Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
12:02:51 (13932): wrapper (7.7.26015): starting
12:02:51 (13932): wrapper: running run_atlas (--nthreads 8)
[2025-11-29 12:02:51] Arguments: --nthreads 8
[2025-11-29 12:02:51] Threads: 8
[2025-11-29 12:02:51] Checking for CVMFS
[2025-11-29 12:02:51] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 12:02:51] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 12:02:51] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 12:02:51] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 12:02:51] 2.11.2.0 2781 76204 85468 153449 3 81 13931640 20275201 1 130560 0 22131693 99.881 4189555 33665 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 12:02:51] CVMFS is ok
[2025-11-29 12:02:51] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 12:02:51] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 12:02:51] Further information can be found at the LHC@home message board.
[2025-11-29 12:02:51] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 12:02:51] Checking for apptainer binary...
[2025-11-29 12:02:51] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 12:02:51] Running /usr/bin/apptainer --version
[2025-11-29 12:02:51] apptainer version 1.3.2-1.el7
[2025-11-29 12:02:51] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 12:02:53] c-115-16.aglt2.org
[2025-11-29 12:02:53] apptainer works
[2025-11-29 12:02:53] Set ATHENA_PROC_NUMBER=8
[2025-11-29 12:02:53] Set ATHENA_CORE_NUMBER=8
[2025-11-29 12:02:53] Starting ATLAS job with PandaID=6899448740
[2025-11-29 12:02:53] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 23:23:27]  *** The last 200 lines of the pilot log: ***
[2025-11-29 23:23:27] 2025-11-30 04:22:54,196 | INFO     | monitor loop #2999: job 0:6899448740 is in state 'finished'
[2025-11-29 23:23:27] 2025-11-30 04:22:54,197 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,715 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 23:23:27] 2025-11-30 04:22:54,718 | INFO     | found 8 cores (4 cores per socket, 2 sockets) , CPU MHz: 1745.625
[2025-11-29 23:23:27] 2025-11-30 04:22:54,721 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6899448740/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,721 | INFO     | extracted standard info from prmon json
[2025-11-29 23:23:27] 2025-11-30 04:22:54,722 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 23:23:27] 2025-11-30 04:22:54,722 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 23:23:27] 2025-11-30 04:22:54,733 | INFO     | fitting pss+swap vs Time
[2025-11-29 23:23:27] 2025-11-30 04:22:54,734 | INFO     | sum of square deviations: 92429417327.86832
[2025-11-29 23:23:27] 2025-11-30 04:22:54,743 | INFO     | sum of deviations: 686915995817.658
[2025-11-29 23:23:27] 2025-11-30 04:22:54,743 | INFO     | mean x: 1764456165.0958083
[2025-11-29 23:23:27] 2025-11-30 04:22:54,743 | INFO     | mean y: 3168694.7709580837
[2025-11-29 23:23:27] 2025-11-30 04:22:54,743 | INFO     | intersect: -13109898538.186205
[2025-11-29 23:23:27] 2025-11-30 04:22:54,744 | INFO     | chi2: 6.15919473070837
[2025-11-29 23:23:27] 2025-11-30 04:22:54,745 | INFO     | sum of square deviations: 90369537301.07945
[2025-11-29 23:23:27] 2025-11-30 04:22:54,753 | INFO     | sum of deviations: 930257727666.6721
[2025-11-29 23:23:27] 2025-11-30 04:22:54,753 | INFO     | mean x: 1764456012.6003017
[2025-11-29 23:23:27] 2025-11-30 04:22:54,753 | INFO     | mean y: 3186711.636500754
[2025-11-29 23:23:27] 2025-11-30 04:22:54,753 | INFO     | intersect: -18160000683.921265
[2025-11-29 23:23:27] 2025-11-30 04:22:54,754 | INFO     | chi2: 3.15404469933598
[2025-11-29 23:23:27] 2025-11-30 04:22:54,754 | INFO     | current chi2=3.15404469933598 (change=48.79128137302402 %)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,755 | INFO     | sum of square deviations: 88340495061.76472
