02 18:09:32] total 1318740
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc 410742746 Dec  1 18:23 ATLAS.root_0
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc     15847 Dec  1 18:23 start_atlas.sh
[2025-12-02 18:09:32] -rw-r--r--. 2 boinc boinc    590102 Dec  1 18:23 input.tar.gz
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc 925156610 Dec  2 18:08 HITS.pool.root.1
[2025-12-02 18:09:32] -rw-------. 1 boinc boinc  13875200 Dec  2 18:09 result.tar.gz
18:09:34 (13481): run_atlas exited; CPU time 321026.785128
18:09:34 (13481): called boinc_finish(0)

</stderr_txt>
]]>

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