Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
10:53:22 (1891667): wrapper (7.7.26015): starting
10:53:22 (1891667): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 10:53:22] Arguments: --nthreads 4
[2025-12-03 10:53:22] Threads: 4
[2025-12-03 10:53:22] Checking for CVMFS
[2025-12-03 10:53:23] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 10:53:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 10:53:23] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 10:53:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 10:53:23] 2.9.2.0 57880 12656 113052 153587 1 81 19343765 36864000 0 130560 1 5062167 99.949 677791 1060 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 10:53:23] CVMFS is ok
[2025-12-03 10:53:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 10:53:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 10:53:23] Further information can be found at the LHC@home message board.
[2025-12-03 10:53:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 10:53:23] Checking for apptainer binary...
[2025-12-03 10:53:23] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 10:53:23] Running /usr/bin/apptainer --version
[2025-12-03 10:53:23] apptainer version 1.4.1-1.1
[2025-12-03 10:53:23] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 10:53:23] magicA254
[2025-12-03 10:53:23] apptainer works
[2025-12-03 10:53:23] Set ATHENA_PROC_NUMBER=4
[2025-12-03 10:53:23] Set ATHENA_CORE_NUMBER=4
[2025-12-03 10:53:23] Starting ATLAS job with PandaID=6893852465
[2025-12-03 10:53:23] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 17:42:06]  *** The last 200 lines of the pilot log: ***
[2025-12-03 17:42:06] 2025-12-03 16:41:31,540 | INFO     | monitor loop #1864: job 0:6893852465 is in state 'finished'
[2025-12-03 17:42:06] 2025-12-03 16:41:31,541 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,574 | INFO     | time since job start (24482s) is within the limit (172800.0s)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,811 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-03 17:42:06] 2025-12-03 16:41:32,812 | INFO     | found 8 cores (8 cores per socket, 1 socket) HT, CPU MHz: 3439.382375
[2025-12-03 17:42:06] 2025-12-03 16:41:32,814 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6893852465/memory_monitor_summary.json (trf name=prmon)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,814 | INFO     | extracted standard info from prmon json
[2025-12-03 17:42:06] 2025-12-03 16:41:32,814 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 17:42:06] 2025-12-03 16:41:32,814 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 17:42:06] 2025-12-03 16:41:32,817 | INFO     | fitting pss+swap vs Time
[2025-12-03 17:42:06] 2025-12-03 16:41:32,817 | INFO     | sum of square deviations: 19994421400.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,819 | INFO     | sum of deviations: 224745444489.00003
[2025-12-03 17:42:06] 2025-12-03 16:41:32,819 | INFO     | mean x: 1764767833.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,819 | INFO     | mean y: 2357896.403990025
[2025-12-03 17:42:06] 2025-12-03 16:41:32,819 | INFO     | intersect: -19834351709.38007
[2025-12-03 17:42:06] 2025-12-03 16:41:32,820 | INFO     | chi2: 3.7880133627531576
[2025-12-03 17:42:06] 2025-12-03 16:41:32,820 | INFO     | sum of square deviations: 19255784295.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | sum of deviations: 272632953663.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | mean x: 1764767680.5
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | mean y: 2367723.6919191917
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | intersect: -24984089223.099327
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | chi2: 2.680756633822974
[2025-12-03 17:42:06] 2025-12-03 16:41:32,821 | INFO     | current chi2=2.680756633822974 (change=29.23053914797758 %)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,822 | INFO     | sum of square deviations: 18535566140.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | sum of deviations: 267282167436.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | mean x: 1764767528.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | mean y: 2366590.514066496
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | intersect: -25445514868.39625
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | chi2: 2.6784676934578964
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | current chi2=2.6784676934578964 (change=0.0853841164169094 %)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,823 | INFO     | right removable region: 390
[2025-12-03 17:42:06] 2025-12-03 16:41:32,824 | INFO     | sum of square deviations: 19255784295.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | sum of deviations: 131535777054.00002
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | mean x: 1764767985.5
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | mean y: 2377109.595959596
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | intersect: -12052708507.095343
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | chi2: 1.5812934235216094
[2025-12-03 17:42:06] 2025-12-03 16:41:32,825 | INFO     | current chi2=1.5812934235216094 (change=58.255336713693296 %)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,826 | INFO     | sum of square deviations: 18535566140.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | sum of deviations: 97420625291.00002
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | mean x: 1764768138.0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | mean y: 2384297.9411764704
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | intersect: -9273017068.223612
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | chi2: 1.193407388430228
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | current chi2=1.193407388430228 (change=24.52966851829069 %)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | left removable region: 20
[2025-12-03 17:42:06] 2025-12-03 16:41:32,827 | INFO     | sum of square deviations: 15706536352.5
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | sum of deviations: 123600517237.5
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | mean x: 1764768107.5
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | mean y: 2397952.3486486487
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | intersect: -13885212020.713615
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | chi2: 0.06888168501155605
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | current memory leak: 7.87 B/s (using 370 data points, chi2=0.07)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | could have reported an average CPU frequency of 3783 MHz (17 samples)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | ..............................
