Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
00:12:11 (26803): wrapper (7.7.26015): starting
00:12:11 (26803): wrapper: running run_atlas (--nthreads 8)
[2025-11-30 00:12:11] Arguments: --nthreads 8
[2025-11-30 00:12:11] Threads: 8
[2025-11-30 00:12:11] Checking for CVMFS
[2025-11-30 00:12:11] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 00:12:11] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 00:12:11] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 00:12:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 00:12:11] 2.11.0.0 3942 70904 88620 153460 3 90 2518594 4096000 4195 130560 3 5889926 99.326 7418695 684 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://141.99.253.245:3128 1
[2025-11-30 00:12:11] CVMFS is ok
[2025-11-30 00:12:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 00:12:11] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 00:12:11] Further information can be found at the LHC@home message board.
[2025-11-30 00:12:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 00:12:11] Checking for apptainer binary...
[2025-11-30 00:12:11] /usr/bin/which: no apptainer in (/opt/ohpc/pub/libs/singularity/3.7.1/bin:/cm/shared/apps/slurm/current/sbin:/cm/shared/apps/slurm/current/bin:/home/mf493845/.local/bin:/home/mf493845/bin:/usr/local/bin:/usr/bin:/usr/local/sbin:/usr/sbin)
[2025-11-30 00:12:11] apptainer is not installed, using version from CVMFS
[2025-11-30 00:12:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 00:12:11] WARNING: Environment variable TMPDIR already has value [/tmp/job_10934962/atlas/pilot/slots/0/.apptainertmp], will not forward new value [/tmp] from parent process environment hpc-node259
[2025-11-30 00:12:11] apptainer works
[2025-11-30 00:12:12] Set ATHENA_PROC_NUMBER=8
[2025-11-30 00:12:12] Set ATHENA_CORE_NUMBER=8
[2025-11-30 00:12:12] Starting ATLAS job with PandaID=6900298844
[2025-11-30 00:12:12] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/tmp/job_10934962/atlas/pilot/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 04:30:01]  *** The last 200 lines of the pilot log: ***
[2025-11-30 04:30:01] 2025-11-30 03:29:26,314 | INFO     | number of running child processes to parent process 7962: 1
[2025-11-30 04:30:01] 2025-11-30 03:29:26,314 | INFO     | maximum number of monitored processes: 16
[2025-11-30 04:30:01] 2025-11-30 03:29:28,022 | INFO     | time since job start (15432s) is within the limit (172800.0s)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,123 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 04:30:01] 2025-11-30 03:29:28,127 | INFO     | found 64 cores (32 cores per socket, 2 sockets) , CPU MHz: 2549.6683749999997
[2025-11-30 04:30:01] 2025-11-30 03:29:28,132 | INFO     | using path: /tmp/job_10934962/atlas/pilot/slots/0/PanDA_Pilot-6900298844/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,133 | INFO     | extracted standard info from prmon json
[2025-11-30 04:30:01] 2025-11-30 03:29:28,133 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 04:30:01] 2025-11-30 03:29:28,133 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 04:30:01] 2025-11-30 03:29:28,135 | INFO     | fitting pss+swap vs Time
[2025-11-30 04:30:01] 2025-11-30 03:29:28,135 | INFO     | sum of square deviations: 5021496942.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,136 | INFO     | sum of deviations: 114843115280.99997
[2025-11-30 04:30:01] 2025-11-30 03:29:28,136 | INFO     | mean x: 1764465640.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,136 | INFO     | mean y: 2897657.4466403164
[2025-11-30 04:30:01] 2025-11-30 03:29:28,136 | INFO     | intersect: -40350951651.71488
[2025-11-30 04:30:01] 2025-11-30 03:29:28,137 | INFO     | chi2: 2.664660156809093
[2025-11-30 04:30:01] 2025-11-30 03:29:28,137 | INFO     | sum of square deviations: 4729621702.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | sum of deviations: 149992394127.00003
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | mean x: 1764465487.5
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | mean y: 2915810.6532258065
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | intersect: -55954287428.80984
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | chi2: 1.4618039612476343
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | current chi2=1.4618039612476343 (change=45.14107333679159 %)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,138 | INFO     | sum of square deviations: 4449281562.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | sum of deviations: 144804566777.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | mean x: 1764465335.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | mean y: 2912987.880658436
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | intersect: -57422681429.40275
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | chi2: 1.459208340782973
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | current chi2=1.459208340782973 (change=0.17756282876987112 %)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,139 | INFO     | right removable region: 242
[2025-11-30 04:30:01] 2025-11-30 03:29:28,140 | INFO     | sum of square deviations: 4729621702.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,140 | INFO     | sum of deviations: 67189122708.00001
