Stderr output

<core_client_version>8.1.0</core_client_version>
<![CDATA[
<stderr_txt>
15:32:38 (739097): wrapper (7.7.26015): starting
15:32:38 (739097): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 15:32:38] Arguments: --nthreads 8
[2025-11-29 15:32:38] Threads: 8
[2025-11-29 15:32:38] Checking for CVMFS
[2025-11-29 15:32:39] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 15:32:39] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 15:32:39] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 15:32:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 15:32:39] 2.13.2.0 5678 37706 179716 153455 1 422 34075062 39288833 6718 16776704 0 30498166 99.773 20691562 38150 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 15:32:39] CVMFS is ok
[2025-11-29 15:32:39] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 15:32:39] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 15:32:39] Further information can be found at the LHC@home message board.
[2025-11-29 15:32:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 15:32:39] Checking for apptainer binary...
[2025-11-29 15:32:39] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 15:32:39] Running /usr/bin/apptainer --version
[2025-11-29 15:32:39] apptainer version 1.4.4-1.el9
[2025-11-29 15:32:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 15:32:39] c-210-21.aglt2.org
[2025-11-29 15:32:39] apptainer works
[2025-11-29 15:32:39] Set ATHENA_PROC_NUMBER=8
[2025-11-29 15:32:39] Set ATHENA_CORE_NUMBER=8
[2025-11-29 15:32:39] Starting ATLAS job with PandaID=6900797822
[2025-11-29 15:32:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 10:19:58]  *** The last 200 lines of the pilot log: ***
[2025-11-30 10:19:58] 2025-11-30 15:19:08,746 | INFO     | fitting pss+swap vs Time
[2025-11-30 10:19:58] 2025-11-30 15:19:08,748 | INFO     | sum of square deviations: 421027422247.8697
[2025-11-30 10:19:58] 2025-11-30 15:19:08,812 | INFO     | sum of deviations: 2198630091535.1602
[2025-11-30 10:19:58] 2025-11-30 15:19:08,812 | INFO     | mean x: 1764482144.6775067
[2025-11-30 10:19:58] 2025-11-30 15:19:08,812 | INFO     | mean y: 2952828.653116531
[2025-11-30 10:19:58] 2025-11-30 15:19:08,812 | INFO     | intersect: -9211277252.969772
[2025-11-30 10:19:58] 2025-11-30 15:19:08,814 | INFO     | chi2: 7.243495161261188
[2025-11-30 10:19:58] 2025-11-30 15:19:08,820 | INFO     | sum of square deviations: 415354839225.4771
[2025-11-30 10:19:58] 2025-11-30 15:19:08,920 | INFO     | sum of deviations: 2573647506011.4106
[2025-11-30 10:19:58] 2025-11-30 15:19:08,920 | INFO     | mean x: 1764481992.1987295
[2025-11-30 10:19:58] 2025-11-30 15:19:08,921 | INFO     | mean y: 2962909.5825771326
[2025-11-30 10:19:58] 2025-11-30 15:19:08,921 | INFO     | intersect: -10930230229.78788
[2025-11-30 10:19:58] 2025-11-30 15:19:08,922 | INFO     | chi2: 4.211117005832377
[2025-11-30 10:19:58] 2025-11-30 15:19:08,922 | INFO     | current chi2=4.211117005832377 (change=41.863466295197114 %)
[2025-11-30 10:19:58] 2025-11-30 15:19:08,928 | INFO     | sum of square deviations: 409730156638.82056
[2025-11-30 10:19:58] 2025-11-30 15:19:08,971 | INFO     | sum of deviations: 2829296256982.4966
[2025-11-30 10:19:58] 2025-11-30 15:19:08,971 | INFO     | mean x: 1764481839.674567
[2025-11-30 10:19:58] 2025-11-30 15:19:08,971 | INFO     | mean y: 2969834.2114858706
[2025-11-30 10:19:58] 2025-11-30 15:19:08,972 | INFO     | intersect: -12181248934.20475
[2025-11-30 10:19:58] 2025-11-30 15:19:08,973 | INFO     | chi2: 2.364273583450666
[2025-11-30 10:19:58] 2025-11-30 15:19:08,973 | INFO     | current chi2=2.364273583450666 (change=43.85637871908669 %)
[2025-11-30 10:19:58] 2025-11-30 15:19:08,974 | INFO     | sum of square deviations: 404153555632.8133
