Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
07:36:50 (4157692): wrapper (7.7.26015): starting
07:36:50 (4157692): wrapper: running run_atlas (--nthreads 3)
[2025-12-02 07:36:50] Arguments: --nthreads 3
[2025-12-02 07:36:50] Threads: 3
[2025-12-02 07:36:50] Checking for CVMFS
[2025-12-02 07:36:50] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 07:36:50] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 07:36:50] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 07:36:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 07:36:50] 2.9.2.0 1502042 20160 81260 153546 3 81 18543876 36864000 0 130560 0 7222362 99.914 994601 1777 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 07:36:50] CVMFS is ok
[2025-12-02 07:36:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 07:36:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 07:36:50] Further information can be found at the LHC@home message board.
[2025-12-02 07:36:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 07:36:50] Checking for apptainer binary...
[2025-12-02 07:36:50] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 07:36:50] Running /usr/bin/apptainer --version
[2025-12-02 07:36:50] apptainer version 1.4.1-1.1
[2025-12-02 07:36:50] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 07:36:50] atlasA223a
[2025-12-02 07:36:50] apptainer works
[2025-12-02 07:36:50] Set ATHENA_PROC_NUMBER=3
[2025-12-02 07:36:50] Set ATHENA_CORE_NUMBER=3
[2025-12-02 07:36:50] Starting ATLAS job with PandaID=6898989575
[2025-12-02 07:36:50] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 16:32:12]  *** The last 200 lines of the pilot log: ***
[2025-12-02 16:32:12] 2025-12-02 15:31:40,984 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:32:12] 2025-12-02 15:31:40,984 | INFO     | aborting loop
[2025-12-02 16:32:12] 2025-12-02 15:31:40,984 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 16:32:12] 2025-12-02 15:31:41,112 | INFO     | all job control threads have been joined
[2025-12-02 16:32:12] 2025-12-02 15:31:41,298 | INFO     | all data control threads have been joined
[2025-12-02 16:32:12] 2025-12-02 15:31:41,393 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 16:32:12] 2025-12-02 15:31:41,775 | INFO     | all payload control threads have been joined
[2025-12-02 16:32:12] 2025-12-02 15:31:41,990 | INFO     | [job] retrieve thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:41,991 | INFO     | [job] job monitor thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,099 | INFO     | [payload] validate_post thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,118 | INFO     | [job] control thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,304 | INFO     | [data] control thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,345 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,670 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,744 | INFO     | [payload] failed_post thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,768 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,780 | INFO     | [payload] control thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,857 | INFO     | [data] copytool_in thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:42,990 | INFO     | [data] copytool_out thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:43,087 | INFO     | [job] validate thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:43,345 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:43,894 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 16:32:12] 2025-12-02 15:31:44,900 | INFO     | [job] queue monitor thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:45,400 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 16:32:12] 2025-12-02 15:31:46,184 | INFO     | [monitor] cgroup control has ended
[2025-12-02 16:32:12] 2025-12-02 15:31:46,753 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140274247829312)>', '<ExcThread(monitor, started 140273581528832)>']
[2025-12-02 16:32:12] 2025-12-02 15:31:51,779 | INFO     | all workflow threads have been joined
[2025-12-02 16:32:12] 2025-12-02 15:31:51,780 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 16:32:12] 2025-12-02 15:31:51,780 | INFO     | traces error code: 0
[2025-12-02 16:32:12] 2025-12-02 15:31:51,781 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 16:32:12] 2025-12-02 15:32:10,982 | INFO     | 32082s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | INFO     | PID=4161421 has CPU usage=2.4% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 16:32:12] 2025-12-02 15:32:12,042 | INFO     | [monitor] control thread has ended
[2025-12-02 16:32:12] 2025-12-02 15:32:12,087 [wrapper] ==== pilot stdout END ====
[2025-12-02 16:32:12] 2025-12-02 15:32:12,090 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 16:32:12] 2025-12-02 15:32:12,093 [wrapper] pilotpid: 4161421
[2025-12-02 16:32:12] 2025-12-02 15:32:12,096 [wrapper] Pilot exit status: 0
[2025-12-02 16:32:12] 2025-12-02 15:32:12,105 [wrapper] pandaids: 6898989575
[2025-12-02 16:32:12] 2025-12-02 15:32:12,121 [wrapper] cleanup supervisor_pilot   29598 4161422
[2025-12-02 16:32:12] 2025-12-02 15:32:12,123 [wrapper] Test setup, not cleaning
[2025-12-02 16:32:12] 2025-12-02 15:32:12,126 [wrapper] apfmon messages muted
[2025-12-02 16:32:12] 2025-12-02 15:32:12,129 [wrapper] ==== wrapper stdout END ====
[2025-12-02 16:32:12] 2025-12-02 15:32:12,132 [wrapper] ==== wrapper stderr END ====
[2025-12-02 16:32:12]  *** Error codes and diagnostics ***
[2025-12-02 16:32:12]     "exeErrorCode": 0,
[2025-12-02 16:32:12]     "exeErrorDiag": "",
[2025-12-02 16:32:12]     "pilotErrorCode": 0,
[2025-12-02 16:32:12]     "pilotErrorDiag": "",
[2025-12-02 16:32:12]  *** Listing of results directory ***
[2025-12-02 16:32:12] total 1310720
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc    576529 Nov 27 02:09 pilot3.tar.gz
[2025-12-02 16:32:12] -rwx------ 1 boinc boinc     36292 Nov 27 02:28 runpilot2-wrapper.sh
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      5112 Nov 27 02:30 queuedata.json
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc       100 Dec  2 07:36 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 16:32:12] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 07:36 run_atlas
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc       105 Dec  2 07:36 job.xml
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc 407868921 Dec  2 07:36 EVNT.47483658._003245.pool.root.1
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc    590110 Dec  2 07:36 input.tar.gz
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc     15847 Dec  2 07:36 start_atlas.sh
[2025-12-02 16:32:12] drwxrwx--x 2 boinc boinc      4096 Dec  2 07:36 shared
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc         0 Dec  2 07:36 boinc_setup_complete
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      6199 Dec  2 07:36 init_data.xml
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc         0 Dec  2 07:36 boinc_lockfile
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      2788 Dec  2 07:36 pandaJob.out
[2025-12-02 16:32:12] -rw------- 1 boinc boinc    990257 Dec  2 07:36 agis_schedconf.cvmfs.json
[2025-12-02 16:32:12] drwx------ 5 boinc boinc      4096 Dec  2 07:37 pilot3
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc       531 Dec  2 16:28 boinc_task_state.xml
[2025-12-02 16:32:12] -rw------- 1 boinc boinc 918990278 Dec  2 16:31 HITS.47556173._002014.pool.root.1
[2025-12-02 16:32:12] -rw------- 1 boinc boinc      1026 Dec  2 16:31 memory_monitor_summary.json
[2025-12-02 16:32:12] -rw------- 1 boinc boinc   1516240 Dec  2 16:31 agis_ddmendpoints.agis.ALL.json
[2025-12-02 16:32:12] -rw------- 1 boinc boinc   1203898 Dec  2 16:31 log.47556173._002014.job.log.tgz.1
[2025-12-02 16:32:12] -rw------- 1 boinc boinc      8573 Dec  2 16:31 heartbeat.json
[2025-12-02 16:32:12] -rw------- 1 boinc boinc        95 Dec  2 16:31 pilot_heartbeat.json
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      8192 Dec  2 16:31 boinc_mmap_file
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc        28 Dec  2 16:31 wrapper_checkpoint.txt
[2025-12-02 16:32:12] -rw------- 1 boinc boinc       863 Dec  2 16:32 pilotlog.txt
[2025-12-02 16:32:12] -rw------- 1 boinc boinc   4509486 Dec  2 16:32 log.47556173._002014.job.log.1
[2025-12-02 16:32:12] -rw------- 1 boinc boinc       353 Dec  2 16:32 output.list
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc       620 Dec  2 16:32 runtime_log
[2025-12-02 16:32:12] -rw------- 1 boinc boinc   5734400 Dec  2 16:32 result.tar.gz
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      8918 Dec  2 16:32 runtime_log.err
[2025-12-02 16:32:12] -rw------- 1 boinc boinc       669 Dec  2 16:32 p2WLDmRzfi8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmlQKKDm4CGDBn.diag
[2025-12-02 16:32:12] -rw-r--r-- 1 boinc boinc      7338 Dec  2 16:32 stderr.txt
[2025-12-02 16:32:12] HITS file was successfully produced:
[2025-12-02 16:32:12] -rw------- 1 boinc boinc 918990278 Dec  2 16:31 shared/HITS.pool.root.1
[2025-12-02 16:32:12]  *** Contents of shared directory: ***
[2025-12-02 16:32:12] total 1301968
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc 407868921 Dec  2 07:36 ATLAS.root_0
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc    590110 Dec  2 07:36 input.tar.gz
[2025-12-02 16:32:12] -rw-r--r-- 2 boinc boinc     15847 Dec  2 07:36 start_atlas.sh
[2025-12-02 16:32:12] -rw------- 1 boinc boinc 918990278 Dec  2 16:31 HITS.pool.root.1
[2025-12-02 16:32:12] -rw------- 1 boinc boinc   5734400 Dec  2 16:32 result.tar.gz
16:32:13 (4157692): run_atlas exited; CPU time 94870.271417
16:32:13 (4157692): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN