Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
08:59:00 (27556): wrapper (7.7.26015): starting
08:59:00 (27556): wrapper: running run_atlas (--nthreads 8)
[2025-12-01 08:59:00] Arguments: --nthreads 8
[2025-12-01 08:59:00] Threads: 8
[2025-12-01 08:59:00] Checking for CVMFS
[2025-12-01 08:59:01] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-01 08:59:02] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-01 08:59:02] Running cvmfs_config stat atlas.cern.ch
[2025-12-01 08:59:03] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-01 08:59:03] 2.11.2.0 29171 292280 141172 153510 2 85 22046615 25165825 2504 130560 10 148216000 99.877 84307299 3485 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.73.11:3128/ 1
[2025-12-01 08:59:03] CVMFS is ok
[2025-12-01 08:59:03] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-01 08:59:03] Checking for apptainer binary...
[2025-12-01 08:59:03] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-01 08:59:03] Running /usr/bin/apptainer --version
[2025-12-01 08:59:03] apptainer version 1.3.2-1.el7
[2025-12-01 08:59:03] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-01 08:59:19] cg-vwn473.simple-grid.lan
[2025-12-01 08:59:19] apptainer works
[2025-12-01 08:59:19] Set ATHENA_PROC_NUMBER=8
[2025-12-01 08:59:19] Set ATHENA_CORE_NUMBER=8
[2025-12-01 08:59:19] Starting ATLAS job with PandaID=6894252887
[2025-12-01 08:59:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-01 17:28:06]  *** The last 200 lines of the pilot log: ***
[2025-12-01 17:28:06] 2025-12-01 16:27:27,266 | INFO     | using path: /var/lib/boinc/slots/18/PanDA_Pilot-6894252887/memory_monitor_summary.json (trf name=prmon)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,267 | INFO     | extracted standard info from prmon json
[2025-12-01 17:28:06] 2025-12-01 16:27:27,267 | INFO     | extracted standard memory fields from prmon json
[2025-12-01 17:28:06] 2025-12-01 16:27:27,267 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-01 17:28:06] 2025-12-01 16:27:27,267 | WARNING  | format EVNTtoHITS has no such key: dbData
[2025-12-01 17:28:06] 2025-12-01 16:27:27,267 | WARNING  | format EVNTtoHITS has no such key: dbTime
[2025-12-01 17:28:06] 2025-12-01 16:27:27,275 | INFO     | fitting pss+swap vs Time
[2025-12-01 17:28:06] 2025-12-01 16:27:27,276 | INFO     | sum of square deviations: 35814878028.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,302 | INFO     | sum of deviations: 132748742594.99998
[2025-12-01 17:28:06] 2025-12-01 16:27:27,302 | INFO     | mean x: 1764591514.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,302 | INFO     | mean y: 2527327.3737166324
[2025-12-01 17:28:06] 2025-12-01 16:27:27,302 | INFO     | intersect: -6537975323.345162
[2025-12-01 17:28:06] 2025-12-01 16:27:27,303 | INFO     | chi2: 5.756332574788958
[2025-12-01 17:28:06] 2025-12-01 16:27:27,304 | INFO     | sum of square deviations: 34723034300.5
[2025-12-01 17:28:06] 2025-12-01 16:27:27,310 | INFO     | sum of deviations: 197375844075.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,310 | INFO     | mean x: 1764591361.5
[2025-12-01 17:28:06] 2025-12-01 16:27:27,310 | INFO     | mean y: 2536296.419087137
[2025-12-01 17:28:06] 2025-12-01 16:27:27,310 | INFO     | intersect: -10027915144.240313
[2025-12-01 17:28:06] 2025-12-01 16:27:27,311 | INFO     | chi2: 4.23070892583893
[2025-12-01 17:28:06] 2025-12-01 16:27:27,311 | INFO     | current chi2=4.23070892583893 (change=26.50339654855612 %)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,311 | INFO     | sum of square deviations: 33653609598.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,318 | INFO     | sum of deviations: 195163114398.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,318 | INFO     | mean x: 1764591209.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,318 | INFO     | mean y: 2535981.0566037735