[2025-11-30 10:19:58] 2025-11-30 15:19:09,004 | INFO     | sum of deviations: 2845052121891.571
[2025-11-30 10:19:58] 2025-11-30 15:19:09,004 | INFO     | mean x: 1764481687.1098902
[2025-11-30 10:19:58] 2025-11-30 15:19:09,004 | INFO     | mean y: 2970263.261904762
[2025-11-30 10:19:58] 2025-11-30 15:19:09,004 | INFO     | intersect: -12418156058.614832
[2025-11-30 10:19:58] 2025-11-30 15:19:09,005 | INFO     | chi2: 2.2940751867591245
[2025-11-30 10:19:58] 2025-11-30 15:19:09,006 | INFO     | current chi2=2.2940751867591245 (change=2.9691317105986763 %)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,006 | INFO     | right removable region: 1091
[2025-11-30 10:19:58] 2025-11-30 15:19:09,007 | INFO     | sum of square deviations: 415348032849.3699
[2025-11-30 10:19:58] 2025-11-30 15:19:09,039 | INFO     | sum of deviations: 1894533782083.4758
[2025-11-30 10:19:58] 2025-11-30 15:19:09,039 | INFO     | mean x: 1764482297.2477314
[2025-11-30 10:19:58] 2025-11-30 15:19:09,039 | INFO     | mean y: 2960988.99092559
[2025-11-30 10:19:58] 2025-11-30 15:19:09,039 | INFO     | intersect: -8045401000.570753
[2025-11-30 10:19:58] 2025-11-30 15:19:09,041 | INFO     | chi2: 5.167532935045749
[2025-11-30 10:19:58] 2025-11-30 15:19:09,041 | INFO     | current chi2=5.167532935045749 (change=28.659675750428566 %)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,043 | INFO     | sum of square deviations: 409720370849.3169
[2025-11-30 10:19:58] 2025-11-30 15:19:09,076 | INFO     | sum of deviations: 1807571583658.0613
[2025-11-30 10:19:58] 2025-11-30 15:19:09,076 | INFO     | mean x: 1764482449.812215
[2025-11-30 10:19:58] 2025-11-30 15:19:09,076 | INFO     | mean y: 2963346.010027347
[2025-11-30 10:19:58] 2025-11-30 15:19:09,077 | INFO     | intersect: -7781439293.117963
[2025-11-30 10:19:58] 2025-11-30 15:19:09,078 | INFO     | chi2: 5.092591130125268
[2025-11-30 10:19:58] 2025-11-30 15:19:09,078 | INFO     | current chi2=5.092591130125268 (change=1.4502433920107554 %)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,078 | INFO     | left removable region: 20
[2025-11-30 10:19:58] 2025-11-30 15:19:09,080 | INFO     | sum of square deviations: 381281301156.3494
[2025-11-30 10:19:58] 2025-11-30 15:19:09,113 | INFO     | sum of deviations: 2332061122024.001
[2025-11-30 10:19:58] 2025-11-30 15:19:09,113 | INFO     | mean x: 1764482266.8253968
[2025-11-30 10:19:58] 2025-11-30 15:19:09,113 | INFO     | mean y: 2984243.3529411764
[2025-11-30 10:19:58] 2025-11-30 15:19:09,114 | INFO     | intersect: -10789258865.566072
[2025-11-30 10:19:58] 2025-11-30 15:19:09,115 | INFO     | chi2: 0.09041210120366018
[2025-11-30 10:19:58] 2025-11-30 15:19:09,115 | INFO     | current memory leak: 6.12 B/s (using 1071 data points, chi2=0.09)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | could have reported an average CPU frequency of 2587 MHz (40 samples)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | ..............................
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . Timing measurements:
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . get job = 0 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . initial setup = 4 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . payload setup = 4 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . stage-in = 0 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,117 | INFO     | . payload execution = 67531 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,118 | INFO     | . stage-out = 5 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,118 | INFO     | . log creation = 1 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,118 | INFO     | ..............................
