Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
11:16:40 (490060): wrapper (7.7.26015): starting
11:16:40 (490060): wrapper: running run_atlas (--nthreads 12)
[2025-11-30 11:16:40] Arguments: --nthreads 12
[2025-11-30 11:16:40] Threads: 12
[2025-11-30 11:16:40] Checking for CVMFS
[2025-11-30 11:16:40] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-30 11:16:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-30 11:16:40] Running cvmfs_config stat atlas.cern.ch
[2025-11-30 11:16:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-30 11:16:40] 2.13.3.0 9777 12686 98064 153477 0 79 3532475 4097025 1044 130560 0 9586647 99.971 695328 15210 http://cvmfs-stratum-one.cern.ch/cvmfs/atlas.cern.ch http://188.184.28.244:3128 1
[2025-11-30 11:16:40] CVMFS is ok
[2025-11-30 11:16:40] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-30 11:16:40] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-30 11:16:40] Further information can be found at the LHC@home message board.
[2025-11-30 11:16:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-30 11:16:40] Checking for apptainer binary...
[2025-11-30 11:16:40] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2025-11-30 11:16:40] apptainer is not installed, using version from CVMFS
[2025-11-30 11:16:40] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-30 11:16:41] pckelar6.cern.ch
[2025-11-30 11:16:41] apptainer works
[2025-11-30 11:16:41] Set ATHENA_PROC_NUMBER=12
[2025-11-30 11:16:41] Set ATHENA_CORE_NUMBER=12
[2025-11-30 11:16:41] Starting ATLAS job with PandaID=6893871905
[2025-11-30 11:16:41] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 23:00:07]  *** The last 200 lines of the pilot log: ***
[2025-11-30 23:00:07] 2025-11-30 21:59:15,470 | INFO     | monitor loop #2979: job 0:6893871905 is in state 'finished'
[2025-11-30 23:00:07] 2025-11-30 21:59:15,470 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,088 | INFO     | time since job start (42145s) is within the limit (172800.0s)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,581 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-30 23:00:07] 2025-11-30 21:59:16,589 | INFO     | found 12 cores (6 cores per socket, 2 sockets) HT, CPU MHz: 2816.6100833333326
[2025-11-30 23:00:07] 2025-11-30 21:59:16,595 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-6893871905/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,596 | INFO     | extracted standard info from prmon json
[2025-11-30 23:00:07] 2025-11-30 21:59:16,596 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 23:00:07] 2025-11-30 21:59:16,597 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 23:00:07] 2025-11-30 21:59:16,616 | INFO     | fitting pss+swap vs Time
[2025-11-30 23:00:07] 2025-11-30 21:59:16,618 | INFO     | sum of square deviations: 102308068350.23451
[2025-11-30 23:00:07] 2025-11-30 21:59:16,634 | INFO     | sum of deviations: 1522065814354.4705
[2025-11-30 23:00:07] 2025-11-30 21:59:16,634 | INFO     | mean x: 1764518887.9667149
[2025-11-30 23:00:07] 2025-11-30 21:59:16,634 | INFO     | mean y: 3609244.890014472
[2025-11-30 23:00:07] 2025-11-30 21:59:16,635 | INFO     | intersect: -26247632924.62111
[2025-11-30 23:00:07] 2025-11-30 21:59:16,636 | INFO     | chi2: 6.408187728146173
[2025-11-30 23:00:07] 2025-11-30 21:59:16,637 | INFO     | sum of square deviations: 100103421443.02774
[2025-11-30 23:00:07] 2025-11-30 21:59:16,652 | INFO     | sum of deviations: 1818843184506.5317
[2025-11-30 23:00:07] 2025-11-30 21:59:16,652 | INFO     | mean x: 1764518735.4737608
[2025-11-30 23:00:07] 2025-11-30 21:59:16,652 | INFO     | mean y: 3629762.862973761
[2025-11-30 23:00:07] 2025-11-30 21:59:16,653 | INFO     | intersect: -32057041387.89387
[2025-11-30 23:00:07] 2025-11-30 21:59:16,654 | INFO     | chi2: 3.0186402415033284