[2025-12-01 17:28:06] 2025-12-01 16:27:27,318 | INFO     | intersect: -10230634252.434143
[2025-12-01 17:28:06] 2025-12-01 16:27:27,319 | INFO     | chi2: 4.2319539392088705
[2025-12-01 17:28:06] 2025-12-01 16:27:27,319 | INFO     | current chi2=4.2319539392088705 (change=-0.02942800820772066 %)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,319 | INFO     | right removable region: 476
[2025-12-01 17:28:06] 2025-12-01 16:27:27,320 | INFO     | sum of square deviations: 34723034300.5
[2025-12-01 17:28:06] 2025-12-01 16:27:27,327 | INFO     | sum of deviations: -29258069737.499996
[2025-12-01 17:28:06] 2025-12-01 16:27:27,327 | INFO     | mean x: 1764591666.5
[2025-12-01 17:28:06] 2025-12-01 16:27:27,327 | INFO     | mean y: 2549933.765560166
[2025-12-01 17:28:06] 2025-12-01 16:27:27,327 | INFO     | intersect: 1489417284.9844859
[2025-12-01 17:28:06] 2025-12-01 16:27:27,328 | INFO     | chi2: 1.8227821221498028
[2025-12-01 17:28:06] 2025-12-01 16:27:27,328 | INFO     | current chi2=1.8227821221498028 (change=68.33431532199769 %)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,329 | INFO     | sum of square deviations: 33653609598.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,335 | INFO     | sum of deviations: -66147495919.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,336 | INFO     | mean x: 1764591819.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,336 | INFO     | mean y: 2555187.628930818
[2025-12-01 17:28:06] 2025-12-01 16:27:27,336 | INFO     | intersect: 3470929948.621584
[2025-12-01 17:28:06] 2025-12-01 16:27:27,337 | INFO     | chi2: 1.612916412308258
[2025-12-01 17:28:06] 2025-12-01 16:27:27,337 | INFO     | current chi2=1.612916412308258 (change=11.513483004432128 %)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,337 | INFO     | left removable region: 20
[2025-12-01 17:28:06] 2025-12-01 16:27:27,338 | INFO     | sum of square deviations: 29401593130.0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,344 | INFO     | sum of deviations: -11620662778.499996
[2025-12-01 17:28:06] 2025-12-01 16:27:27,344 | INFO     | mean x: 1764591788.5
[2025-12-01 17:28:06] 2025-12-01 16:27:27,344 | INFO     | mean y: 2566239.5460526315
[2025-12-01 17:28:06] 2025-12-01 16:27:27,344 | INFO     | intersect: 700002124.2344102
[2025-12-01 17:28:06] 2025-12-01 16:27:27,345 | INFO     | chi2: 0.01408906502867841
[2025-12-01 17:28:06] 2025-12-01 16:27:27,345 | INFO     | current memory leak: -0.40 B/s (using 456 data points, chi2=0.01)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | could have reported an average CPU frequency of 2249 MHz (19 samples)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | ..............................
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . Timing measurements:
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . get job = 0 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . initial setup = 8 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . payload setup = 139 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . stage-in = 0 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . payload execution = 29825 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,346 | INFO     | . stage-out = 6 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,347 | INFO     | . log creation = 1 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,347 | INFO     | ..............................
[2025-12-01 17:28:06] 2025-12-01 16:27:27,632 | INFO     | 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,632 | INFO     | job summary report
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | --------------------------------------------------
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | PanDA job id: 6894252887
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | task id: 47523626
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | errors: (none)
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | pilot state: finished 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | transexitcode: 0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | exeerrorcode: 0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | exeerrordiag: 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | exitcode: 0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | exitmsg: OK
[2025-12-01 17:28:06] 2025-12-01 16:27:27,633 | INFO     | cpuconsumptiontime: 115289 s
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | nevents: 400
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | neventsw: 0
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | pid: 5637
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | pgrp: 5637
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | corecount: 8
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | event service: False
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | sizes: {0: 2283723, 1: 2283978, 12: 2283978, 23: 2284006, 33: 2284034, 44: 2284090, 55: 2284246, 66: 2284274, 76: 2284302, 87: 2284358, 98: 2284956, 108: 2284956, 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | --------------------------------------------------
[2025-12-01 17:28:06] 2025-12-01 16:27:27,634 | INFO     | 
[2025-12-01 17:28:06] 2025-12-01 16:27:27,635 | INFO     | executing command: ls -lF /var/lib/boinc/slots/18
[2025-12-01 17:28:06] 2025-12-01 16:27:27,856 | INFO     | time since job start (30264s) is within the limit (172800.0s)
[2025-12-01 17:28:06] 2025-12-01 16:27:28,041 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,042 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | job 6894252887 has completed (purged errors)
[2025-12-01 17:28:06] 2025-12-01 16:27:28,043 | INFO     | overall cleanup function is called
[2025-12-01 17:28:06] 2025-12-01 16:27:29,052 | INFO     | --- collectZombieJob: --- 10, [5637]
[2025-12-01 17:28:06] 2025-12-01 16:27:29,052 | INFO     | zombie collector waiting for pid 5637
[2025-12-01 17:28:06] 2025-12-01 16:27:29,053 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-01 17:28:06] 2025-12-01 16:27:29,053 | INFO     | collected zombie processes
[2025-12-01 17:28:06] 2025-12-01 16:27:29,053 | INFO     | will attempt to kill all subprocesses of pid=5637
[2025-12-01 17:28:06] 2025-12-01 16:27:29,182 | INFO     | process IDs to be killed: [5637] (in reverse order)
[2025-12-01 17:28:06] 2025-12-01 16:27:30,062 | WARNING  | found no corresponding commands to process id(s)
[2025-12-01 17:28:06] 2025-12-01 16:27:30,062 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-01 17:28:06] 2025-12-01 16:27:30,065 | INFO     | did not find any defunct processes belonging to 5637
[2025-12-01 17:28:06] 2025-12-01 16:27:30,067 | INFO     | did not find any defunct processes belonging to 5637
[2025-12-01 17:28:06] 2025-12-01 16:27:30,135 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-01 17:28:06] 2025-12-01 16:27:30,136 | INFO     | ready for new job
[2025-12-01 17:28:06] 2025-12-01 16:27:30,136 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-01 17:28:06] 2025-12-01 16:27:30,138 | INFO     | ***************************************
[2025-12-01 17:28:06] 2025-12-01 16:27:30,139 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-01 17:28:06] 2025-12-01 16:27:30,139 | INFO     | ***************************************
[2025-12-01 17:28:06] 2025-12-01 16:27:30,139 | INFO     | 
[2025-12-01 17:28:06] 2025-12-01 16:27:30,139 | INFO     | pilot is running in a VM
[2025-12-01 17:28:06] 2025-12-01 16:27:30,140 | INFO     | architecture information:
[2025-12-01 17:28:06] 2025-12-01 16:27:30,146 | INFO     | executing command: cat /etc/os-release
[2025-12-01 17:28:06] 2025-12-01 16:27:30,442 | INFO     | cat /etc/os-release:
[2025-12-01 17:28:06] NAME="CentOS Linux"
[2025-12-01 17:28:06] VERSION="7 (Core)"
[2025-12-01 17:28:06] ID="centos"
[2025-12-01 17:28:06] ID_LIKE="rhel fedora"
[2025-12-01 17:28:06] VERSION_ID="7"
[2025-12-01 17:28:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-01 17:28:06] ANSI_COLOR="0;31"
[2025-12-01 17:28:06] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-01 17:28:06] HOME_URL="https://www.centos.org/"
[2025-12-01 17:28:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-01 17:28:06] 
[2025-12-01 17:28:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-01 17:28:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-01 17:28:06] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-01 17:28:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-01 17:28:06] 
[2025-12-01 17:28:06] 2025-12-01 16:27:30,442 | INFO     | ***************************************
[2025-12-01 17:28:06] 2025-12-01 16:27:30,945 | INFO     | executing command: df -mP /var/lib/boinc/slots/18
[2025-12-01 17:28:06] 2025-12-01 16:27:31,186 | INFO     | sufficient remaining disk space (489114566656 B)
[2025-12-01 17:28:06] 2025-12-01 16:27:31,186 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-01 17:28:06] 2025-12-01 16:27:31,186 | INFO     | current server update state: UPDATING_FINAL
[2025-12-01 17:28:06] 2025-12-01 16:27:31,187 | INFO     | update_server=False
[2025-12-01 17:28:06] 2025-12-01 16:27:31,187 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-01 17:28:06] 2025-12-01 16:27:31,188 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-01 17:28:06] 2025-12-01 16:27:31,189 | INFO     | aborting loop
[2025-12-01 17:28:06] 2025-12-01 16:27:31,206 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-01 17:28:06] 2025-12-01 16:27:31,457 | INFO     | all payload control threads have been joined
[2025-12-01 17:28:06] 2025-12-01 16:27:31,716 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-01 17:28:06] 2025-12-01 16:27:32,127 | INFO     | all data control threads have been joined
[2025-12-01 17:28:06] 2025-12-01 16:27:32,146 | INFO     | all job control threads have been joined
[2025-12-01 17:28:06] 2025-12-01 16:27:32,192 | INFO     | [job] retrieve thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,194 | INFO     | [job] job monitor thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,201 | INFO     | [job] create_data_payload thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,208 | INFO     | [payload] execute_payloads thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,463 | INFO     | [payload] control thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,469 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-01 17:28:06] 2025-12-01 16:27:32,607 | INFO     | [payload] validate_pre thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:32,929 | INFO     | [payload] validate_post thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,075 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,133 | INFO     | [data] control thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,152 | INFO     | [job] control thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,212 | INFO     | [data] copytool_out thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,401 | INFO     | [payload] failed_post thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,475 | INFO     | [job] queue monitor thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,482 | INFO     | [data] copytool_in thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:33,609 | INFO     | [job] validate thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:35,728 | INFO     | [data] queue_monitor thread has finished
[2025-12-01 17:28:06] 2025-12-01 16:27:55,314 | INFO     | [monitor] cgroup control has ended
[2025-12-01 17:28:06] 2025-12-01 16:27:56,970 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140715448923968)>', '<ExcThread(monitor, started 140714855880448)>']
[2025-12-01 17:28:06] 2025-12-01 16:27:59,889 | INFO     | 30275s have passed since pilot start - server update state is 'UPDATING_FINAL'
[2025-12-01 17:28:06] 2025-12-01 16:28:01,021 | INFO     | PID=31389 has CPU usage=1.1% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-12-01 17:28:06] 2025-12-01 16:28:01,021 | INFO     | .. there are 9 such processes running
[2025-12-01 17:28:06] 2025-12-01 16:28:01,021 | INFO     | found 0 job(s) in 20 queues
[2025-12-01 17:28:06] 2025-12-01 16:28:01,021 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-01 17:28:06] 2025-12-01 16:28:01,022 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-01 17:28:06] 2025-12-01 16:28:01,022 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-01 17:28:06] 2025-12-01 16:28:01,022 | INFO     | [monitor] control thread has ended
[2025-12-01 17:28:06] 2025-12-01 16:28:01,996 | INFO     | all workflow threads have been joined
[2025-12-01 17:28:06] 2025-12-01 16:28:01,996 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-01 17:28:06] 2025-12-01 16:28:01,997 | INFO     | traces error code: 0
[2025-12-01 17:28:06] 2025-12-01 16:28:01,997 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-01 17:28:06] 2025-12-01 16:28:02,276 [wrapper] ==== pilot stdout END ====
[2025-12-01 17:28:06] 2025-12-01 16:28:02,355 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-01 17:28:06] 2025-12-01 16:28:02,407 [wrapper] pilotpid: 31389
[2025-12-01 17:28:06] 2025-12-01 16:28:02,455 [wrapper] Pilot exit status: 0