[2025-11-30 04:30:01] 2025-11-30 03:29:28,140 | INFO     | mean x: 1764465792.5
[2025-11-30 04:30:01] 2025-11-30 03:29:28,140 | INFO     | mean y: 2922359.919354839
[2025-11-30 04:30:01] 2025-11-30 03:29:28,140 | INFO     | intersect: -25063122266.063923
[2025-11-30 04:30:01] 2025-11-30 03:29:28,141 | INFO     | chi2: 1.2694088600034812
[2025-11-30 04:30:01] 2025-11-30 03:29:28,141 | INFO     | current chi2=1.2694088600034812 (change=52.361322446326994 %)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,141 | INFO     | sum of square deviations: 4449281562.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | sum of deviations: 55423079453.00001
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | mean x: 1764465945.0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | mean y: 2928756.962962963
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | intersect: -21976380688.64765
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | chi2: 1.2477397531557737
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | current chi2=1.2477397531557737 (change=1.707023444569946 %)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | left removable region: 20
[2025-11-30 04:30:01] 2025-11-30 03:29:28,142 | INFO     | sum of square deviations: 3392567795.5
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | sum of deviations: 67595331010.5
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | mean x: 1764465914.5
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | mean y: 2957162.761261261
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | intersect: -35153203225.713455
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | chi2: 0.013522339444235157
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | current memory leak: 19.92 B/s (using 222 data points, chi2=0.01)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,143 | INFO     | could have reported an average CPU frequency of 3018 MHz (12 samples)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | ..............................
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . Timing measurements:
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . get job = 0 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . initial setup = 1 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . payload setup = 2 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . stage-in = 0 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . payload execution = 15407 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . stage-out = 1 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | . log creation = 0 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,144 | INFO     | ..............................
[2025-11-30 04:30:01] 2025-11-30 03:29:28,385 | INFO     | 
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | job summary report
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | --------------------------------------------------
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | PanDA job id: 6900298844
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | task id: 47556173
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | errors: (none)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | pilot state: finished 
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | transexitcode: 0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | exeerrorcode: 0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | exeerrordiag: 
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | exitcode: 0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | exitmsg: OK
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | cpuconsumptiontime: 118188 s
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | nevents: 1000
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | neventsw: 0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | pid: 7962
[2025-11-30 04:30:01] 2025-11-30 03:29:28,386 | INFO     | pgrp: 7962
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | corecount: 8
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | event service: False
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | sizes: {0: 2284155, 1: 2284465, 3: 2284727, 11: 2284755, 15413: 2316832, 15415: 2325856, 15417: 2326040, 15419: 2326286}
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | --------------------------------------------------
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | 
[2025-11-30 04:30:01] 2025-11-30 03:29:28,387 | INFO     | executing command: ls -lF /tmp/job_10934962/atlas/pilot/slots/0
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,396 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | job 6900298844 has completed (purged errors)
[2025-11-30 04:30:01] 2025-11-30 03:29:28,397 | INFO     | overall cleanup function is called
[2025-11-30 04:30:01] 2025-11-30 03:29:29,404 | INFO     | --- collectZombieJob: --- 10, [7962]
[2025-11-30 04:30:01] 2025-11-30 03:29:29,405 | INFO     | zombie collector waiting for pid 7962
[2025-11-30 04:30:01] 2025-11-30 03:29:29,405 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 04:30:01] 2025-11-30 03:29:29,405 | INFO     | collected zombie processes
[2025-11-30 04:30:01] 2025-11-30 03:29:29,405 | INFO     | will attempt to kill all subprocesses of pid=7962
[2025-11-30 04:30:01] 2025-11-30 03:29:29,511 | INFO     | process IDs to be killed: [7962] (in reverse order)
[2025-11-30 04:30:01] 2025-11-30 03:29:29,551 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 04:30:01] 2025-11-30 03:29:29,552 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 04:30:01] 2025-11-30 03:29:29,555 | INFO     | did not find any defunct processes belonging to 7962
[2025-11-30 04:30:01] 2025-11-30 03:29:29,558 | INFO     | did not find any defunct processes belonging to 7962
[2025-11-30 04:30:01] 2025-11-30 03:29:29,559 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 04:30:01] 2025-11-30 03:29:29,559 | INFO     | ready for new job
[2025-11-30 04:30:01] 2025-11-30 03:29:29,559 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 04:30:01] 2025-11-30 03:29:29,560 | INFO     | ***************************************
[2025-11-30 04:30:01] 2025-11-30 03:29:29,560 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 04:30:01] 2025-11-30 03:29:29,560 | INFO     | ***************************************
[2025-11-30 04:30:01] 2025-11-30 03:29:29,560 | INFO     | 
[2025-11-30 04:30:01] 2025-11-30 03:29:29,573 | INFO     | architecture information:
[2025-11-30 04:30:01] 2025-11-30 03:29:29,573 | INFO     | executing command: cat /etc/os-release
[2025-11-30 04:30:01] 2025-11-30 03:29:29,581 | INFO     | cat /etc/os-release:
[2025-11-30 04:30:01] NAME="CentOS Linux"
[2025-11-30 04:30:01] VERSION="7 (Core)"
[2025-11-30 04:30:01] ID="centos"
[2025-11-30 04:30:01] ID_LIKE="rhel fedora"
[2025-11-30 04:30:01] VERSION_ID="7"
[2025-11-30 04:30:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 04:30:01] ANSI_COLOR="0;31"
[2025-11-30 04:30:01] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 04:30:01] HOME_URL="https://www.centos.org/"
[2025-11-30 04:30:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 04:30:01] 
[2025-11-30 04:30:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 04:30:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 04:30:01] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 04:30:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 04:30:01] 
[2025-11-30 04:30:01] 2025-11-30 03:29:29,581 | INFO     | ***************************************
[2025-11-30 04:30:01] 2025-11-30 03:29:30,083 | INFO     | executing command: df -mP /tmp/job_10934962/atlas/pilot/slots/0
[2025-11-30 04:30:01] 2025-11-30 03:29:30,091 | INFO     | sufficient remaining disk space (218588250112 B)
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | INFO     | update_server=False
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 04:30:01] 2025-11-30 03:29:30,092 | INFO     | aborting loop
[2025-11-30 04:30:01] 2025-11-30 03:29:30,247 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 04:30:01] 2025-11-30 03:29:30,764 | INFO     | all data control threads have been joined
[2025-11-30 04:30:01] 2025-11-30 03:29:31,097 | INFO     | [job] retrieve thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,097 | INFO     | [job] queue monitor thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,097 | INFO     | [job] job monitor thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,101 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,114 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,198 | INFO     | [job] validate thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,248 | INFO     | all job control threads have been joined
[2025-11-30 04:30:01] 2025-11-30 03:29:31,264 | INFO     | [data] copytool_in thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,300 | INFO     | [payload] validate_post thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,315 | INFO     | all payload control threads have been joined
[2025-11-30 04:30:01] 2025-11-30 03:29:31,392 | INFO     | [payload] failed_post thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,459 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:31,769 | INFO     | [data] control thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:32,090 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 04:30:01] 2025-11-30 03:29:32,253 | INFO     | [data] copytool_out thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:32,253 | INFO     | [job] control thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:32,259 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:32,320 | INFO     | [payload] control thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:36,092 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 04:30:01] 2025-11-30 03:29:42,089 | INFO     | [monitor] cgroup control has ended
[2025-11-30 04:30:01] 2025-11-30 03:29:44,088 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 23456247945024)>', '<ExcThread(monitor, started 23456058717952)>']
[2025-11-30 04:30:01] 2025-11-30 03:29:49,113 | INFO     | all workflow threads have been joined
[2025-11-30 04:30:01] 2025-11-30 03:29:49,114 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 04:30:01] 2025-11-30 03:29:49,114 | INFO     | traces error code: 0
[2025-11-30 04:30:01] 2025-11-30 03:29:49,114 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | INFO     | PID=31625 has CPU usage=3.7% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | INFO     | .. there are 5 such processes running
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 04:30:01] 2025-11-30 03:30:01,219 | INFO     | [monitor] control thread has ended
[2025-11-30 04:30:01] 2025-11-30 03:30:01,276 [wrapper] ==== pilot stdout END ====
[2025-11-30 04:30:01] 2025-11-30 03:30:01,278 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 04:30:01] 2025-11-30 03:30:01,279 [wrapper] pilotpid: 31625
[2025-11-30 04:30:01] 2025-11-30 03:30:01,281 [wrapper] Pilot exit status: 0
[2025-11-30 04:30:01] 2025-11-30 03:30:01,285 [wrapper] pandaids: 6900298844
[2025-11-30 04:30:01] 2025-11-30 03:30:01,310 [wrapper] cleanup supervisor_pilot 24332 31626
[2025-11-30 04:30:01] 2025-11-30 03:30:01,312 [wrapper] Test setup, not cleaning
[2025-11-30 04:30:01] 2025-11-30 03:30:01,313 [wrapper] apfmon messages muted
[2025-11-30 04:30:01] 2025-11-30 03:30:01,314 [wrapper] ==== wrapper stdout END ====
[2025-11-30 04:30:01] 2025-11-30 03:30:01,315 [wrapper] ==== wrapper stderr END ====
[2025-11-30 04:30:01]  *** Error codes and diagnostics ***
[2025-11-30 04:30:01]     "exeErrorCode": 0,
[2025-11-30 04:30:01]     "exeErrorDiag": "",
[2025-11-30 04:30:01]     "pilotErrorCode": 0,
[2025-11-30 04:30:01]     "pilotErrorDiag": "",
[2025-11-30 04:30:01]  *** Listing of results directory ***
[2025-11-30 04:30:01] total 1300252
[2025-11-30 04:30:01] -rwx------ 1 mf493845 unix-user     36292 Nov 28 01:58 runpilot2-wrapper.sh
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user    576529 Nov 28 01:58 pilot3.tar.gz
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      5112 Nov 28 01:59 queuedata.json
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       100 Nov 29 22:27 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 04:30:01] -rwxr-xr-x 1 mf493845 unix-user      7986 Nov 29 22:27 run_atlas
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       105 Nov 29 22:27 job.xml
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 00:12 start_atlas.sh
[2025-11-30 04:30:01] drwxrwx--x 2 mf493845 unix-user       100 Nov 30 00:12 shared
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user    590102 Nov 30 00:12 input.tar.gz
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user 409332667 Nov 30 00:12 EVNT.47483658._003448.pool.root.1
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user         0 Nov 30 00:12 boinc_setup_complete
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      6390 Nov 30 00:12 init_data.xml
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      8192 Nov 30 00:12 boinc_mmap_file
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user         0 Nov 30 00:12 boinc_lockfile
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      2785 Nov 30 00:12 pandaJob.out
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user    991826 Nov 30 00:12 agis_schedconf.cvmfs.json
[2025-11-30 04:30:01] drwx------ 5 mf493845 unix-user       440 Nov 30 00:12 pilot3
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user 910680646 Nov 30 04:28 HITS.47556173._004041.pool.root.1
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user        95 Nov 30 04:29 pilot_heartbeat.json
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      1025 Nov 30 04:29 memory_monitor_summary.json
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user   1516240 Nov 30 04:29 agis_ddmendpoints.agis.ALL.json
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user   1549005 Nov 30 04:29 log.47556173._004041.job.log.tgz.1
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      8572 Nov 30 04:29 heartbeat.json
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       820 Nov 30 04:30 pilotlog.txt
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user   2226045 Nov 30 04:30 log.47556173._004041.job.log.1
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       353 Nov 30 04:30 output.list
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       620 Nov 30 04:30 runtime_log
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user   3799040 Nov 30 04:30 result.tar.gz
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user      9221 Nov 30 04:30 runtime_log.err
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user       650 Nov 30 04:30 5M7MDmI01i8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDm36NKDmBgXINm.diag
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user     21679 Nov 30 04:30 stderr.txt
[2025-11-30 04:30:01] HITS file was successfully produced:
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user 910680646 Nov 30 04:28 shared/HITS.pool.root.1
[2025-11-30 04:30:01]  *** Contents of shared directory: ***
[2025-11-30 04:30:01] total 1293388
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user     15847 Nov 30 00:12 start_atlas.sh
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user    590102 Nov 30 00:12 input.tar.gz
[2025-11-30 04:30:01] -rw-r--r-- 2 mf493845 unix-user 409332667 Nov 30 00:12 ATLAS.root_0
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user 910680646 Nov 30 04:28 HITS.pool.root.1
[2025-11-30 04:30:01] -rw------- 1 mf493845 unix-user   3799040 Nov 30 04:30 result.tar.gz
04:30:02 (26803): run_atlas exited; CPU time 118366.911159
04:30:02 (26803): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN