Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
20:50:04 (2788035): wrapper (7.7.26015): starting
20:50:04 (2788035): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 20:50:04] Arguments: --nthreads 12
[2025-11-29 20:50:04] Threads: 12
[2025-11-29 20:50:04] Checking for CVMFS
[2025-11-29 20:50:04] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 20:50:04] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 20:50:04] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 20:50:04] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 20:50:04] 2.13.0.0 498242 15519 44080 153455 1 81 73407669 82903040 1302 130560 29 6822490 99.984 483943 220 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2025-11-29 20:50:04] CVMFS is ok
[2025-11-29 20:50:04] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 20:50:04] Small home clusters do not require a local http proxy but it is suggested if
[2025-11-29 20:50:04] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2025-11-29 20:50:04] Further information can be found at the LHC@home message board.
[2025-11-29 20:50:04] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 20:50:04] Checking for apptainer binary...
[2025-11-29 20:50:04] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 20:50:04] Running /usr/bin/apptainer --version
[2025-11-29 20:50:05] apptainer version 1.4.4
[2025-11-29 20:50:05] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 20:50:05] INFO: /etc/singularity/ exists; cleanup by system administrator is not complete (see https://apptainer.org/docs/admin/latest/singularity_migration.html) torr
[2025-11-29 20:50:05] apptainer works
[2025-11-29 20:50:05] Set ATHENA_PROC_NUMBER=12
[2025-11-29 20:50:05] Set ATHENA_CORE_NUMBER=12
[2025-11-29 20:50:05] Starting ATLAS job with PandaID=6897531732
[2025-11-29 20:50:05] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-30 00:19:34]  *** The last 200 lines of the pilot log: ***
[2025-11-30 00:19:34] 2025-11-30 00:18:36,215 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 00:19:34] 2025-11-30 00:18:36,292 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2025-11-30 00:19:34] 2025-11-30 00:18:36,741 | INFO     | time since job start (12508s) is within the limit (172800.0s)
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | job 6897531732 has state=finished
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | preparing for final server update for job 6897531732 in state='finished'
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | this job has now completed (state=finished)
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | log transfer has been attempted: DONE
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | job 6897531732 has finished - writing final server update
[2025-11-30 00:19:34] 2025-11-30 00:18:36,894 | INFO     | total number of processed events: 1000 (read)
[2025-11-30 00:19:34] 2025-11-30 00:18:36,895 | INFO     | executing command: lscpu
[2025-11-30 00:19:34] 2025-11-30 00:18:36,902 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2025-11-30 00:19:34] 2025-11-30 00:18:38,083 | INFO     | CPU arch script returned: x86-64-v3
[2025-11-30 00:19:34] 2025-11-30 00:18:38,084 | INFO     | found 6 cores (6 cores per socket, 1 socket) HT, CPU MHz: 3200.375583333334
[2025-11-30 00:19:34] 2025-11-30 00:18:38,084 | INFO     | using path: /var/lib/boinc-client/slots/0/PanDA_Pilot-6897531732/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,085 | INFO     | extracted standard info from prmon json
[2025-11-30 00:19:34] 2025-11-30 00:18:38,085 | INFO     | extracted standard memory fields from prmon json
[2025-11-30 00:19:34] 2025-11-30 00:18:38,085 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | fitting pss+swap vs Time
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | sum of square deviations: 2671348529.04391
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | sum of deviations: 413548079027.28296
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | mean x: 1764455646.4682927
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | mean y: 3780590.351219512
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | intersect: -273149361050.42303
[2025-11-30 00:19:34] 2025-11-30 00:18:38,086 | INFO     | chi2: 10.075627960676808
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | sum of square deviations: 2480626964.874986
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | sum of deviations: 406986290992.4749
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | mean x: 1764455493.975
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | mean y: 3774369.295
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | intersect: -289483201013.3056
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | chi2: 7.788365356759227
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | current chi2=7.788365356759227 (change=22.70094343344471 %)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | right removable region: 199
[2025-11-30 00:19:34] 2025-11-30 00:18:38,087 | INFO     | sum of square deviations: 2480605431.820003
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | sum of deviations: 357572868068.2201
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | mean x: 1764455798.97
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | mean y: 3824965.87
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | intersect: -254337922626.93558
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | chi2: 8.700399995621929
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | current chi2=8.700399995621929 (change=13.649054633836455 %)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | left removable region: 10
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | sum of square deviations: 2093403659.2169366
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | sum of deviations: 315376735670.84656
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | mean x: 1764455768.4867725
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | mean y: 3816262.3386243386
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | intersect: -265816059446.25125
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | chi2: 6.066323350008772
[2025-11-30 00:19:34] 2025-11-30 00:18:38,088 | INFO     | current memory leak: 150.65 B/s (using 189 data points, chi2=6.07)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | could have reported an average CPU frequency of 3456 MHz (10 samples)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | ..............................