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . Timing measurements:
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . get job = 0 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . initial setup = 1 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . payload setup = 4 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . stage-in = 0 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . payload execution = 24451 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,829 | INFO     | . stage-out = 1 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,830 | INFO     | . log creation = 0 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,830 | INFO     | ..............................
[2025-12-03 17:42:06] 2025-12-03 16:41:32,971 | INFO     | 
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | job summary report
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | --------------------------------------------------
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | PanDA job id: 6893852465
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | task id: 47523449
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | errors: (none)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | pilot state: finished 
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | transexitcode: 0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | exeerrorcode: 0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | exeerrordiag: 
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | exitcode: 0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | exitmsg: OK
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | cpuconsumptiontime: 95899 s
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | nevents: 1000
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | neventsw: 0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | pid: 1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | pgrp: 1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | corecount: 4
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | event service: False
[2025-12-03 17:42:06] 2025-12-03 16:41:32,972 | INFO     | sizes: {0: 2284141, 1: 2284340, 4: 2284602, 11: 2284630, 24459: 2321439, 24461: 2330439, 24462: 2330623, 24468: 2330933}
[2025-12-03 17:42:06] 2025-12-03 16:41:32,973 | INFO     | --------------------------------------------------
[2025-12-03 17:42:06] 2025-12-03 16:41:32,973 | INFO     | 
[2025-12-03 17:42:06] 2025-12-03 16:41:32,973 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,992 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,993 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,993 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 17:42:06] 2025-12-03 16:41:32,993 | INFO     | job 6893852465 has completed (purged errors)
[2025-12-03 17:42:06] 2025-12-03 16:41:32,993 | INFO     | overall cleanup function is called
[2025-12-03 17:42:06] 2025-12-03 16:41:34,002 | INFO     | --- collectZombieJob: --- 10, [1902030]
[2025-12-03 17:42:06] 2025-12-03 16:41:34,003 | INFO     | zombie collector waiting for pid 1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:34,003 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 17:42:06] 2025-12-03 16:41:34,003 | INFO     | collected zombie processes
[2025-12-03 17:42:06] 2025-12-03 16:41:34,003 | INFO     | will attempt to kill all subprocesses of pid=1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:34,052 | INFO     | process IDs to be killed: [1902030] (in reverse order)
[2025-12-03 17:42:06] 2025-12-03 16:41:34,085 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 17:42:06] 2025-12-03 16:41:34,085 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 17:42:06] 2025-12-03 16:41:34,087 | INFO     | did not find any defunct processes belonging to 1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:34,089 | INFO     | did not find any defunct processes belonging to 1902030
[2025-12-03 17:42:06] 2025-12-03 16:41:34,089 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 17:42:06] 2025-12-03 16:41:34,089 | INFO     | ready for new job
[2025-12-03 17:42:06] 2025-12-03 16:41:34,089 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 17:42:06] 2025-12-03 16:41:34,091 | INFO     | ***************************************
[2025-12-03 17:42:06] 2025-12-03 16:41:34,091 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 17:42:06] 2025-12-03 16:41:34,091 | INFO     | ***************************************
[2025-12-03 17:42:06] 2025-12-03 16:41:34,091 | INFO     | 
[2025-12-03 17:42:06] 2025-12-03 16:41:34,091 | INFO     | architecture information:
[2025-12-03 17:42:06] 2025-12-03 16:41:34,092 | INFO     | executing command: cat /etc/os-release
[2025-12-03 17:42:06] 2025-12-03 16:41:34,105 | INFO     | cat /etc/os-release:
[2025-12-03 17:42:06] NAME="CentOS Linux"
[2025-12-03 17:42:06] VERSION="7 (Core)"
[2025-12-03 17:42:06] ID="centos"
