Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
14:52:35 (2850893): wrapper (7.7.26015): starting
14:52:35 (2850893): wrapper: running run_atlas (--nthreads 3)
[2025-12-02 14:52:35] Arguments: --nthreads 3
[2025-12-02 14:52:35] Threads: 3
[2025-12-02 14:52:35] Checking for CVMFS
[2025-12-02 14:52:35] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 14:52:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 14:52:35] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 14:52:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 14:52:35] 2.9.2.0 237354 19787 101356 153550 3 81 22447633 36864001 0 130560 1 7287722 99.955 875785 822 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 14:52:35] CVMFS is ok
[2025-12-02 14:52:35] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 14:52:35] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 14:52:35] Further information can be found at the LHC@home message board.
[2025-12-02 14:52:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 14:52:35] Checking for apptainer binary...
[2025-12-02 14:52:35] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 14:52:35] Running /usr/bin/apptainer --version
[2025-12-02 14:52:35] apptainer version 1.4.1-1.1
[2025-12-02 14:52:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 14:52:35] cosA127b
[2025-12-02 14:52:35] apptainer works
[2025-12-02 14:52:35] Set ATHENA_PROC_NUMBER=3
[2025-12-02 14:52:35] Set ATHENA_CORE_NUMBER=3
[2025-12-02 14:52:35] Starting ATLAS job with PandaID=6899424969
[2025-12-02 14:52:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 22:55:18]  *** The last 200 lines of the pilot log: ***
[2025-12-02 22:55:18] 2025-12-02 21:54:37,940 | INFO     | number of running child processes to parent process 2861052: 1
[2025-12-02 22:55:18] 2025-12-02 21:54:37,940 | INFO     | maximum number of monitored processes: 9
[2025-12-02 22:55:18] 2025-12-02 21:54:38,103 | INFO     | time since job start (28917s) is within the limit (172800.0s)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,853 | INFO     | CPU arch script returned: x86-64-v3
[2025-12-02 22:55:18] 2025-12-02 21:54:39,854 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3445.5379166666667
[2025-12-02 22:55:18] 2025-12-02 21:54:39,855 | INFO     | using path: /local/data/boinc/slots/0/PanDA_Pilot-6899424969/memory_monitor_summary.json (trf name=prmon)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,856 | INFO     | extracted standard info from prmon json
[2025-12-02 22:55:18] 2025-12-02 21:54:39,856 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 22:55:18] 2025-12-02 21:54:39,856 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 22:55:18] 2025-12-02 21:54:39,858 | INFO     | fitting pss+swap vs Time
[2025-12-02 22:55:18] 2025-12-02 21:54:39,858 | INFO     | sum of square deviations: 33022619162.5
[2025-12-02 22:55:18] 2025-12-02 21:54:39,860 | INFO     | sum of deviations: 194063298062.00003
[2025-12-02 22:55:18] 2025-12-02 21:54:39,860 | INFO     | mean x: 1764698006.5
[2025-12-02 22:55:18] 2025-12-02 21:54:39,860 | INFO     | mean y: 2216308.371308017
[2025-12-02 22:55:18] 2025-12-02 21:54:39,860 | INFO     | intersect: -10368345564.374475
[2025-12-02 22:55:18] 2025-12-02 21:54:39,860 | INFO     | chi2: 3.2755383214803326
[2025-12-02 22:55:18] 2025-12-02 21:54:39,861 | INFO     | sum of square deviations: 31988581170.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | sum of deviations: 241260242584.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | mean x: 1764697854.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | mean y: 2223232.537313433
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | intersect: -13307258362.813614
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | chi2: 2.393247610409986
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | current chi2=2.393247610409986 (change=26.93574687508489 %)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,863 | INFO     | sum of square deviations: 30976357540.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | sum of deviations: 238130836627.00003
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | mean x: 1764697701.5
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | mean y: 2222761.0344827585
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | intersect: -13563895834.713717
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | chi2: 2.3916093837059043
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | current chi2=2.3916093837059043 (change=0.06845203550838988 %)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,865 | INFO     | right removable region: 463
[2025-12-02 22:55:18] 2025-12-02 21:54:39,866 | INFO     | sum of square deviations: 31988581170.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,867 | INFO     | sum of deviations: 94808271316.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,867 | INFO     | mean x: 1764698159.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,867 | INFO     | mean y: 2230924.579957356
[2025-12-02 22:55:18] 2025-12-02 21:54:39,867 | INFO     | intersect: -5228009859.16024
[2025-12-02 22:55:18] 2025-12-02 21:54:39,868 | INFO     | chi2: 1.188867965749611
[2025-12-02 22:55:18] 2025-12-02 21:54:39,868 | INFO     | current chi2=1.188867965749611 (change=63.70465404256607 %)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,868 | INFO     | sum of square deviations: 30976357540.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | sum of deviations: 68229416586.00001
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | mean x: 1764698311.5
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | mean y: 2234911.5560344825
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | intersect: -3884740375.5953126
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | chi2: 0.9525600178450866
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | current chi2=0.9525600178450866 (change=19.876719258351486 %)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | left removable region: 20
[2025-12-02 22:55:18] 2025-12-02 21:54:39,870 | INFO     | sum of square deviations: 26957982662.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | sum of deviations: 96142150141.99998
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | mean x: 1764698281.0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | mean y: 2244763.020316027
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | intersect: -6291322868.299027
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | chi2: 0.05192645627068243
[2025-12-02 22:55:18] 2025-12-02 21:54:39,872 | INFO     | current memory leak: 3.57 B/s (using 443 data points, chi2=0.05)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | could have reported an average CPU frequency of 3891 MHz (19 samples)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | ..............................
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . Timing measurements:
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . get job = 0 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . initial setup = 1 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . payload setup = 2 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . stage-in = 0 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . payload execution = 28894 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . stage-out = 1 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | . log creation = 0 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,873 | INFO     | ..............................
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | 
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | job summary report
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | --------------------------------------------------
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | PanDA job id: 6899424969
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | task id: 47556173
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | errors: (none)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | pilot state: finished 
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | transexitcode: 0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | exeerrorcode: 0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | exeerrordiag: 
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | exitcode: 0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | exitmsg: OK
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | cpuconsumptiontime: 85332 s
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | nevents: 1000
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | neventsw: 0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | pid: 2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | pgrp: 2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | corecount: 3
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | event service: False
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | sizes: {0: 2284092, 1: 2284347, 3: 2284609, 11: 2284637, 28901: 2323576, 28903: 2332760, 28906: 2332950}
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | --------------------------------------------------
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | 
[2025-12-02 22:55:18] 2025-12-02 21:54:39,902 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,913 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | job 6899424969 has completed (purged errors)
[2025-12-02 22:55:18] 2025-12-02 21:54:39,914 | INFO     | overall cleanup function is called
[2025-12-02 22:55:18] 2025-12-02 21:54:40,922 | INFO     | --- collectZombieJob: --- 10, [2861052]
[2025-12-02 22:55:18] 2025-12-02 21:54:40,922 | INFO     | zombie collector waiting for pid 2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:40,922 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 22:55:18] 2025-12-02 21:54:40,923 | INFO     | collected zombie processes
[2025-12-02 22:55:18] 2025-12-02 21:54:40,923 | INFO     | will attempt to kill all subprocesses of pid=2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:40,964 | INFO     | process IDs to be killed: [2861052] (in reverse order)
[2025-12-02 22:55:18] 2025-12-02 21:54:40,987 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 22:55:18] 2025-12-02 21:54:40,987 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 22:55:18] 2025-12-02 21:54:40,988 | INFO     | did not find any defunct processes belonging to 2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:40,989 | INFO     | did not find any defunct processes belonging to 2861052
[2025-12-02 22:55:18] 2025-12-02 21:54:40,990 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 22:55:18] 2025-12-02 21:54:40,990 | INFO     | ready for new job
[2025-12-02 22:55:18] 2025-12-02 21:54:40,990 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 22:55:18] 2025-12-02 21:54:40,991 | INFO     | ***************************************
[2025-12-02 22:55:18] 2025-12-02 21:54:40,991 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 22:55:18] 2025-12-02 21:54:40,991 | INFO     | ***************************************
[2025-12-02 22:55:18] 2025-12-02 21:54:40,991 | INFO     | 
[2025-12-02 22:55:18] 2025-12-02 21:54:40,992 | INFO     | architecture information:
[2025-12-02 22:55:18] 2025-12-02 21:54:40,992 | INFO     | executing command: cat /etc/os-release
[2025-12-02 22:55:18] 2025-12-02 21:54:41,000 | INFO     | cat /etc/os-release:
[2025-12-02 22:55:18] NAME="CentOS Linux"
[2025-12-02 22:55:18] VERSION="7 (Core)"
[2025-12-02 22:55:18] ID="centos"
[2025-12-02 22:55:18] ID_LIKE="rhel fedora"
[2025-12-02 22:55:18] VERSION_ID="7"
[2025-12-02 22:55:18] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 22:55:18] ANSI_COLOR="0;31"
[2025-12-02 22:55:18] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 22:55:18] HOME_URL="https://www.centos.org/"
[2025-12-02 22:55:18] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 22:55:18] 
[2025-12-02 22:55:18] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 22:55:18] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 22:55:18] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 22:55:18] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 22:55:18] 
[2025-12-02 22:55:18] 2025-12-02 21:54:41,000 | INFO     | ***************************************
[2025-12-02 22:55:18] 2025-12-02 21:54:41,503 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | INFO     | sufficient remaining disk space (334674001920 B)
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | INFO     | update_server=False
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 22:55:18] 2025-12-02 21:54:41,516 | INFO     | aborting loop
[2025-12-02 22:55:18] 2025-12-02 21:54:42,047 | INFO     | all data control threads have been joined
[2025-12-02 22:55:18] 2025-12-02 21:54:42,105 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 22:55:18] 2025-12-02 21:54:42,405 | INFO     | all payload control threads have been joined
[2025-12-02 22:55:18] 2025-12-02 21:54:42,416 | INFO     | all job control threads have been joined
[2025-12-02 22:55:18] 2025-12-02 21:54:42,522 | INFO     | [job] retrieve thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:42,522 | INFO     | [job] queue monitor thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:42,522 | INFO     | [job] job monitor thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:42,630 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 22:55:18] 2025-12-02 21:54:42,657 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:42,969 | INFO     | [payload] failed_post thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,053 | INFO     | [data] control thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,166 | INFO     | [data] copytool_in thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,411 | INFO     | [payload] control thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,421 | INFO     | [job] control thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,490 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,723 | INFO     | [job] validate thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:43,723 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:44,025 | INFO     | [payload] validate_post thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:44,111 | INFO     | [data] copytool_out thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:46,637 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:54:51,980 | INFO     | job.realtimelogging is not enabled
[2025-12-02 22:55:18] 2025-12-02 21:54:52,986 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 22:55:18] 2025-12-02 21:55:11,213 | INFO     | PID=2854611 has CPU usage=1.0% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 22:55:18] 2025-12-02 21:55:11,214 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 22:55:18] 2025-12-02 21:55:11,214 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 22:55:18] 2025-12-02 21:55:11,214 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 22:55:18] 2025-12-02 21:55:13,383 | INFO     | [monitor] cgroup control has ended
[2025-12-02 22:55:18] 2025-12-02 21:55:13,466 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140147740038976)>', '<ExcThread(monitor, started 140147257501440)>']
[2025-12-02 22:55:18] 2025-12-02 21:55:14,228 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 22:55:18] 2025-12-02 21:55:14,229 | INFO     | [monitor] control thread has ended
[2025-12-02 22:55:18] 2025-12-02 21:55:18,491 | INFO     | all workflow threads have been joined
[2025-12-02 22:55:18] 2025-12-02 21:55:18,492 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 22:55:18] 2025-12-02 21:55:18,492 | INFO     | traces error code: 0
[2025-12-02 22:55:18] 2025-12-02 21:55:18,492 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 22:55:18] 2025-12-02 21:55:18,542 [wrapper] ==== pilot stdout END ====
[2025-12-02 22:55:18] 2025-12-02 21:55:18,545 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 22:55:18] 2025-12-02 21:55:18,547 [wrapper] pilotpid: 2854611
[2025-12-02 22:55:18] 2025-12-02 21:55:18,549 [wrapper] Pilot exit status: 0
[2025-12-02 22:55:18] 2025-12-02 21:55:18,556 [wrapper] pandaids: 6899424969
[2025-12-02 22:55:18] 2025-12-02 21:55:18,572 [wrapper] cleanup supervisor_pilot 2910924 2854612
[2025-12-02 22:55:18] 2025-12-02 21:55:18,574 [wrapper] Test setup, not cleaning
[2025-12-02 22:55:18] 2025-12-02 21:55:18,576 [wrapper] apfmon messages muted
[2025-12-02 22:55:18] 2025-12-02 21:55:18,579 [wrapper] ==== wrapper stdout END ====
[2025-12-02 22:55:18] 2025-12-02 21:55:18,581 [wrapper] ==== wrapper stderr END ====
[2025-12-02 22:55:18]  *** Error codes and diagnostics ***
[2025-12-02 22:55:18]     "exeErrorCode": 0,
[2025-12-02 22:55:18]     "exeErrorDiag": "",
[2025-12-02 22:55:18]     "pilotErrorCode": 0,
[2025-12-02 22:55:18]     "pilotErrorDiag": "",
[2025-12-02 22:55:18]  *** Listing of results directory ***
[2025-12-02 22:55:18] total 1313872
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-02 22:55:18] -rwx------ 1 boinc boinc     36292 Nov 27 02:26 runpilot2-wrapper.sh
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:27 queuedata.json
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc       100 Dec  2 14:52 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 22:55:18] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 14:52 run_atlas
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc       105 Dec  2 14:52 job.xml
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc 411755328 Dec  2 14:52 EVNT.47483658._003295.pool.root.1
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc    590113 Dec  2 14:52 input.tar.gz
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc     15847 Dec  2 14:52 start_atlas.sh
[2025-12-02 22:55:18] drwxrwx--x 2 boinc boinc      4096 Dec  2 14:52 shared
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc         0 Dec  2 14:52 boinc_setup_complete
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc      6442 Dec  2 14:52 init_data.xml
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc         0 Dec  2 14:52 boinc_lockfile
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc      2787 Dec  2 14:52 pandaJob.out
[2025-12-02 22:55:18] -rw------- 1 boinc boinc    986791 Dec  2 14:52 agis_schedconf.cvmfs.json
[2025-12-02 22:55:18] drwx------ 5 boinc boinc      4096 Dec  2 14:52 pilot3
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc       531 Dec  2 22:50 boinc_task_state.xml
[2025-12-02 22:55:18] -rw------- 1 boinc boinc 919273461 Dec  2 22:54 HITS.47556173._002518.pool.root.1
[2025-12-02 22:55:18] -rw------- 1 boinc boinc      1026 Dec  2 22:54 memory_monitor_summary.json
[2025-12-02 22:55:18] -rw------- 1 boinc boinc   1516240 Dec  2 22:54 agis_ddmendpoints.agis.ALL.json
[2025-12-02 22:55:18] -rw------- 1 boinc boinc   1161806 Dec  2 22:54 log.47556173._002518.job.log.tgz.1
[2025-12-02 22:55:18] -rw------- 1 boinc boinc      8568 Dec  2 22:54 heartbeat.json
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc      8192 Dec  2 22:54 boinc_mmap_file
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc        28 Dec  2 22:54 wrapper_checkpoint.txt
[2025-12-02 22:55:18] -rw------- 1 boinc boinc        95 Dec  2 22:55 pilot_heartbeat.json
[2025-12-02 22:55:18] -rw------- 1 boinc boinc      4824 Dec  2 22:55 pilotlog.txt
[2025-12-02 22:55:18] -rw------- 1 boinc boinc   4070662 Dec  2 22:55 log.47556173._002518.job.log.1
[2025-12-02 22:55:18] -rw------- 1 boinc boinc       353 Dec  2 22:55 output.list
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc       620 Dec  2 22:55 runtime_log
[2025-12-02 22:55:18] -rw------- 1 boinc boinc   5253120 Dec  2 22:55 result.tar.gz
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc      8908 Dec  2 22:55 runtime_log.err
[2025-12-02 22:55:18] -rw------- 1 boinc boinc       667 Dec  2 22:55 30EMDmlxfi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmrYNKDmZp4AYn.diag
[2025-12-02 22:55:18] -rw-r--r-- 1 boinc boinc     21196 Dec  2 22:55 stderr.txt
[2025-12-02 22:55:18] HITS file was successfully produced:
[2025-12-02 22:55:18] -rw------- 1 boinc boinc 919273461 Dec  2 22:54 shared/HITS.pool.root.1
[2025-12-02 22:55:18]  *** Contents of shared directory: ***
[2025-12-02 22:55:18] total 1305572
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc 411755328 Dec  2 14:52 ATLAS.root_0
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc    590113 Dec  2 14:52 input.tar.gz
[2025-12-02 22:55:18] -rw-r--r-- 2 boinc boinc     15847 Dec  2 14:52 start_atlas.sh
[2025-12-02 22:55:18] -rw------- 1 boinc boinc 919273461 Dec  2 22:54 HITS.pool.root.1
[2025-12-02 22:55:18] -rw------- 1 boinc boinc   5253120 Dec  2 22:55 result.tar.gz
22:55:19 (2850893): run_atlas exited; CPU time 85351.313522
22:55:19 (2850893): called boinc_finish(0)

</stderr_txt>
]]>

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