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . Timing measurements:
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . get job = 0 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . initial setup = 1 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . payload setup = 1 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . stage-in = 0 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . payload execution = 12489 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . stage-out = 1 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | . log creation = 0 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,089 | INFO     | ..............................
[2025-11-30 00:19:34] 2025-11-30 00:18:38,113 | INFO     | 
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | job summary report
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | --------------------------------------------------
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | PanDA job id: 6897531732
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | task id: 47556161
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | errors: (none)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | pilot state: finished 
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | transexitcode: 0
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | exeerrorcode: 0
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | exeerrordiag: 
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | exitcode: 0
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | exitmsg: OK
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | cpuconsumptiontime: 123175 s
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | nevents: 1000
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | neventsw: 0
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | pid: 2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | pgrp: 2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | corecount: 12
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | event service: False
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | sizes: {0: 2283437, 1: 2284300, 2: 2284562, 11: 2284590, 12494: 2315714, 12496: 2324906, 12498: 2325096}
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | --------------------------------------------------
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | 
[2025-11-30 00:19:34] 2025-11-30 00:18:38,114 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/0
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | job 6897531732 has completed (purged errors)
[2025-11-30 00:19:34] 2025-11-30 00:18:38,120 | INFO     | overall cleanup function is called
[2025-11-30 00:19:34] 2025-11-30 00:18:39,129 | INFO     | --- collectZombieJob: --- 10, [2798236]
[2025-11-30 00:19:34] 2025-11-30 00:18:39,129 | INFO     | zombie collector waiting for pid 2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:39,129 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-30 00:19:34] 2025-11-30 00:18:39,129 | INFO     | collected zombie processes
[2025-11-30 00:19:34] 2025-11-30 00:18:39,129 | INFO     | will attempt to kill all subprocesses of pid=2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:39,156 | INFO     | process IDs to be killed: [2798236] (in reverse order)
[2025-11-30 00:19:34] 2025-11-30 00:18:39,171 | WARNING  | found no corresponding commands to process id(s)
[2025-11-30 00:19:34] 2025-11-30 00:18:39,172 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-30 00:19:34] 2025-11-30 00:18:39,173 | INFO     | did not find any defunct processes belonging to 2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:39,174 | INFO     | did not find any defunct processes belonging to 2798236
[2025-11-30 00:19:34] 2025-11-30 00:18:39,174 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-30 00:19:34] 2025-11-30 00:18:39,174 | INFO     | ready for new job
[2025-11-30 00:19:34] 2025-11-30 00:18:39,174 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | ***************************************
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | ***************************************
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | 
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | architecture information:
[2025-11-30 00:19:34] 2025-11-30 00:18:39,175 | INFO     | executing command: cat /etc/os-release
[2025-11-30 00:19:34] 2025-11-30 00:18:39,179 | INFO     | cat /etc/os-release:
[2025-11-30 00:19:34] NAME="CentOS Linux"
[2025-11-30 00:19:34] VERSION="7 (Core)"
[2025-11-30 00:19:34] ID="centos"
[2025-11-30 00:19:34] ID_LIKE="rhel fedora"
[2025-11-30 00:19:34] VERSION_ID="7"
[2025-11-30 00:19:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-30 00:19:34] ANSI_COLOR="0;31"
[2025-11-30 00:19:34] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-30 00:19:34] HOME_URL="https://www.centos.org/"
[2025-11-30 00:19:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-30 00:19:34] 