[2025-11-30 10:19:58] 2025-11-30 15:19:09,388 | INFO     | 
[2025-11-30 10:19:58] 2025-11-30 15:19:09,388 | INFO     | job summary report
[2025-11-30 10:19:58] 2025-11-30 15:19:09,388 | INFO     | --------------------------------------------------
[2025-11-30 10:19:58] 2025-11-30 15:19:09,388 | INFO     | PanDA job id: 6900797822
[2025-11-30 10:19:58] 2025-11-30 15:19:09,388 | INFO     | task id: 47556173
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | errors: (none)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | pilot state: finished 
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | transexitcode: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | exeerrorcode: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | exeerrordiag: 
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | exitcode: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | exitmsg: OK
[2025-11-30 10:19:58] 2025-11-30 15:19:09,389 | INFO     | cpuconsumptiontime: 312566 s
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | nevents: 1000
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | neventsw: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | pid: 749192
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | pgrp: 749192
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | corecount: 8
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | event service: False
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | sizes: {0: 2284317, 4: 2284579, 11: 2284607, 67540: 2340972, 67546: 2349966, 67547: 2350022, 67563: 2350396}
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | --------------------------------------------------
[2025-11-30 10:19:58] 2025-11-30 15:19:09,390 | INFO     | 
[2025-11-30 10:19:58] 2025-11-30 15:19:09,391 | INFO     | executing command: ls -lF /tmp/boinchome/slots/2
[2025-11-30 10:19:58] 2025-11-30 15:19:09,412 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,412 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,412 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,412 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,413 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,414 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 10:19:58] 2025-11-30 15:19:09,415 | INFO     | job 6900797822 has completed (purged errors)
[2025-11-30 10:19:58] 2025-11-30 15:19:09,415 | INFO     | overall cleanup function is called
[2025-11-30 10:19:58] 2025-11-30 15:19:10,459 | INFO     | --- collectZombieJob: --- 10, [749192]
[2025-11-30 10:19:58] 2025-11-30 15:19:10,459 | INFO     | zombie collector waiting for pid 749192
[2025-11-30 10:19:58] 2025-11-30 15:19:10,459 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 10:19:58] 2025-11-30 15:19:10,459 | INFO     | collected zombie processes
[2025-11-30 10:19:58] 2025-11-30 15:19:10,459 | INFO     | will attempt to kill all subprocesses of pid=749192
[2025-11-30 10:19:58] 2025-11-30 15:19:10,972 | INFO     | process IDs to be killed: [749192] (in reverse order)
[2025-11-30 10:19:58] 2025-11-30 15:19:11,097 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 10:19:58] 2025-11-30 15:19:11,098 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 10:19:58] 2025-11-30 15:19:11,116 | INFO     | did not find any defunct processes belonging to 749192
[2025-11-30 10:19:58] 2025-11-30 15:19:11,138 | INFO     | did not find any defunct processes belonging to 749192
[2025-11-30 10:19:58] 2025-11-30 15:19:11,143 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 10:19:58] 2025-11-30 15:19:11,143 | INFO     | ready for new job
[2025-11-30 10:19:58] 2025-11-30 15:19:11,143 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 10:19:58] 2025-11-30 15:19:11,153 | INFO     | ***************************************
[2025-11-30 10:19:58] 2025-11-30 15:19:11,153 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 10:19:58] 2025-11-30 15:19:11,153 | INFO     | ***************************************
[2025-11-30 10:19:58] 2025-11-30 15:19:11,153 | INFO     | 
[2025-11-30 10:19:58] 2025-11-30 15:19:11,159 | INFO     | architecture information:
[2025-11-30 10:19:58] 2025-11-30 15:19:11,160 | INFO     | executing command: cat /etc/os-release
[2025-11-30 10:19:58] 2025-11-30 15:19:11,221 | INFO     | cat /etc/os-release:
[2025-11-30 10:19:58] NAME="CentOS Linux"
[2025-11-30 10:19:58] VERSION="7 (Core)"
[2025-11-30 10:19:58] ID="centos"
[2025-11-30 10:19:58] ID_LIKE="rhel fedora"
[2025-11-30 10:19:58] VERSION_ID="7"
[2025-11-30 10:19:58] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 10:19:58] ANSI_COLOR="0;31"
[2025-11-30 10:19:58] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 10:19:58] HOME_URL="https://www.centos.org/"
[2025-11-30 10:19:58] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 10:19:58] 
[2025-11-30 10:19:58] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 10:19:58] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 10:19:58] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 10:19:58] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 10:19:58] 
[2025-11-30 10:19:58] 2025-11-30 15:19:11,221 | INFO     | ***************************************
[2025-11-30 10:19:58] 2025-11-30 15:19:11,725 | INFO     | executing command: df -mP /tmp/boinchome/slots/2
[2025-11-30 10:19:58] 2025-11-30 15:19:11,772 | INFO     | sufficient remaining disk space (47646244864 B)
[2025-11-30 10:19:58] 2025-11-30 15:19:11,773 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 10:19:58] 2025-11-30 15:19:11,773 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 10:19:58] 2025-11-30 15:19:11,773 | INFO     | update_server=False
[2025-11-30 10:19:58] 2025-11-30 15:19:11,773 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 10:19:58] 2025-11-30 15:19:12,144 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-30 10:19:58] 2025-11-30 15:19:12,144 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-30 10:19:58] 2025-11-30 15:19:12,144 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 10:19:58] 2025-11-30 15:19:12,144 | INFO     | will abort loop
[2025-11-30 10:19:58] 2025-11-30 15:19:12,383 | INFO     | all data control threads have been joined
[2025-11-30 10:19:58] 2025-11-30 15:19:12,397 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 10:19:58] 2025-11-30 15:19:12,439 | INFO     | all payload control threads have been joined
[2025-11-30 10:19:58] 2025-11-30 15:19:12,487 | INFO     | all job control threads have been joined
[2025-11-30 10:19:58] 2025-11-30 15:19:12,620 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 10:19:58] 2025-11-30 15:19:12,779 | INFO     | [job] retrieve thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:12,827 | INFO     | [payload] validate_post thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:12,851 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:12,861 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:12,906 | INFO     | [job] validate thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:12,977 | INFO     | [data] copytool_in thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,149 | INFO     | [job] job monitor thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,389 | INFO     | [data] control thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,419 | INFO     | [payload] failed_post thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,445 | INFO     | [payload] control thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,493 | INFO     | [job] control thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:13,961 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:14,040 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:14,241 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 10:19:58] 2025-11-30 15:19:14,629 | INFO     | [data] copytool_out thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:15,253 | INFO     | [job] queue monitor thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:16,408 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 10:19:58] 2025-11-30 15:19:41,797 | INFO     | PID=742777 has CPU usage=3.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 10:19:58] 2025-11-30 15:19:41,798 | INFO     | .. there are 10 such processes running
[2025-11-30 10:19:58] 2025-11-30 15:19:41,798 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 10:19:58] 2025-11-30 15:19:41,798 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 10:19:58] 2025-11-30 15:19:41,798 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 10:19:58] 2025-11-30 15:19:51,186 | INFO     | [monitor] cgroup control has ended
[2025-11-30 10:19:58] 2025-11-30 15:19:52,426 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139667917039424)>', '<ExcThread(monitor, started 139667278120704)>']
[2025-11-30 10:19:58] 2025-11-30 15:19:52,863 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 10:19:58] 2025-11-30 15:19:52,863 | INFO     | [monitor] control thread has ended
[2025-11-30 10:19:58] 2025-11-30 15:19:57,452 | INFO     | all workflow threads have been joined
[2025-11-30 10:19:58] 2025-11-30 15:19:57,452 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 10:19:58] 2025-11-30 15:19:57,452 | INFO     | traces error code: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:57,452 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 10:19:58] 2025-11-30 15:19:57,817 [wrapper] ==== pilot stdout END ====
[2025-11-30 10:19:58] 2025-11-30 15:19:57,890 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 10:19:58] 2025-11-30 15:19:57,951 [wrapper] pilotpid: 742777
[2025-11-30 10:19:58] 2025-11-30 15:19:58,060 [wrapper] Pilot exit status: 0
[2025-11-30 10:19:58] 2025-11-30 15:19:58,148 [wrapper] pandaids: 6900797822
[2025-11-30 10:19:58] 2025-11-30 15:19:58,203 [wrapper] cleanup supervisor_pilot 2400233 742778
[2025-11-30 10:19:58] 2025-11-30 15:19:58,208 [wrapper] Test setup, not cleaning
[2025-11-30 10:19:58] 2025-11-30 15:19:58,212 [wrapper] apfmon messages muted
[2025-11-30 10:19:58] 2025-11-30 15:19:58,215 [wrapper] ==== wrapper stdout END ====
[2025-11-30 10:19:58] 2025-11-30 15:19:58,219 [wrapper] ==== wrapper stderr END ====
[2025-11-30 10:19:58]  *** Error codes and diagnostics ***
[2025-11-30 10:19:58]     "exeErrorCode": 0,
[2025-11-30 10:19:58]     "exeErrorDiag": "",
[2025-11-30 10:19:58]     "pilotErrorCode": 0,
[2025-11-30 10:19:58]     "pilotErrorDiag": "",
[2025-11-30 10:19:58]  *** Listing of results directory ***
[2025-11-30 10:19:58] total 1329908
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas    576529 Nov 27 19:58 pilot3.tar.gz
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas      5112 Nov 27 19:59 queuedata.json
[2025-11-30 10:19:58] -rwx------. 1 boincer umatlas     36292 Nov 27 19:59 runpilot2-wrapper.sh
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas       100 Nov 29 15:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 10:19:58] -rwxr-xr-x. 1 boincer umatlas      7986 Nov 29 15:32 run_atlas
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas       105 Nov 29 15:32 job.xml
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas 410976718 Nov 29 15:32 EVNT.47483658._003502.pool.root.1
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 15:32 start_atlas.sh
[2025-11-30 10:19:58] drwxrwx--x. 2 boincer umatlas      4096 Nov 29 15:32 shared
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas    590098 Nov 29 15:32 input.tar.gz
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas         0 Nov 29 15:32 boinc_lockfile
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas      2788 Nov 29 15:32 pandaJob.out
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas        57 Nov 29 15:32 setup.sh.local
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas    991826 Nov 29 15:32 agis_schedconf.cvmfs.json
[2025-11-30 10:19:58] drwx------. 5 boincer umatlas      4096 Nov 29 15:32 pilot3
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas       533 Nov 30 10:04 boinc_task_state.xml
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas 924635393 Nov 30 10:17 HITS.47556173._004584.pool.root.1
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas      6663 Nov 30 10:18 init_data.xml
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas      1055 Nov 30 10:18 memory_monitor_summary.json
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas   1516240 Nov 30 10:18 agis_ddmendpoints.agis.ALL.json
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas   2237178 Nov 30 10:18 log.47556173._004584.job.log.tgz.1
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas        95 Nov 30 10:18 pilot_heartbeat.json
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas      8614 Nov 30 10:19 heartbeat.json
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas      8192 Nov 30 10:19 boinc_mmap_file
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas        29 Nov 30 10:19 wrapper_checkpoint.txt
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas      5009 Nov 30 10:19 pilotlog.txt
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas   8909789 Nov 30 10:19 log.47556173._004584.job.log.1
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas       353 Nov 30 10:19 output.list
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas       620 Nov 30 10:19 runtime_log
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas  11161600 Nov 30 10:19 result.tar.gz
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas      9343 Nov 30 10:19 runtime_log.err
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas       661 Nov 30 10:19 HvOODma01i8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmZvKKDm5ZEeSn.diag
[2025-11-30 10:19:58] -rw-r--r--. 1 boincer umatlas     21127 Nov 30 10:19 stderr.txt
[2025-11-30 10:19:58] HITS file was successfully produced:
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas 924635393 Nov 30 10:17 shared/HITS.pool.root.1
[2025-11-30 10:19:58]  *** Contents of shared directory: ***
[2025-11-30 10:19:58] total 1315816
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas 410976718 Nov 29 15:32 ATLAS.root_0
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas     15847 Nov 29 15:32 start_atlas.sh
[2025-11-30 10:19:58] -rw-r--r--. 2 boincer umatlas    590098 Nov 29 15:32 input.tar.gz
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas 924635393 Nov 30 10:17 HITS.pool.root.1
[2025-11-30 10:19:58] -rw-------. 1 boincer umatlas  11161600 Nov 30 10:19 result.tar.gz
10:20:00 (739097): run_atlas exited; CPU time 313622.942605
10:20:00 (739097): called boinc_finish(0)

</stderr_txt>
]]>

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