[2025-12-01 17:28:06] 2025-12-01 16:28:02,853 [wrapper] pandaids: 6894252887
[2025-12-01 17:28:06] 2025-12-01 16:28:03,511 [wrapper] cleanup supervisor_pilot  7212 31390
[2025-12-01 17:28:06] 2025-12-01 16:28:03,570 [wrapper] Test setup, not cleaning
[2025-12-01 17:28:06] 2025-12-01 16:28:03,636 [wrapper] apfmon messages muted
[2025-12-01 17:28:06] 2025-12-01 16:28:03,736 [wrapper] ==== wrapper stdout END ====
[2025-12-01 17:28:06] 2025-12-01 16:28:03,838 [wrapper] ==== wrapper stderr END ====
[2025-12-01 17:28:06]  *** Error codes and diagnostics ***
[2025-12-01 17:28:06]     "exeErrorCode": 0,
[2025-12-01 17:28:06]     "exeErrorDiag": "",
[2025-12-01 17:28:06]     "pilotErrorCode": 0,
[2025-12-01 17:28:06]     "pilotErrorDiag": "",
[2025-12-01 17:28:06]  *** Listing of results directory ***
[2025-12-01 17:28:06] total 631784
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc    576529 Nov 27 17:16 pilot3.tar.gz
[2025-12-01 17:28:06] -rwx------. 1 boinc boinc     36292 Nov 27 17:19 runpilot2-wrapper.sh
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc      5112 Nov 27 17:22 queuedata.json
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc       100 Dec  1 08:59 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-01 17:28:06] -rwxr-xr-x. 1 boinc boinc      7986 Dec  1 08:59 run_atlas
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc       105 Dec  1 08:59 job.xml
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc      6393 Dec  1 08:59 init_data.xml
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc 307975201 Dec  1 08:59 EVNT.47523624._000005.pool.root.1
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc     15847 Dec  1 08:59 start_atlas.sh
[2025-12-01 17:28:06] drwxrwx--x. 2 boinc boinc        68 Dec  1 08:59 shared
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc    589953 Dec  1 08:59 input.tar.gz
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc         0 Dec  1 08:59 boinc_lockfile
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc      2610 Dec  1 08:59 pandaJob.out
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc    992521 Dec  1 09:02 agis_schedconf.cvmfs.json
[2025-12-01 17:28:06] drwx------. 5 boinc boinc      4096 Dec  1 09:03 pilot3
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc 325769313 Dec  1 17:24 HITS.47523626._000109.pool.root.1
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc       532 Dec  1 17:24 boinc_task_state.xml
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc      1021 Dec  1 17:25 memory_monitor_summary.json
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc   1516240 Dec  1 17:25 agis_ddmendpoints.agis.ALL.json
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc    662710 Dec  1 17:25 log.47523626._000109.job.log.tgz.1
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc        95 Dec  1 17:27 pilot_heartbeat.json
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc      7778 Dec  1 17:27 heartbeat.json
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc        29 Dec  1 17:27 wrapper_checkpoint.txt
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc      8192 Dec  1 17:27 boinc_mmap_file
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc      5001 Dec  1 17:28 pilotlog.txt
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc   3985699 Dec  1 17:28 log.47523626._000109.job.log.1
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc       357 Dec  1 17:28 output.list
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc       620 Dec  1 17:28 runtime_log
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc   4669440 Dec  1 17:28 result.tar.gz
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc      8833 Dec  1 17:28 runtime_log.err
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc       659 Dec  1 17:28 8QeLDmttti8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmD4NKDmDnbRLo.diag
[2025-12-01 17:28:06] -rw-r--r--. 1 boinc boinc     20921 Dec  1 17:28 stderr.txt
[2025-12-01 17:28:06] HITS file was successfully produced:
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc 325769313 Dec  1 17:24 shared/HITS.pool.root.1
[2025-12-01 17:28:06]  *** Contents of shared directory: ***
[2025-12-01 17:28:06] total 624052
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc 307975201 Dec  1 08:59 ATLAS.root_0
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc     15847 Dec  1 08:59 start_atlas.sh
[2025-12-01 17:28:06] -rw-r--r--. 2 boinc boinc    589953 Dec  1 08:59 input.tar.gz
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc 325769313 Dec  1 17:24 HITS.pool.root.1
[2025-12-01 17:28:06] -rw-------. 1 boinc boinc   4669440 Dec  1 17:28 result.tar.gz
17:28:07 (27556): run_atlas exited; CPU time 115664.194717
17:28:07 (27556): called boinc_finish(0)

</stderr_txt>
]]>

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