[2025-12-03 17:42:06] ID_LIKE="rhel fedora"
[2025-12-03 17:42:06] VERSION_ID="7"
[2025-12-03 17:42:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 17:42:06] ANSI_COLOR="0;31"
[2025-12-03 17:42:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 17:42:06] HOME_URL="https://www.centos.org/"
[2025-12-03 17:42:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 17:42:06] 
[2025-12-03 17:42:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 17:42:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 17:42:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 17:42:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 17:42:06] 
[2025-12-03 17:42:06] 2025-12-03 16:41:34,105 | INFO     | ***************************************
[2025-12-03 17:42:06] 2025-12-03 16:41:34,608 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 17:42:06] 2025-12-03 16:41:34,625 | INFO     | sufficient remaining disk space (337008132096 B)
[2025-12-03 17:42:06] 2025-12-03 16:41:34,626 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 17:42:06] 2025-12-03 16:41:34,626 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 17:42:06] 2025-12-03 16:41:34,626 | INFO     | update_server=False
[2025-12-03 17:42:06] 2025-12-03 16:41:34,626 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 17:42:06] 2025-12-03 16:41:34,626 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 17:42:06] 2025-12-03 16:41:35,049 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 17:42:06] 2025-12-03 16:41:35,050 | INFO     | aborting loop
[2025-12-03 17:42:06] 2025-12-03 16:41:35,308 | INFO     | all data control threads have been joined
[2025-12-03 17:42:06] 2025-12-03 16:41:35,523 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 17:42:06] 2025-12-03 16:41:35,573 | INFO     | all payload control threads have been joined
[2025-12-03 17:42:06] 2025-12-03 16:41:35,631 | INFO     | [job] queue monitor thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:35,632 | INFO     | [job] retrieve thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:35,787 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,055 | INFO     | [job] job monitor thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,059 | INFO     | all job control threads have been joined
[2025-12-03 17:42:06] 2025-12-03 16:41:36,120 | INFO     | [job] validate thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,140 | INFO     | [data] copytool_in thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,140 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,175 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,314 | INFO     | [data] control thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,450 | INFO     | [payload] failed_post thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:36,579 | INFO     | [payload] control thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:37,065 | INFO     | [job] control thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:37,094 | INFO     | [payload] validate_post thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:37,293 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 17:42:06] 2025-12-03 16:41:37,530 | INFO     | [data] copytool_out thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:41,300 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:41:44,844 | INFO     | job.realtimelogging is not enabled
[2025-12-03 17:42:06] 2025-12-03 16:41:45,850 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 17:42:06] 2025-12-03 16:42:00,451 | INFO     | [monitor] cgroup control has ended
[2025-12-03 17:42:06] 2025-12-03 16:42:01,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139688254637888)>', '<ExcThread(monitor, started 139687586928384)>']
[2025-12-03 17:42:06] 2025-12-03 16:42:05,691 | INFO     | PID=1895460 has CPU usage=2.6% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 17:42:06] 2025-12-03 16:42:05,692 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 17:42:06] 2025-12-03 16:42:05,692 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 17:42:06] 2025-12-03 16:42:05,692 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 17:42:06] 2025-12-03 16:42:05,692 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 17:42:06] 2025-12-03 16:42:05,692 | INFO     | [monitor] control thread has ended
[2025-12-03 17:42:06] 2025-12-03 16:42:06,541 | INFO     | all workflow threads have been joined
[2025-12-03 17:42:06] 2025-12-03 16:42:06,541 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 17:42:06] 2025-12-03 16:42:06,542 | INFO     | traces error code: 0
[2025-12-03 17:42:06] 2025-12-03 16:42:06,542 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 17:42:06] 2025-12-03 16:42:06,621 [wrapper] ==== pilot stdout END ====
[2025-12-03 17:42:06] 2025-12-03 16:42:06,625 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 17:42:06] 2025-12-03 16:42:06,629 [wrapper] pilotpid: 1895460
[2025-12-03 17:42:06] 2025-12-03 16:42:06,633 [wrapper] Pilot exit status: 0
[2025-12-03 17:42:06] 2025-12-03 16:42:06,644 [wrapper] pandaids: 6893852465
[2025-12-03 17:42:06] 2025-12-03 16:42:06,666 [wrapper] cleanup supervisor_pilot 1947915 1895461
[2025-12-03 17:42:06] 2025-12-03 16:42:06,669 [wrapper] Test setup, not cleaning
[2025-12-03 17:42:06] 2025-12-03 16:42:06,673 [wrapper] apfmon messages muted
[2025-12-03 17:42:06] 2025-12-03 16:42:06,676 [wrapper] ==== wrapper stdout END ====
[2025-12-03 17:42:06] 2025-12-03 16:42:06,680 [wrapper] ==== wrapper stderr END ====
[2025-12-03 17:42:06]  *** Error codes and diagnostics ***
[2025-12-03 17:42:06]     "exeErrorCode": 0,
[2025-12-03 17:42:06]     "exeErrorDiag": "",
[2025-12-03 17:42:06]     "pilotErrorCode": 0,
[2025-12-03 17:42:06]     "pilotErrorDiag": "",
[2025-12-03 17:42:06]  *** Listing of results directory ***
[2025-12-03 17:42:06] total 1309136
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc    576529 Nov 20 12:54 pilot3.tar.gz
[2025-12-03 17:42:06] -rwx------ 1 boinc boinc     36292 Nov 20 12:56 runpilot2-wrapper.sh
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc      5112 Nov 20 12:56 queuedata.json
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc       100 Dec  3 10:53 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 17:42:06] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 10:53 run_atlas
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc       105 Dec  3 10:53 job.xml
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc 410876185 Dec  3 10:53 EVNT.47493127._000385.pool.root.1
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc    590101 Dec  3 10:53 input.tar.gz
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc     15847 Dec  3 10:53 start_atlas.sh
[2025-12-03 17:42:06] drwxrwx--x 2 boinc boinc      4096 Dec  3 10:53 shared
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc         0 Dec  3 10:53 boinc_setup_complete
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc      6380 Dec  3 10:53 init_data.xml
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc         0 Dec  3 10:53 boinc_lockfile
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc      2783 Dec  3 10:53 pandaJob.out
[2025-12-03 17:42:06] -rw------- 1 boinc boinc    985783 Dec  3 10:53 agis_schedconf.cvmfs.json
[2025-12-03 17:42:06] drwx------ 5 boinc boinc      4096 Dec  3 10:53 pilot3
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc       531 Dec  3 17:37 boinc_task_state.xml
[2025-12-03 17:42:06] -rw------- 1 boinc boinc 916352233 Dec  3 17:41 HITS.47523449._003841.pool.root.1
[2025-12-03 17:42:06] -rw------- 1 boinc boinc      1030 Dec  3 17:41 memory_monitor_summary.json
[2025-12-03 17:42:06] -rw------- 1 boinc boinc   1516240 Dec  3 17:41 agis_ddmendpoints.agis.ALL.json
[2025-12-03 17:42:06] -rw------- 1 boinc boinc   1253588 Dec  3 17:41 log.47523449._003841.job.log.tgz.1
[2025-12-03 17:42:06] -rw------- 1 boinc boinc      8574 Dec  3 17:41 heartbeat.json
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc        28 Dec  3 17:42 wrapper_checkpoint.txt
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc      8192 Dec  3 17:42 boinc_mmap_file
[2025-12-03 17:42:06] -rw------- 1 boinc boinc        95 Dec  3 17:42 pilot_heartbeat.json
[2025-12-03 17:42:06] -rw------- 1 boinc boinc      4824 Dec  3 17:42 pilotlog.txt
[2025-12-03 17:42:06] -rw------- 1 boinc boinc   3452895 Dec  3 17:42 log.47523449._003841.job.log.1
[2025-12-03 17:42:06] -rw------- 1 boinc boinc       353 Dec  3 17:42 output.list
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc       620 Dec  3 17:42 runtime_log
[2025-12-03 17:42:06] -rw------- 1 boinc boinc   4730880 Dec  3 17:42 result.tar.gz
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc      8913 Dec  3 17:42 runtime_log.err
[2025-12-03 17:42:06] -rw------- 1 boinc boinc       668 Dec  3 17:42 e5vKDmrRIg8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmqaGKDmLVvYBo.diag
[2025-12-03 17:42:06] -rw-r--r-- 1 boinc boinc     21240 Dec  3 17:42 stderr.txt
[2025-12-03 17:42:06] HITS file was successfully produced:
[2025-12-03 17:42:06] -rw------- 1 boinc boinc 916352233 Dec  3 17:41 shared/HITS.pool.root.1
[2025-12-03 17:42:06]  *** Contents of shared directory: ***
[2025-12-03 17:42:06] total 1301348
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc 410876185 Dec  3 10:53 ATLAS.root_0
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc    590101 Dec  3 10:53 input.tar.gz
[2025-12-03 17:42:06] -rw-r--r-- 2 boinc boinc     15847 Dec  3 10:53 start_atlas.sh
[2025-12-03 17:42:06] -rw------- 1 boinc boinc 916352233 Dec  3 17:41 HITS.pool.root.1
[2025-12-03 17:42:06] -rw------- 1 boinc boinc   4730880 Dec  3 17:42 result.tar.gz
17:42:08 (1891667): run_atlas exited; CPU time 95876.864135
17:42:08 (1891667): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN