Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
16:55:41 (439061): wrapper (7.7.26015): starting
16:55:41 (439061): wrapper: running run_atlas (--nthreads 2)
[2025-12-02 16:55:41] Arguments: --nthreads 2
[2025-12-02 16:55:41] Threads: 2
[2025-12-02 16:55:41] Checking for CVMFS
[2025-12-02 16:55:41] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 16:55:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 16:55:41] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 16:55:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 16:55:41] 2.9.2.0 2293154 20104 65708 153560 2 81 32847405 36864001 0 130560 1 6480470 99.950 877829 1322 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 16:55:41] CVMFS is ok
[2025-12-02 16:55:41] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 16:55:41] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 16:55:41] Further information can be found at the LHC@home message board.
[2025-12-02 16:55:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 16:55:41] Checking for apptainer binary...
[2025-12-02 16:55:41] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 16:55:41] Running /usr/bin/apptainer --version
[2025-12-02 16:55:41] apptainer version 1.4.1-1.1
[2025-12-02 16:55:41] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 16:55:42] belleA253a
[2025-12-02 16:55:42] apptainer works
[2025-12-02 16:55:42] Set ATHENA_PROC_NUMBER=2
[2025-12-02 16:55:42] Set ATHENA_CORE_NUMBER=2
[2025-12-02 16:55:42] Starting ATLAS job with PandaID=6900369853
[2025-12-02 16:55:42] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 04:55:00]  *** The last 200 lines of the pilot log: ***
[2025-12-03 04:55:00] 2025-12-03 03:53:56,034 | INFO     | time since job start (43081s) is within the limit (172800.0s)
[2025-12-03 04:55:00] 2025-12-03 03:53:58,040 | INFO     | time since job start (43083s) is within the limit (172800.0s)
[2025-12-03 04:55:00] 2025-12-03 03:53:58,508 | INFO     | monitor loop #3288: job 0:6900369853 is in state 'finished'
[2025-12-03 04:55:00] 2025-12-03 03:53:58,509 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,853 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 04:55:00] 2025-12-03 03:53:59,854 | INFO     | found 8 cores (8 cores per socket, 1 socket) , CPU MHz: 3487.8107499999996
[2025-12-03 04:55:00] 2025-12-03 03:53:59,854 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6900369853/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,855 | INFO     | extracted standard info from prmon json
[2025-12-03 04:55:00] 2025-12-03 03:53:59,855 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 04:55:00] 2025-12-03 03:53:59,855 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 04:55:00] 2025-12-03 03:53:59,859 | INFO     | fitting pss+swap vs Time
[2025-12-03 04:55:00] 2025-12-03 03:53:59,860 | INFO     | sum of square deviations: 109116808692.5
[2025-12-03 04:55:00] 2025-12-03 03:53:59,865 | INFO     | sum of deviations: 288400833415.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,865 | INFO     | mean x: 1764712485.5
[2025-12-03 04:55:00] 2025-12-03 03:53:59,865 | INFO     | mean y: 2017778.3031161474
[2025-12-03 04:55:00] 2025-12-03 03:53:59,865 | INFO     | intersect: -4662199931.640208
[2025-12-03 04:55:00] 2025-12-03 03:53:59,866 | INFO     | chi2: 3.7146460058089503
[2025-12-03 04:55:00] 2025-12-03 03:53:59,866 | INFO     | sum of square deviations: 106814839950.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,871 | INFO     | sum of deviations: 372458750089.0012
[2025-12-03 04:55:00] 2025-12-03 03:53:59,871 | INFO     | mean x: 1764712333.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,871 | INFO     | mean y: 2023332.5420827388
[2025-12-03 04:55:00] 2025-12-03 03:53:59,871 | INFO     | intersect: -6151452627.572627
[2025-12-03 04:55:00] 2025-12-03 03:53:59,872 | INFO     | chi2: 2.307131491642659
[2025-12-03 04:55:00] 2025-12-03 03:53:59,872 | INFO     | current chi2=2.307131491642659 (change=37.89094605421957 %)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,872 | INFO     | sum of square deviations: 104545476470.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,877 | INFO     | sum of deviations: 369994669057.99994
[2025-12-03 04:55:00] 2025-12-03 03:53:59,877 | INFO     | mean x: 1764712180.5
[2025-12-03 04:55:00] 2025-12-03 03:53:59,877 | INFO     | mean y: 2023166.9281609196
[2025-12-03 04:55:00] 2025-12-03 03:53:59,877 | INFO     | intersect: -6243432124.426148
[2025-12-03 04:55:00] 2025-12-03 03:53:59,877 | INFO     | chi2: 2.3053986294059747
[2025-12-03 04:55:00] 2025-12-03 03:53:59,878 | INFO     | current chi2=2.3053986294059747 (change=0.07510894992164302 %)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,878 | INFO     | right removable region: 695
[2025-12-03 04:55:00] 2025-12-03 03:53:59,878 | INFO     | sum of square deviations: 106814839950.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,883 | INFO     | sum of deviations: 158075392436.00003
[2025-12-03 04:55:00] 2025-12-03 03:53:59,883 | INFO     | mean x: 1764712638.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,883 | INFO     | mean y: 2026402.6790299572
[2025-12-03 04:55:00] 2025-12-03 03:53:59,883 | INFO     | intersect: -2609573660.750348
[2025-12-03 04:55:00] 2025-12-03 03:53:59,883 | INFO     | chi2: 1.7373342957834499
[2025-12-03 04:55:00] 2025-12-03 03:53:59,884 | INFO     | current chi2=1.7373342957834499 (change=53.230151861937514 %)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,884 | INFO     | sum of square deviations: 104545476470.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,888 | INFO     | sum of deviations: 123532622773.50009
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | mean x: 1764712790.5
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | mean y: 2028715.3060344828
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | intersect: -2083184407.3771224
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | chi2: 1.4945211201936242
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | current chi2=1.4945211201936242 (change=13.976191926858226 %)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | left removable region: 20
[2025-12-03 04:55:00] 2025-12-03 03:53:59,889 | INFO     | sum of square deviations: 95364950850.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,893 | INFO     | sum of deviations: 192675477058.00003
[2025-12-03 04:55:00] 2025-12-03 03:53:59,893 | INFO     | mean x: 1764712760.0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,893 | INFO     | mean y: 2035281.0681481482
[2025-12-03 04:55:00] 2025-12-03 03:53:59,893 | INFO     | intersect: -3563392791.5384655
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | chi2: 0.07168649823850222
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | current memory leak: 2.02 B/s (using 675 data points, chi2=0.07)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | could have reported an average CPU frequency of 4555 MHz (27 samples)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | ..............................
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . Timing measurements:
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . get job = 0 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . initial setup = 1 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . payload setup = 7 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . stage-in = 0 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . payload execution = 43043 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . stage-out = 1 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | . log creation = 0 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,894 | INFO     | ..............................
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | 
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | job summary report
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | --------------------------------------------------
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | PanDA job id: 6900369853
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | task id: 47556173
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | errors: (none)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | pilot state: finished 
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | transexitcode: 0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | exeerrorcode: 0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | exeerrordiag: 
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | exitcode: 0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | exitmsg: OK
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | cpuconsumptiontime: 85250 s
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | nevents: 1000
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | neventsw: 0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | pid: 449191
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | pgrp: 449191
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | corecount: 2
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | event service: False
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | sizes: {0: 2284149, 1: 2284348, 7: 2284610, 11: 2284638, 43054: 2330358, 43055: 2339358, 43057: 2339542, 43067: 2339788}
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | --------------------------------------------------
[2025-12-03 04:55:00] 2025-12-03 03:53:59,922 | INFO     | 
[2025-12-03 04:55:00] 2025-12-03 03:53:59,923 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,934 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | job 6900369853 has completed (purged errors)
[2025-12-03 04:55:00] 2025-12-03 03:53:59,935 | INFO     | overall cleanup function is called
[2025-12-03 04:55:00] 2025-12-03 03:54:00,942 | INFO     | --- collectZombieJob: --- 10, [449191]
[2025-12-03 04:55:00] 2025-12-03 03:54:00,942 | INFO     | zombie collector waiting for pid 449191
[2025-12-03 04:55:00] 2025-12-03 03:54:00,942 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 04:55:00] 2025-12-03 03:54:00,943 | INFO     | collected zombie processes
[2025-12-03 04:55:00] 2025-12-03 03:54:00,943 | INFO     | will attempt to kill all subprocesses of pid=449191
[2025-12-03 04:55:00] 2025-12-03 03:54:00,976 | INFO     | process IDs to be killed: [449191] (in reverse order)
[2025-12-03 04:55:00] 2025-12-03 03:54:00,996 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 04:55:00] 2025-12-03 03:54:00,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 04:55:00] 2025-12-03 03:54:00,999 | INFO     | did not find any defunct processes belonging to 449191
[2025-12-03 04:55:00] 2025-12-03 03:54:01,002 | INFO     | did not find any defunct processes belonging to 449191
[2025-12-03 04:55:00] 2025-12-03 03:54:01,004 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 04:55:00] 2025-12-03 03:54:01,005 | INFO     | ready for new job
[2025-12-03 04:55:00] 2025-12-03 03:54:01,005 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 04:55:00] 2025-12-03 03:54:01,008 | INFO     | ***************************************
[2025-12-03 04:55:00] 2025-12-03 03:54:01,009 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 04:55:00] 2025-12-03 03:54:01,009 | INFO     | ***************************************
[2025-12-03 04:55:00] 2025-12-03 03:54:01,009 | INFO     | 
[2025-12-03 04:55:00] 2025-12-03 03:54:01,010 | INFO     | architecture information:
[2025-12-03 04:55:00] 2025-12-03 03:54:01,011 | INFO     | executing command: cat /etc/os-release
[2025-12-03 04:55:00] 2025-12-03 03:54:01,031 | INFO     | cat /etc/os-release:
[2025-12-03 04:55:00] NAME="CentOS Linux"
[2025-12-03 04:55:00] VERSION="7 (Core)"
[2025-12-03 04:55:00] ID="centos"
[2025-12-03 04:55:00] ID_LIKE="rhel fedora"
[2025-12-03 04:55:00] VERSION_ID="7"
[2025-12-03 04:55:00] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 04:55:00] ANSI_COLOR="0;31"
[2025-12-03 04:55:00] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 04:55:00] HOME_URL="https://www.centos.org/"
[2025-12-03 04:55:00] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 04:55:00] 
[2025-12-03 04:55:00] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 04:55:00] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 04:55:00] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 04:55:00] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 04:55:00] 
[2025-12-03 04:55:00] 2025-12-03 03:54:01,032 | INFO     | ***************************************
[2025-12-03 04:55:00] 2025-12-03 03:54:01,535 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | INFO     | sufficient remaining disk space (488668921856 B)
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | INFO     | update_server=False
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 04:55:00] 2025-12-03 03:54:01,547 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 04:55:00] 2025-12-03 03:54:01,548 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 04:55:00] 2025-12-03 03:54:01,548 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:55:00] 2025-12-03 03:54:01,603 | INFO     | all job control threads have been joined
[2025-12-03 04:55:00] 2025-12-03 03:54:01,736 | INFO     | all data control threads have been joined
[2025-12-03 04:55:00] 2025-12-03 03:54:01,838 | INFO     | all payload control threads have been joined
[2025-12-03 04:55:00] 2025-12-03 03:54:02,021 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 04:55:00] 2025-12-03 03:54:02,021 | INFO     | aborting loop
[2025-12-03 04:55:00] 2025-12-03 03:54:02,553 | INFO     | [job] retrieve thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,554 | INFO     | [job] queue monitor thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,609 | INFO     | [job] control thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,742 | INFO     | [data] control thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,751 | INFO     | [data] copytool_in thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,844 | INFO     | [payload] control thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,935 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:02,959 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,027 | INFO     | [job] job monitor thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,119 | INFO     | [job] validate thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,214 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,252 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,554 | INFO     | [data] copytool_out thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,784 | INFO     | [payload] failed_post thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:03,965 | INFO     | [payload] validate_post thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:05,554 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 04:55:00] 2025-12-03 03:54:31,157 | INFO     | PID=442771 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-03 04:55:00] 2025-12-03 03:54:31,157 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 04:55:00] 2025-12-03 03:54:31,157 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 04:55:00] 2025-12-03 03:54:31,157 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 04:55:00] 2025-12-03 03:54:54,871 | INFO     | [monitor] cgroup control has ended
[2025-12-03 04:55:00] 2025-12-03 03:54:55,554 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140352723244864)>', '<ExcThread(monitor, started 140352367335168)>']
[2025-12-03 04:55:00] 2025-12-03 03:54:56,290 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 04:55:00] 2025-12-03 03:54:56,291 | INFO     | [monitor] control thread has ended
[2025-12-03 04:55:00] 2025-12-03 03:55:00,580 | INFO     | all workflow threads have been joined
[2025-12-03 04:55:00] 2025-12-03 03:55:00,580 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 04:55:00] 2025-12-03 03:55:00,580 | INFO     | traces error code: 0
[2025-12-03 04:55:00] 2025-12-03 03:55:00,581 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 04:55:00] 2025-12-03 03:55:00,622 [wrapper] ==== pilot stdout END ====
[2025-12-03 04:55:00] 2025-12-03 03:55:00,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 04:55:00] 2025-12-03 03:55:00,627 [wrapper] pilotpid: 442771
[2025-12-03 04:55:00] 2025-12-03 03:55:00,630 [wrapper] Pilot exit status: 0
[2025-12-03 04:55:00] 2025-12-03 03:55:00,634 [wrapper] pandaids: 6900369853
[2025-12-03 04:55:00] 2025-12-03 03:55:00,646 [wrapper] cleanup supervisor_pilot  517474 442772
[2025-12-03 04:55:00] 2025-12-03 03:55:00,648 [wrapper] Test setup, not cleaning
[2025-12-03 04:55:00] 2025-12-03 03:55:00,650 [wrapper] apfmon messages muted
[2025-12-03 04:55:00] 2025-12-03 03:55:00,652 [wrapper] ==== wrapper stdout END ====
[2025-12-03 04:55:00] 2025-12-03 03:55:00,655 [wrapper] ==== wrapper stderr END ====
[2025-12-03 04:55:00]  *** Error codes and diagnostics ***
[2025-12-03 04:55:00]     "exeErrorCode": 0,
[2025-12-03 04:55:00]     "exeErrorDiag": "",
[2025-12-03 04:55:00]     "pilotErrorCode": 0,
[2025-12-03 04:55:00]     "pilotErrorDiag": "",
[2025-12-03 04:55:00]  *** Listing of results directory ***
[2025-12-03 04:55:00] total 1302248
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc    576529 Nov 28 01:58 pilot3.tar.gz
[2025-12-03 04:55:00] -rwx------ 1 boinc boinc     36292 Nov 28 01:59 runpilot2-wrapper.sh
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc      5112 Nov 28 01:59 queuedata.json
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc       100 Dec  2 16:55 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 04:55:00] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 16:55 run_atlas
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc       105 Dec  2 16:55 job.xml
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc 410121349 Dec  2 16:55 EVNT.47483658._003462.pool.root.1
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc    590103 Dec  2 16:55 input.tar.gz
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc     15847 Dec  2 16:55 start_atlas.sh
[2025-12-03 04:55:00] drwxrwx--x 2 boinc boinc      4096 Dec  2 16:55 shared
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc         0 Dec  2 16:55 boinc_setup_complete
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc      6208 Dec  2 16:55 init_data.xml
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc         0 Dec  2 16:55 boinc_lockfile
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc      2788 Dec  2 16:55 pandaJob.out
[2025-12-03 04:55:00] -rw------- 1 boinc boinc    989202 Dec  2 16:55 agis_schedconf.cvmfs.json
[2025-12-03 04:55:00] drwx------ 5 boinc boinc      4096 Dec  2 16:55 pilot3
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc       531 Dec  3 04:50 boinc_task_state.xml
[2025-12-03 04:55:00] -rw------- 1 boinc boinc 904984116 Dec  3 04:53 HITS.47556173._004182.pool.root.1
[2025-12-03 04:55:00] -rw------- 1 boinc boinc      1021 Dec  3 04:53 memory_monitor_summary.json
[2025-12-03 04:55:00] -rw------- 1 boinc boinc   1516240 Dec  3 04:53 agis_ddmendpoints.agis.ALL.json
[2025-12-03 04:55:00] -rw------- 1 boinc boinc   1201370 Dec  3 04:53 log.47556173._004182.job.log.tgz.1
[2025-12-03 04:55:00] -rw------- 1 boinc boinc      8572 Dec  3 04:53 heartbeat.json
[2025-12-03 04:55:00] -rw------- 1 boinc boinc        95 Dec  3 04:54 pilot_heartbeat.json
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc      8192 Dec  3 04:54 boinc_mmap_file
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc        28 Dec  3 04:54 wrapper_checkpoint.txt
[2025-12-03 04:55:00] -rw------- 1 boinc boinc      4751 Dec  3 04:55 pilotlog.txt
[2025-12-03 04:55:00] -rw------- 1 boinc boinc   6036954 Dec  3 04:55 log.47556173._004182.job.log.1
[2025-12-03 04:55:00] -rw------- 1 boinc boinc       353 Dec  3 04:55 output.list
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc       620 Dec  3 04:55 runtime_log
[2025-12-03 04:55:00] -rw------- 1 boinc boinc   7260160 Dec  3 04:55 result.tar.gz
[2025-12-03 04:55:00] -rw------- 1 boinc boinc       669 Dec  3 04:55 t5RMDmQ01i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmw7NKDmbUY2un.diag
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc      8918 Dec  3 04:55 runtime_log.err
[2025-12-03 04:55:00] -rw-r--r-- 1 boinc boinc     21281 Dec  3 04:55 stderr.txt
[2025-12-03 04:55:00] HITS file was successfully produced:
[2025-12-03 04:55:00] -rw------- 1 boinc boinc 904984116 Dec  3 04:53 shared/HITS.pool.root.1
[2025-12-03 04:55:00]  *** Contents of shared directory: ***
[2025-12-03 04:55:00] total 1291984
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc 410121349 Dec  2 16:55 ATLAS.root_0
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc    590103 Dec  2 16:55 input.tar.gz
[2025-12-03 04:55:00] -rw-r--r-- 2 boinc boinc     15847 Dec  2 16:55 start_atlas.sh
[2025-12-03 04:55:00] -rw------- 1 boinc boinc 904984116 Dec  3 04:53 HITS.pool.root.1
[2025-12-03 04:55:00] -rw------- 1 boinc boinc   7260160 Dec  3 04:55 result.tar.gz
04:55:02 (439061): run_atlas exited; CPU time 85382.744041
04:55:02 (439061): called boinc_finish(0)

</stderr_txt>
]]>

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