[2025-11-30 23:00:07] 2025-11-30 21:59:16,654 | INFO     | current chi2=3.0186402415033284 (change=52.894010450961126 %)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,655 | INFO     | sum of square deviations: 97930682110.75192
[2025-11-30 23:00:07] 2025-11-30 21:59:16,670 | INFO     | sum of deviations: 1896789941436.3955
[2025-11-30 23:00:07] 2025-11-30 21:59:16,670 | INFO     | mean x: 1764518582.9809105
[2025-11-30 23:00:07] 2025-11-30 21:59:16,670 | INFO     | mean y: 3635222.8766519823
[2025-11-30 23:00:07] 2025-11-30 21:59:16,671 | INFO     | intersect: -34172794753.284317
[2025-11-30 23:00:07] 2025-11-30 21:59:16,672 | INFO     | chi2: 2.575347238036063
[2025-11-30 23:00:07] 2025-11-30 21:59:16,672 | INFO     | current chi2=2.575347238036063 (change=14.685188296784208 %)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,672 | INFO     | right removable region: 680
[2025-11-30 23:00:07] 2025-11-30 21:59:16,673 | INFO     | sum of square deviations: 100103055870.97382
[2025-11-30 23:00:07] 2025-11-30 21:59:16,688 | INFO     | sum of deviations: 1272445439895.086
[2025-11-30 23:00:07] 2025-11-30 21:59:16,688 | INFO     | mean x: 1764519040.4723032
[2025-11-30 23:00:07] 2025-11-30 21:59:16,688 | INFO     | mean y: 3626481.925655977
[2025-11-30 23:00:07] 2025-11-30 21:59:16,689 | INFO     | intersect: -22425800743.06354
[2025-11-30 23:00:07] 2025-11-30 21:59:16,690 | INFO     | chi2: 4.08171951935596
[2025-11-30 23:00:07] 2025-11-30 21:59:16,690 | INFO     | current chi2=4.08171951935596 (change=36.304620081147945 %)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,691 | INFO     | sum of square deviations: 97930118598.47006
[2025-11-30 23:00:07] 2025-11-30 21:59:16,706 | INFO     | sum of deviations: 1197372837617.9583
[2025-11-30 23:00:07] 2025-11-30 21:59:16,706 | INFO     | mean x: 1764519192.9720998
[2025-11-30 23:00:07] 2025-11-30 21:59:16,706 | INFO     | mean y: 3631748.8399412627
[2025-11-30 23:00:07] 2025-11-30 21:59:16,706 | INFO     | intersect: -21570807079.148575
[2025-11-30 23:00:07] 2025-11-30 21:59:16,707 | INFO     | chi2: 4.003135202202635
[2025-11-30 23:00:07] 2025-11-30 21:59:16,708 | INFO     | current chi2=4.003135202202635 (change=1.925274796091913 %)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,708 | INFO     | left removable region: 20
[2025-11-30 23:00:07] 2025-11-30 21:59:16,709 | INFO     | sum of square deviations: 89147389034.904
[2025-11-30 23:00:07] 2025-11-30 21:59:16,723 | INFO     | sum of deviations: 1474601042934.9714
[2025-11-30 23:00:07] 2025-11-30 21:59:16,723 | INFO     | mean x: 1764519162.4878788
[2025-11-30 23:00:07] 2025-11-30 21:59:16,723 | INFO     | mean y: 3665967.059090909
[2025-11-30 23:00:07] 2025-11-30 21:59:16,723 | INFO     | intersect: -29183524207.00892
[2025-11-30 23:00:07] 2025-11-30 21:59:16,724 | INFO     | chi2: 0.10349987947377803
[2025-11-30 23:00:07] 2025-11-30 21:59:16,725 | INFO     | current memory leak: 16.54 B/s (using 660 data points, chi2=0.10)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,726 | INFO     | could have reported an average CPU frequency of 2803 MHz (26 samples)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,726 | INFO     | ..............................
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . Timing measurements:
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . get job = 0 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . initial setup = 1 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . payload setup = 8 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . stage-in = 0 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . payload execution = 42104 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,727 | INFO     | . stage-out = 2 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,728 | INFO     | . log creation = 0 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,728 | INFO     | ..............................