[2025-11-29 23:23:27] 2025-11-30 04:22:54,763 | INFO     | sum of deviations: 1008918251179.1776
[2025-11-29 23:23:27] 2025-11-30 04:22:54,763 | INFO     | mean x: 1764455860.1048632
[2025-11-29 23:23:27] 2025-11-30 04:22:54,763 | INFO     | mean y: 3192614.4756838907
[2025-11-29 23:23:27] 2025-11-30 04:22:54,763 | INFO     | intersect: -20148287399.477142
[2025-11-29 23:23:27] 2025-11-30 04:22:54,764 | INFO     | chi2: 2.689210150080679
[2025-11-29 23:23:27] 2025-11-30 04:22:54,764 | INFO     | current chi2=2.689210150080679 (change=14.73772864896818 %)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,764 | INFO     | right removable region: 657
[2025-11-29 23:23:27] 2025-11-30 04:22:54,765 | INFO     | sum of square deviations: 90369294521.07942
[2025-11-29 23:23:27] 2025-11-30 04:22:54,774 | INFO     | sum of deviations: 477034914237.6403
[2025-11-29 23:23:27] 2025-11-30 04:22:54,774 | INFO     | mean x: 1764456317.6003017
[2025-11-29 23:23:27] 2025-11-30 04:22:54,774 | INFO     | mean y: 3184203.794871795
[2025-11-29 23:23:27] 2025-11-30 04:22:54,774 | INFO     | intersect: -9310900548.146917
[2025-11-29 23:23:27] 2025-11-30 04:22:54,775 | INFO     | chi2: 3.715989803467754
[2025-11-29 23:23:27] 2025-11-30 04:22:54,775 | INFO     | current chi2=3.715989803467754 (change=39.66760321863735 %)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,775 | INFO     | sum of square deviations: 88340211717.77489
[2025-11-29 23:23:27] 2025-11-30 04:22:54,784 | INFO     | sum of deviations: 428533659222.0066
[2025-11-29 23:23:27] 2025-11-30 04:22:54,784 | INFO     | mean x: 1764456470.0972645
[2025-11-29 23:23:27] 2025-11-30 04:22:54,784 | INFO     | mean y: 3187847.2811550153
[2025-11-29 23:23:27] 2025-11-30 04:22:54,784 | INFO     | intersect: -8556096457.859191
[2025-11-29 23:23:27] 2025-11-30 04:22:54,785 | INFO     | chi2: 3.651297372035138
[2025-11-29 23:23:27] 2025-11-30 04:22:54,785 | INFO     | current chi2=3.651297372035138 (change=1.740920585203044 %)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,785 | INFO     | left removable region: 20
[2025-11-29 23:23:27] 2025-11-30 04:22:54,786 | INFO     | sum of square deviations: 80149406607.44743
[2025-11-29 23:23:27] 2025-11-30 04:22:54,793 | INFO     | sum of deviations: 686361417390.7094
[2025-11-29 23:23:27] 2025-11-30 04:22:54,794 | INFO     | mean x: 1764456439.610675
[2025-11-29 23:23:27] 2025-11-30 04:22:54,794 | INFO     | mean y: 3218419.954474097
[2025-11-29 23:23:27] 2025-11-30 04:22:54,794 | INFO     | intersect: -15106747755.426006
[2025-11-29 23:23:27] 2025-11-30 04:22:54,794 | INFO     | chi2: 0.09771876182573047
[2025-11-29 23:23:27] 2025-11-30 04:22:54,795 | INFO     | current memory leak: 8.56 B/s (using 637 data points, chi2=0.10)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,795 | INFO     | could have reported an average CPU frequency of 2390 MHz (26 samples)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,795 | INFO     | ..............................
[2025-11-29 23:23:27] 2025-11-30 04:22:54,795 | INFO     | . Timing measurements:
[2025-11-29 23:23:27] 2025-11-30 04:22:54,795 | INFO     | . get job = 0 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . initial setup = 2 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . payload setup = 8 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . stage-in = 0 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . payload execution = 40746 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . stage-out = 3 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | . log creation = 0 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,796 | INFO     | ..............................