[2025-11-30 00:19:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-30 00:19:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-30 00:19:34] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-30 00:19:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-30 00:19:34] 
[2025-11-30 00:19:34] 2025-11-30 00:18:39,179 | INFO     | ***************************************
[2025-11-30 00:19:34] 2025-11-30 00:18:39,681 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/0
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | INFO     | sufficient remaining disk space (390262161408 B)
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | INFO     | current server update state: UPDATING_FINAL
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | INFO     | update_server=False
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-30 00:19:34] 2025-11-30 00:18:39,687 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-30 00:19:34] 2025-11-30 00:18:39,715 | INFO     | all payload control threads have been joined
[2025-11-30 00:19:34] 2025-11-30 00:18:40,118 | INFO     | all data control threads have been joined
[2025-11-30 00:19:34] 2025-11-30 00:18:40,692 | INFO     | [job] queue monitor thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:40,692 | INFO     | [job] retrieve thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:40,720 | INFO     | [payload] control thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:40,828 | WARNING  | process 2798236 can no longer be monitored (due to stat problems) - aborting
[2025-11-30 00:19:34] 2025-11-30 00:18:40,849 | INFO     | using path: /var/lib/boinc-client/slots/0/memory_monitor_summary.json (trf name=prmon)
[2025-11-30 00:19:34] 2025-11-30 00:18:40,873 | INFO     | number of running child processes to parent process 2798236: 1
[2025-11-30 00:19:34] 2025-11-30 00:18:40,873 | INFO     | maximum number of monitored processes: 17
[2025-11-30 00:19:34] 2025-11-30 00:18:40,873 | INFO     | aborting job monitoring since job object (job id=6897531732) has expired
[2025-11-30 00:19:34] 2025-11-30 00:18:40,873 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-30 00:19:34] 2025-11-30 00:18:40,873 | INFO     | will abort loop
[2025-11-30 00:19:34] 2025-11-30 00:18:40,903 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:40,947 | INFO     | [data] copytool_in thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,008 | INFO     | [job] validate thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,101 | INFO     | [job] create_data_payload thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,122 | INFO     | [payload] validate_pre thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,123 | INFO     | [data] control thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,124 | INFO     | all job control threads have been joined
[2025-11-30 00:19:34] 2025-11-30 00:18:41,693 | INFO     | [data] copytool_out thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,719 | INFO     | [payload] execute_payloads thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,812 | INFO     | [payload] failed_post thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:41,878 | INFO     | [job] job monitor thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:42,129 | INFO     | [job] control thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:42,293 | INFO     | [payload] validate_post thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:18:42,323 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-30 00:19:34] 2025-11-30 00:18:46,329 | INFO     | [data] queue_monitor thread has finished
[2025-11-30 00:19:34] 2025-11-30 00:19:09,831 | INFO     | PID=2791774 has CPU usage=2.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-11-30 00:19:34] 2025-11-30 00:19:09,832 | INFO     | found 0 job(s) in 20 queues
[2025-11-30 00:19:34] 2025-11-30 00:19:09,832 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-30 00:19:34] 2025-11-30 00:19:09,832 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-30 00:19:34] 2025-11-30 00:19:29,161 | INFO     | [monitor] cgroup control has ended
[2025-11-30 00:19:34] 2025-11-30 00:19:29,311 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 129429855414080)>', '<ExcThread(monitor, started 129428822677248)>']
[2025-11-30 00:19:34] 2025-11-30 00:19:29,918 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-30 00:19:34] 2025-11-30 00:19:29,918 | INFO     | [monitor] control thread has ended
[2025-11-30 00:19:34] 2025-11-30 00:19:34,336 | INFO     | all workflow threads have been joined
[2025-11-30 00:19:34] 2025-11-30 00:19:34,337 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-30 00:19:34] 2025-11-30 00:19:34,345 | INFO     | traces error code: 0
[2025-11-30 00:19:34] 2025-11-30 00:19:34,345 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-30 00:19:34] 2025-11-30 00:19:34,400 [wrapper] ==== pilot stdout END ====
[2025-11-30 00:19:34] 2025-11-30 00:19:34,401 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-30 00:19:34] 2025-11-30 00:19:34,401 [wrapper] pilotpid: 2791774
[2025-11-30 00:19:34] 2025-11-30 00:19:34,402 [wrapper] Pilot exit status: 0
[2025-11-30 00:19:34] 2025-11-30 00:19:34,406 [wrapper] pandaids: 6897531732
[2025-11-30 00:19:34] 2025-11-30 00:19:34,415 [wrapper] cleanup supervisor_pilot 2883259 2791775
[2025-11-30 00:19:34] 2025-11-30 00:19:34,416 [wrapper] Test setup, not cleaning
[2025-11-30 00:19:34] 2025-11-30 00:19:34,417 [wrapper] apfmon messages muted
[2025-11-30 00:19:34] 2025-11-30 00:19:34,418 [wrapper] ==== wrapper stdout END ====
[2025-11-30 00:19:34] 2025-11-30 00:19:34,419 [wrapper] ==== wrapper stderr END ====
[2025-11-30 00:19:34]  *** Error codes and diagnostics ***
[2025-11-30 00:19:34]     "exeErrorCode": 0,
[2025-11-30 00:19:34]     "exeErrorDiag": "",
[2025-11-30 00:19:34]     "pilotErrorCode": 0,
[2025-11-30 00:19:34]     "pilotErrorDiag": "",
[2025-11-30 00:19:34]  *** Listing of results directory ***
[2025-11-30 00:19:34] total 1303460
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc    576529 Nov 25 16:48 pilot3.tar.gz
[2025-11-30 00:19:34] -rwx------ 1 boinc boinc     36292 Nov 25 17:01 runpilot2-wrapper.sh
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc      5112 Nov 25 17:02 queuedata.json
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc       100 Nov 29 20:50 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-30 00:19:34] -rwxr-xr-x 1 boinc boinc      7986 Nov 29 20:50 run_atlas
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc       105 Nov 29 20:50 job.xml
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc     15847 Nov 29 20:50 start_atlas.sh
[2025-11-30 00:19:34] drwxrwx--x 2 boinc boinc      4096 Nov 29 20:50 shared
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc    590110 Nov 29 20:50 input.tar.gz
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc      9907 Nov 29 20:50 init_data.xml
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc 408192719 Nov 29 20:50 EVNT.47483658._002309.pool.root.1
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc         0 Nov 29 20:50 boinc_lockfile
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc      2786 Nov 29 20:50 pandaJob.out
[2025-11-30 00:19:34] -rw------- 1 boinc boinc    991826 Nov 29 20:50 agis_schedconf.cvmfs.json
[2025-11-30 00:19:34] drwx------ 5 boinc boinc      4096 Nov 29 20:50 pilot3
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc       532 Nov 30 00:15 boinc_task_state.xml
[2025-11-30 00:19:34] -rw------- 1 boinc boinc 915137028 Nov 30 00:18 HITS.47556161._002927.pool.root.1
[2025-11-30 00:19:34] -rw------- 1 boinc boinc      1071 Nov 30 00:18 memory_monitor_summary.json
[2025-11-30 00:19:34] -rw------- 1 boinc boinc   1516240 Nov 30 00:18 agis_ddmendpoints.agis.ALL.json
[2025-11-30 00:19:34] -rw------- 1 boinc boinc   1948447 Nov 30 00:18 log.47556161._002927.job.log.tgz.1
[2025-11-30 00:19:34] -rw------- 1 boinc boinc      8626 Nov 30 00:18 heartbeat.json
[2025-11-30 00:19:34] -rw------- 1 boinc boinc        95 Nov 30 00:19 pilot_heartbeat.json
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc        29 Nov 30 00:19 wrapper_checkpoint.txt
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc      8192 Nov 30 00:19 boinc_mmap_file
[2025-11-30 00:19:34] -rw------- 1 boinc boinc      5285 Nov 30 00:19 pilotlog.txt
[2025-11-30 00:19:34] -rw------- 1 boinc boinc   1795155 Nov 30 00:19 log.47556161._002927.job.log.1
[2025-11-30 00:19:34] -rw------- 1 boinc boinc       353 Nov 30 00:19 output.list
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc       620 Nov 30 00:19 runtime_log
[2025-11-30 00:19:34] -rw------- 1 boinc boinc   3768320 Nov 30 00:19 result.tar.gz
[2025-11-30 00:19:34] -rw------- 1 boinc boinc       661 Nov 30 00:19 zrkLDmKbBi8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmIcMKDmpRwLHo.diag
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc      9048 Nov 30 00:19 runtime_log.err
[2025-11-30 00:19:34] -rw-r--r-- 1 boinc boinc     22152 Nov 30 00:19 stderr.txt
[2025-11-30 00:19:34] HITS file was successfully produced:
[2025-11-30 00:19:34] -rw------- 1 boinc boinc 915137028 Nov 30 00:18 shared/HITS.pool.root.1
[2025-11-30 00:19:34]  *** Contents of shared directory: ***
[2025-11-30 00:19:34] total 1296600
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc     15847 Nov 29 20:50 start_atlas.sh
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc    590110 Nov 29 20:50 input.tar.gz
[2025-11-30 00:19:34] -rw-r--r-- 2 boinc boinc 408192719 Nov 29 20:50 ATLAS.root_0
[2025-11-30 00:19:34] -rw------- 1 boinc boinc 915137028 Nov 30 00:18 HITS.pool.root.1
[2025-11-30 00:19:34] -rw------- 1 boinc boinc   3768320 Nov 30 00:19 result.tar.gz
00:19:35 (2788035): run_atlas exited; CPU time 122603.371785
00:19:35 (2788035): called boinc_finish(0)

</stderr_txt>
]]>

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