[2025-11-30 23:00:07] 2025-11-30 21:59:16,959 | INFO     | 
[2025-11-30 23:00:07] 2025-11-30 21:59:16,960 | INFO     | job summary report
[2025-11-30 23:00:07] 2025-11-30 21:59:16,960 | INFO     | --------------------------------------------------
[2025-11-30 23:00:07] 2025-11-30 21:59:16,960 | INFO     | PanDA job id: 6893871905
[2025-11-30 23:00:07] 2025-11-30 21:59:16,960 | INFO     | task id: 47523449
[2025-11-30 23:00:07] 2025-11-30 21:59:16,960 | INFO     | errors: (none)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | pilot state: finished 
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | transexitcode: 0
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | exeerrorcode: 0
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | exeerrordiag: 
[2025-11-30 23:00:07] 2025-11-30 21:59:16,961 | INFO     | exitcode: 0
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | exitmsg: OK
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | cpuconsumptiontime: 489036 s
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | nevents: 1000
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | neventsw: 0
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | pid: 501403
[2025-11-30 23:00:07] 2025-11-30 21:59:16,962 | INFO     | pgrp: 501403
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | corecount: 12
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | event service: False
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | sizes: {0: 2283486, 1: 2284342, 2: 2284342, 6: 2284632, 12: 2284660, 42117: 2328485, 42120: 2337535, 42129: 2337725}
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | --------------------------------------------------
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | 
[2025-11-30 23:00:07] 2025-11-30 21:59:16,963 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2025-11-30 23:00:07] 2025-11-30 21:59:16,982 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,982 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,982 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,982 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,983 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,984 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,985 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,985 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,985 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,985 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 23:00:07] 2025-11-30 21:59:16,985 | INFO     | job 6893871905 has completed (purged errors)
[2025-11-30 23:00:07] 2025-11-30 21:59:16,986 | INFO     | overall cleanup function is called
[2025-11-30 23:00:07] 2025-11-30 21:59:18,009 | INFO     | --- collectZombieJob: --- 10, [501403]
[2025-11-30 23:00:07] 2025-11-30 21:59:18,010 | INFO     | zombie collector waiting for pid 501403
[2025-11-30 23:00:07] 2025-11-30 21:59:18,010 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 23:00:07] 2025-11-30 21:59:18,010 | INFO     | collected zombie processes
[2025-11-30 23:00:07] 2025-11-30 21:59:18,010 | INFO     | will attempt to kill all subprocesses of pid=501403
[2025-11-30 23:00:07] 2025-11-30 21:59:18,221 | INFO     | process IDs to be killed: [501403] (in reverse order)
[2025-11-30 23:00:07] 2025-11-30 21:59:18,284 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 23:00:07] 2025-11-30 21:59:18,284 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 23:00:07] 2025-11-30 21:59:18,292 | INFO     | did not find any defunct processes belonging to 501403
[2025-11-30 23:00:07] 2025-11-30 21:59:18,299 | INFO     | did not find any defunct processes belonging to 501403
[2025-11-30 23:00:07] 2025-11-30 21:59:18,300 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 23:00:07] 2025-11-30 21:59:18,301 | INFO     | ready for new job
[2025-11-30 23:00:07] 2025-11-30 21:59:18,301 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 23:00:07] 2025-11-30 21:59:18,304 | INFO     | ***************************************
[2025-11-30 23:00:07] 2025-11-30 21:59:18,304 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 23:00:07] 2025-11-30 21:59:18,304 | INFO     | ***************************************
[2025-11-30 23:00:07] 2025-11-30 21:59:18,304 | INFO     | 
[2025-11-30 23:00:07] 2025-11-30 21:59:18,306 | INFO     | architecture information:
[2025-11-30 23:00:07] 2025-11-30 21:59:18,306 | INFO     | executing command: cat /etc/os-release
[2025-11-30 23:00:07] 2025-11-30 21:59:18,319 | INFO     | cat /etc/os-release:
[2025-11-30 23:00:07] NAME="CentOS Linux"
[2025-11-30 23:00:07] VERSION="7 (Core)"
[2025-11-30 23:00:07] ID="centos"
[2025-11-30 23:00:07] ID_LIKE="rhel fedora"
[2025-11-30 23:00:07] VERSION_ID="7"
[2025-11-30 23:00:07] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 23:00:07] ANSI_COLOR="0;31"
[2025-11-30 23:00:07] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 23:00:07] HOME_URL="https://www.centos.org/"
[2025-11-30 23:00:07] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 23:00:07] 
[2025-11-30 23:00:07] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 23:00:07] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 23:00:07] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 23:00:07] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 23:00:07] 
[2025-11-30 23:00:07] 2025-11-30 21:59:18,320 | INFO     | ***************************************
[2025-11-30 23:00:07] 2025-11-30 21:59:18,823 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2025-11-30 23:00:07] 2025-11-30 21:59:18,839 | INFO     | sufficient remaining disk space (866223390720 B)
[2025-11-30 23:00:07] 2025-11-30 21:59:18,839 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 23:00:07] 2025-11-30 21:59:18,840 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 23:00:07] 2025-11-30 21:59:18,840 | INFO     | update_server=False
[2025-11-30 23:00:07] 2025-11-30 21:59:18,840 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 23:00:07] 2025-11-30 21:59:18,840 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:00:07] 2025-11-30 21:59:18,841 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 23:00:07] 2025-11-30 21:59:18,841 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 23:00:07] 2025-11-30 21:59:18,931 | INFO     | all job control threads have been joined
[2025-11-30 23:00:07] 2025-11-30 21:59:18,978 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 23:00:07] 2025-11-30 21:59:18,978 | INFO     | aborting loop
[2025-11-30 23:00:07] 2025-11-30 21:59:19,840 | INFO     | all data control threads have been joined
[2025-11-30 23:00:07] 2025-11-30 21:59:19,846 | INFO     | [job] retrieve thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:19,846 | INFO     | [job] queue monitor thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:19,876 | INFO     | [payload] failed_post thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:19,937 | INFO     | [job] control thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:19,984 | INFO     | [job] job monitor thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:19,992 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,098 | INFO     | all payload control threads have been joined
[2025-11-30 23:00:07] 2025-11-30 21:59:20,287 | INFO     | [job] validate thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,579 | INFO     | [data] copytool_in thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,662 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,845 | INFO     | [data] control thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,847 | INFO     | [data] copytool_out thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:20,942 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:21,097 | INFO     | [payload] validate_post thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:21,103 | INFO     | [payload] control thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:21,240 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:22,847 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 23:00:07] 2025-11-30 21:59:49,413 | INFO     | PID=493904 has CPU usage=7.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-11-30 23:00:07] 2025-11-30 21:59:49,413 | INFO     | .. there are 2 such processes running
[2025-11-30 23:00:07] 2025-11-30 21:59:49,414 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 23:00:07] 2025-11-30 21:59:49,414 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 23:00:07] 2025-11-30 21:59:49,415 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 23:00:07] 2025-11-30 22:00:01,909 | INFO     | [monitor] cgroup control has ended
[2025-11-30 23:00:07] 2025-11-30 22:00:02,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139893362677568)>', '<ExcThread(monitor, started 139892822619904)>']
[2025-11-30 23:00:07] 2025-11-30 22:00:02,470 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 23:00:07] 2025-11-30 22:00:02,470 | INFO     | [monitor] control thread has ended
[2025-11-30 23:00:07] 2025-11-30 22:00:07,350 | INFO     | all workflow threads have been joined
[2025-11-30 23:00:07] 2025-11-30 22:00:07,351 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 23:00:07] 2025-11-30 22:00:07,351 | INFO     | traces error code: 0
[2025-11-30 23:00:07] 2025-11-30 22:00:07,351 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 23:00:07] 2025-11-30 22:00:07,468 [wrapper] ==== pilot stdout END ====
[2025-11-30 23:00:07] 2025-11-30 22:00:07,471 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 23:00:07] 2025-11-30 22:00:07,473 [wrapper] pilotpid: 493904
[2025-11-30 23:00:07] 2025-11-30 22:00:07,476 [wrapper] Pilot exit status: 0