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | 
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | job summary report
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | --------------------------------------------------
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | PanDA job id: 6899448740
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | task id: 47556173
[2025-11-29 23:23:27] 2025-11-30 04:22:54,877 | INFO     | errors: (none)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | pilot state: finished 
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | transexitcode: 0
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | exeerrorcode: 0
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | exeerrordiag: 
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | exitcode: 0
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | exitmsg: OK
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | cpuconsumptiontime: 316255 s
[2025-11-29 23:23:27] 2025-11-30 04:22:54,878 | INFO     | nevents: 1000
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | neventsw: 0
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | pid: 24111
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | pgrp: 24111
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | corecount: 8
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | event service: False
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | sizes: {0: 2284089, 1: 2284344, 6: 2284606, 12: 2284634, 40758: 2327164, 40762: 2336342, 40768: 2336532}
[2025-11-29 23:23:27] 2025-11-30 04:22:54,879 | INFO     | --------------------------------------------------
[2025-11-29 23:23:27] 2025-11-30 04:22:54,880 | INFO     | 
[2025-11-29 23:23:27] 2025-11-30 04:22:54,880 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 23:23:27] 2025-11-30 04:22:54,908 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,908 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,908 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,908 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,909 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,909 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,909 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,909 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,909 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,910 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,910 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,910 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,910 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,910 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,911 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 23:23:27] 2025-11-30 04:22:54,912 | INFO     | job 6899448740 has completed (purged errors)
[2025-11-29 23:23:27] 2025-11-30 04:22:54,912 | INFO     | overall cleanup function is called
[2025-11-29 23:23:27] 2025-11-30 04:22:55,926 | INFO     | --- collectZombieJob: --- 10, [24111]
[2025-11-29 23:23:27] 2025-11-30 04:22:55,927 | INFO     | zombie collector waiting for pid 24111
[2025-11-29 23:23:27] 2025-11-30 04:22:55,927 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 23:23:27] 2025-11-30 04:22:55,927 | INFO     | collected zombie processes
[2025-11-29 23:23:27] 2025-11-30 04:22:55,927 | INFO     | will attempt to kill all subprocesses of pid=24111
[2025-11-29 23:23:27] 2025-11-30 04:22:56,017 | INFO     | process IDs to be killed: [24111] (in reverse order)
[2025-11-29 23:23:27] 2025-11-30 04:22:56,072 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 23:23:27] 2025-11-30 04:22:56,072 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 23:23:27] 2025-11-30 04:22:56,076 | INFO     | did not find any defunct processes belonging to 24111
[2025-11-29 23:23:27] 2025-11-30 04:22:56,079 | INFO     | did not find any defunct processes belonging to 24111
[2025-11-29 23:23:27] 2025-11-30 04:22:56,082 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 23:23:27] 2025-11-30 04:22:56,082 | INFO     | ready for new job
[2025-11-29 23:23:27] 2025-11-30 04:22:56,082 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 23:23:27] 2025-11-30 04:22:56,086 | INFO     | ***************************************
[2025-11-29 23:23:27] 2025-11-30 04:22:56,086 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 23:23:27] 2025-11-30 04:22:56,086 | INFO     | ***************************************
[2025-11-29 23:23:27] 2025-11-30 04:22:56,086 | INFO     | 
[2025-11-29 23:23:27] 2025-11-30 04:22:56,087 | INFO     | architecture information:
[2025-11-29 23:23:27] 2025-11-30 04:22:56,087 | INFO     | executing command: cat /etc/os-release
[2025-11-29 23:23:27] 2025-11-30 04:22:56,112 | INFO     | cat /etc/os-release:
[2025-11-29 23:23:27] NAME="CentOS Linux"
[2025-11-29 23:23:27] VERSION="7 (Core)"
[2025-11-29 23:23:27] ID="centos"
[2025-11-29 23:23:27] ID_LIKE="rhel fedora"
[2025-11-29 23:23:27] VERSION_ID="7"
[2025-11-29 23:23:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 23:23:27] ANSI_COLOR="0;31"
[2025-11-29 23:23:27] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 23:23:27] HOME_URL="https://www.centos.org/"
[2025-11-29 23:23:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 23:23:27] 
[2025-11-29 23:23:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 23:23:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 23:23:27] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 23:23:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 23:23:27] 
[2025-11-29 23:23:27] 2025-11-30 04:22:56,112 | INFO     | ***************************************
[2025-11-29 23:23:27] 2025-11-30 04:22:56,616 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 23:23:27] 2025-11-30 04:22:56,636 | INFO     | sufficient remaining disk space (17453547520 B)
[2025-11-29 23:23:27] 2025-11-30 04:22:56,636 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 23:23:27] 2025-11-30 04:22:56,637 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 23:23:27] 2025-11-30 04:22:56,637 | INFO     | update_server=False
[2025-11-29 23:23:27] 2025-11-30 04:22:56,637 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 23:23:27] 2025-11-30 04:22:56,637 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 23:23:27] 2025-11-30 04:22:56,686 | INFO     | all data control threads have been joined
[2025-11-29 23:23:27] 2025-11-30 04:22:56,700 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 23:23:27] 2025-11-30 04:22:56,700 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 23:23:27] 2025-11-30 04:22:56,701 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 23:23:27] 2025-11-30 04:22:56,701 | INFO     | will abort loop
[2025-11-29 23:23:27] 2025-11-30 04:22:56,703 | INFO     | all job control threads have been joined
[2025-11-29 23:23:27] 2025-11-30 04:22:56,948 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 23:23:27] 2025-11-30 04:22:57,641 | INFO     | [job] queue monitor thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:57,641 | INFO     | [job] retrieve thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:57,691 | INFO     | [data] control thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:57,705 | INFO     | all payload control threads have been joined
[2025-11-29 23:23:27] 2025-11-30 04:22:57,708 | INFO     | [job] control thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:57,710 | INFO     | [job] job monitor thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:57,731 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,125 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,252 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,520 | INFO     | [job] validate thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,537 | INFO     | [data] copytool_in thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,564 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,571 | INFO     | [payload] failed_post thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,711 | INFO     | [payload] control thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:58,954 | INFO     | [data] copytool_out thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:59,126 | INFO     | [payload] validate_post thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:22:59,620 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 23:23:27] 2025-11-30 04:23:03,626 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 23:23:27] 2025-11-30 04:23:17,321 | INFO     | [monitor] cgroup control has ended
[2025-11-29 23:23:27] 2025-11-30 04:23:18,326 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698071164736)>', '<ExcThread(monitor, started 140697776658176)>']
[2025-11-29 23:23:27] 2025-11-30 04:23:23,336 | INFO     | all workflow threads have been joined
[2025-11-29 23:23:27] 2025-11-30 04:23:23,336 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 23:23:27] 2025-11-30 04:23:23,337 | INFO     | traces error code: 0
[2025-11-29 23:23:27] 2025-11-30 04:23:23,338 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 23:23:27] 2025-11-30 04:23:26,818 | INFO     | PID=17728 has CPU usage=4.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 23:23:27] 2025-11-30 04:23:26,819 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 23:23:27] 2025-11-30 04:23:26,819 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 23:23:27] 2025-11-30 04:23:26,819 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 23:23:27] 2025-11-30 04:23:26,819 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 23:23:27] 2025-11-30 04:23:26,819 | INFO     | [monitor] control thread has ended
[2025-11-29 23:23:27] 2025-11-30 04:23:26,933 [wrapper] ==== pilot stdout END ====
[2025-11-29 23:23:27] 2025-11-30 04:23:26,938 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 23:23:27] 2025-11-30 04:23:26,943 [wrapper] pilotpid: 17728
[2025-11-29 23:23:27] 2025-11-30 04:23:26,948 [wrapper] Pilot exit status: 0
[2025-11-29 23:23:27] 2025-11-30 04:23:26,964 [wrapper] pandaids: 6899448740
[2025-11-29 23:23:27] 2025-11-30 04:23:27,008 [wrapper] cleanup supervisor_pilot  5916 17729
[2025-11-29 23:23:27] 2025-11-30 04:23:27,012 [wrapper] Test setup, not cleaning
[2025-11-29 23:23:27] 2025-11-30 04:23:27,017 [wrapper] apfmon messages muted
[2025-11-29 23:23:27] 2025-11-30 04:23:27,021 [wrapper] ==== wrapper stdout END ====
[2025-11-29 23:23:27] 2025-11-30 04:23:27,025 [wrapper] ==== wrapper stderr END ====
[2025-11-29 23:23:27]  *** Error codes and diagnostics ***
[2025-11-29 23:23:27]     "exeErrorCode": 0,
[2025-11-29 23:23:27]     "exeErrorDiag": "",
[2025-11-29 23:23:27]     "pilotErrorCode": 0,
[2025-11-29 23:23:27]     "pilotErrorDiag": "",
[2025-11-29 23:23:27]  *** Listing of results directory ***
[2025-11-29 23:23:27] total 1330428
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas    576529 Nov 26 20:09 pilot3.tar.gz
[2025-11-29 23:23:27] -rwx------ 1 boincer umatlas     36292 Nov 26 20:29 runpilot2-wrapper.sh
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas      5112 Nov 26 20:31 queuedata.json
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas       100 Nov 29 12:02 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 23:23:27] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 12:02 run_atlas
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas       105 Nov 29 12:02 job.xml
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas 412625694 Nov 29 12:02 EVNT.47483658._003301.pool.root.1
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 12:02 start_atlas.sh
[2025-11-29 23:23:27] drwxrwx--x 2 boincer umatlas      4096 Nov 29 12:02 shared
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas    590111 Nov 29 12:02 input.tar.gz
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas         0 Nov 29 12:02 boinc_lockfile
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas      2787 Nov 29 12:02 pandaJob.out
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas        57 Nov 29 12:02 setup.sh.local
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas    991834 Nov 29 12:03 agis_schedconf.cvmfs.json
[2025-11-29 23:23:27] drwx------ 5 boincer umatlas      4096 Nov 29 12:03 pilot3
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas       532 Nov 29 23:09 boinc_task_state.xml
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas      5913 Nov 29 23:21 init_data.xml
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas 930681706 Nov 29 23:22 HITS.47556173._002575.pool.root.1
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas      1061 Nov 29 23:22 memory_monitor_summary.json
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas   1516240 Nov 29 23:22 agis_ddmendpoints.agis.ALL.json
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas   1934674 Nov 29 23:22 log.47556173._002575.job.log.tgz.1
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas        95 Nov 29 23:22 pilot_heartbeat.json
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas      7976 Nov 29 23:22 heartbeat.json
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas        29 Nov 29 23:23 wrapper_checkpoint.txt
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 23:23 boinc_mmap_file
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas       745 Nov 29 23:23 pilotlog.txt
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas   5634831 Nov 29 23:23 log.47556173._002575.job.log.1
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas       353 Nov 29 23:23 output.list
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas       620 Nov 29 23:23 runtime_log
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas   7587840 Nov 29 23:23 result.tar.gz
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas      9343 Nov 29 23:23 runtime_log.err
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas       668 Nov 29 23:23 DZWMDmF0fi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmxgNKDmspu9mm.diag
[2025-11-29 23:23:27] -rw-r--r-- 1 boincer umatlas     21275 Nov 29 23:23 stderr.txt
[2025-11-29 23:23:27] HITS file was successfully produced:
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas 930681706 Nov 29 23:22 shared/HITS.pool.root.1
[2025-11-29 23:23:27]  *** Contents of shared directory: ***
[2025-11-29 23:23:27] total 1319840
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas 412625694 Nov 29 12:02 ATLAS.root_0
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 12:02 start_atlas.sh
[2025-11-29 23:23:27] -rw-r--r-- 2 boincer umatlas    590111 Nov 29 12:02 input.tar.gz
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas 930681706 Nov 29 23:22 HITS.pool.root.1
[2025-11-29 23:23:27] -rw------- 1 boincer umatlas   7587840 Nov 29 23:23 result.tar.gz
23:23:28 (13932): run_atlas exited; CPU time 314357.671327
23:23:28 (13932): called boinc_finish(0)

</stderr_txt>
]]>

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