[2025-11-30 23:00:07] 2025-11-30 22:00:07,486 [wrapper] pandaids: 6893871905
[2025-11-30 23:00:07] 2025-11-30 22:00:07,526 [wrapper] cleanup supervisor_pilot  742827 493905
[2025-11-30 23:00:07] 2025-11-30 22:00:07,529 [wrapper] Test setup, not cleaning
[2025-11-30 23:00:07] 2025-11-30 22:00:07,532 [wrapper] apfmon messages muted
[2025-11-30 23:00:07] 2025-11-30 22:00:07,534 [wrapper] ==== wrapper stdout END ====
[2025-11-30 23:00:07] 2025-11-30 22:00:07,537 [wrapper] ==== wrapper stderr END ====
[2025-11-30 23:00:07]  *** Error codes and diagnostics ***
[2025-11-30 23:00:07]     "exeErrorCode": 0,
[2025-11-30 23:00:07]     "exeErrorDiag": "",
[2025-11-30 23:00:07]     "pilotErrorCode": 0,
[2025-11-30 23:00:07]     "pilotErrorDiag": "",
[2025-11-30 23:00:07]  *** Listing of results directory ***
[2025-11-30 23:00:07] total 1299072
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc    576529 Nov 20 16:07 pilot3.tar.gz
[2025-11-30 23:00:07] -rwx------. 1 boinc boinc     36292 Nov 20 16:13 runpilot2-wrapper.sh
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc      5112 Nov 20 16:13 queuedata.json
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc       100 Nov 30 11:16 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 23:00:07] -rwxr-xr-x. 1 boinc boinc      7986 Nov 30 11:16 run_atlas
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc       105 Nov 30 11:16 job.xml
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc 407573381 Nov 30 11:16 EVNT.47493127._000671.pool.root.1
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc      6293 Nov 30 11:16 init_data.xml
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc     15847 Nov 30 11:16 start_atlas.sh
[2025-11-30 23:00:07] drwxrwx--x. 2 boinc boinc        68 Nov 30 11:16 shared
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc    590096 Nov 30 11:16 input.tar.gz
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc         0 Nov 30 11:16 boinc_lockfile
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc      2785 Nov 30 11:16 pandaJob.out
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc    991788 Nov 30 11:16 agis_schedconf.cvmfs.json
[2025-11-30 23:00:07] drwx------. 5 boinc boinc      4096 Nov 30 11:16 pilot3
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc       533 Nov 30 22:48 boinc_task_state.xml
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc 902322911 Nov 30 22:58 HITS.47523449._006705.pool.root.1
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc      1033 Nov 30 22:59 memory_monitor_summary.json
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc   1516240 Nov 30 22:59 agis_ddmendpoints.agis.ALL.json
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc   2391592 Nov 30 22:59 log.47523449._006705.job.log.tgz.1
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc      8607 Nov 30 22:59 heartbeat.json
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc        95 Nov 30 22:59 pilot_heartbeat.json
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc      8192 Nov 30 22:59 boinc_mmap_file
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc        29 Nov 30 22:59 wrapper_checkpoint.txt
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc      4823 Nov 30 23:00 pilotlog.txt
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc   5829989 Nov 30 23:00 log.47523449._006705.job.log.1
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc       353 Nov 30 23:00 output.list
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc       620 Nov 30 23:00 runtime_log
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc   8243200 Nov 30 23:00 result.tar.gz
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc      8842 Nov 30 23:00 runtime_log.err
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc       665 Nov 30 23:00 jaiMDmTWLg8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmtBIKDms9hopn.diag
[2025-11-30 23:00:07] -rw-r--r--. 1 boinc boinc     21420 Nov 30 23:00 stderr.txt
[2025-11-30 23:00:07] HITS file was successfully produced:
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc 902322911 Nov 30 22:58 shared/HITS.pool.root.1
[2025-11-30 23:00:07]  *** Contents of shared directory: ***
[2025-11-30 23:00:07] total 1287848
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc 407573381 Nov 30 11:16 ATLAS.root_0
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc     15847 Nov 30 11:16 start_atlas.sh
[2025-11-30 23:00:07] -rw-r--r--. 2 boinc boinc    590096 Nov 30 11:16 input.tar.gz
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc 902322911 Nov 30 22:58 HITS.pool.root.1
[2025-11-30 23:00:07] -rw-------. 1 boinc boinc   8243200 Nov 30 23:00 result.tar.gz
23:00:08 (490060): run_atlas exited; CPU time 489442.465743
23:00:08 (490060): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN