Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
08:24:18 (3498165): wrapper (7.7.26015): starting
08:24:18 (3498165): wrapper: running run_atlas (--nthreads 4)
[2025-12-03 08:24:18] Arguments: --nthreads 4
[2025-12-03 08:24:18] Threads: 4
[2025-12-03 08:24:18] Checking for CVMFS
[2025-12-03 08:24:19] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-03 08:24:19] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-03 08:24:19] Running cvmfs_config stat atlas.cern.ch
[2025-12-03 08:24:19] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-03 08:24:19] 2.9.2.0 64599 21619 104844 153585 0 81 35315594 36864001 0 130560 0 8503056 99.959 934774 1632 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-03 08:24:19] CVMFS is ok
[2025-12-03 08:24:19] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-03 08:24:19] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-03 08:24:19] Further information can be found at the LHC@home message board.
[2025-12-03 08:24:19] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-03 08:24:19] Checking for apptainer binary...
[2025-12-03 08:24:19] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-03 08:24:19] Running /usr/bin/apptainer --version
[2025-12-03 08:24:19] apptainer version 1.4.1-1.1
[2025-12-03 08:24:19] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-03 08:24:19] thA314
[2025-12-03 08:24:19] apptainer works
[2025-12-03 08:24:19] Set ATHENA_PROC_NUMBER=4
[2025-12-03 08:24:19] Set ATHENA_CORE_NUMBER=4
[2025-12-03 08:24:19] Starting ATLAS job with PandaID=6900296047
[2025-12-03 08:24:19] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-03 15:23:23]  *** The last 200 lines of the pilot log: ***
[2025-12-03 15:23:23] 2025-12-03 14:22:51,360 | INFO     | extracted standard info from prmon json
[2025-12-03 15:23:23] 2025-12-03 14:22:51,360 | INFO     | extracted standard memory fields from prmon json
[2025-12-03 15:23:23] 2025-12-03 14:22:51,360 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-03 15:23:23] 2025-12-03 14:22:51,363 | INFO     | fitting pss+swap vs Time
[2025-12-03 15:23:23] 2025-12-03 14:22:51,363 | INFO     | sum of square deviations: 21527882710.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,364 | INFO     | sum of deviations: 208567284898.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,364 | INFO     | mean x: 1764759196.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,364 | INFO     | mean y: 2363939.0437956206
[2025-12-03 15:23:23] 2025-12-03 14:22:51,364 | INFO     | intersect: -17095045916.200506
[2025-12-03 15:23:23] 2025-12-03 14:22:51,365 | INFO     | chi2: 3.681093577344783
[2025-12-03 15:23:23] 2025-12-03 14:22:51,365 | INFO     | sum of square deviations: 20751710017.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,366 | INFO     | sum of deviations: 250227723081.00012
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | mean x: 1764759043.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | mean y: 2372066.5270935963
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | intersect: -21277398943.631233
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | chi2: 2.721678274214016
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | current chi2=2.721678274214016 (change=26.06332284067618 %)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,367 | INFO     | sum of square deviations: 19994421400.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,368 | INFO     | sum of deviations: 245763088550.99997
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | mean x: 1764758891.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | mean y: 2371167.3815461346
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | intersect: -21689309072.987774
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | chi2: 2.7199908804349175
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | current chi2=2.7199908804349175 (change=0.06199828227625296 %)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | right removable region: 400
[2025-12-03 15:23:23] 2025-12-03 14:22:51,369 | INFO     | sum of square deviations: 20751710017.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | sum of deviations: 112210249720.49997
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | mean x: 1764759348.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | mean y: 2382841.2290640394
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | intersect: -9540160256.413363
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | chi2: 1.4289678468504539
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | current chi2=1.4289678468504539 (change=61.180887776257364 %)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,371 | INFO     | sum of square deviations: 19994421400.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | sum of deviations: 76749881824.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | mean x: 1764759501.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | mean y: 2389948.506234414
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | intersect: -6771753720.864023
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | chi2: 1.0243084073629303
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | current chi2=1.0243084073629303 (change=28.318302639168657 %)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,373 | INFO     | sum of square deviations: 19255784295.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | sum of deviations: 66653779052.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | mean x: 1764759653.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | mean y: 2392031.477272727
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | intersect: -6106312668.528064
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | chi2: 1.0130020309772045
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | current chi2=1.0130020309772045 (change=1.103805875696546 %)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | left removable region: 30
[2025-12-03 15:23:23] 2025-12-03 14:22:51,375 | INFO     | sum of square deviations: 15706536352.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,376 | INFO     | sum of deviations: 83362672346.0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,376 | INFO     | mean x: 1764759775.5
[2025-12-03 15:23:23] 2025-12-03 14:22:51,376 | INFO     | mean y: 2405210.3675675676
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | intersect: -9364083214.115072
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | chi2: 0.03469577793422459
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | current memory leak: 5.31 B/s (using 370 data points, chi2=0.03)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | could have reported an average CPU frequency of 3796 MHz (17 samples)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | ..............................
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . Timing measurements:
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . get job = 0 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . initial setup = 1 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . payload setup = 4 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . stage-in = 0 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . payload execution = 25074 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . stage-out = 1 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | . log creation = 0 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,377 | INFO     | ..............................
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | 
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | job summary report
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | --------------------------------------------------
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | PanDA job id: 6900296047
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | task id: 47556173
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | errors: (none)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | pilot state: finished 
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | transexitcode: 0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | exeerrorcode: 0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | exeerrordiag: 
[2025-12-03 15:23:23] 2025-12-03 14:22:51,417 | INFO     | exitcode: 0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | exitmsg: OK
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | cpuconsumptiontime: 98439 s
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | nevents: 1000
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | neventsw: 0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | pid: 3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | pgrp: 3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | corecount: 4
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | event service: False
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | sizes: {0: 2284319, 3: 2284581, 10: 2284609, 25082: 2321671, 25083: 2321670, 25084: 2330910, 25089: 2331164}
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | --------------------------------------------------
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | 
[2025-12-03 15:23:23] 2025-12-03 14:22:51,418 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,436 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | job 6900296047 has completed (purged errors)
[2025-12-03 15:23:23] 2025-12-03 14:22:51,437 | INFO     | overall cleanup function is called
[2025-12-03 15:23:23] 2025-12-03 14:22:52,447 | INFO     | --- collectZombieJob: --- 10, [3508520]
[2025-12-03 15:23:23] 2025-12-03 14:22:52,447 | INFO     | zombie collector waiting for pid 3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:52,447 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-03 15:23:23] 2025-12-03 14:22:52,447 | INFO     | collected zombie processes
[2025-12-03 15:23:23] 2025-12-03 14:22:52,447 | INFO     | will attempt to kill all subprocesses of pid=3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:52,497 | INFO     | process IDs to be killed: [3508520] (in reverse order)
[2025-12-03 15:23:23] 2025-12-03 14:22:52,532 | WARNING  | found no corresponding commands to process id(s)
[2025-12-03 15:23:23] 2025-12-03 14:22:52,532 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-03 15:23:23] 2025-12-03 14:22:52,534 | INFO     | did not find any defunct processes belonging to 3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:52,535 | INFO     | did not find any defunct processes belonging to 3508520
[2025-12-03 15:23:23] 2025-12-03 14:22:52,536 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-03 15:23:23] 2025-12-03 14:22:52,536 | INFO     | ready for new job
[2025-12-03 15:23:23] 2025-12-03 14:22:52,536 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-03 15:23:23] 2025-12-03 14:22:52,538 | INFO     | ***************************************
[2025-12-03 15:23:23] 2025-12-03 14:22:52,538 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-03 15:23:23] 2025-12-03 14:22:52,538 | INFO     | ***************************************
[2025-12-03 15:23:23] 2025-12-03 14:22:52,538 | INFO     | 
[2025-12-03 15:23:23] 2025-12-03 14:22:52,538 | INFO     | architecture information:
[2025-12-03 15:23:23] 2025-12-03 14:22:52,539 | INFO     | executing command: cat /etc/os-release
[2025-12-03 15:23:23] 2025-12-03 14:22:52,553 | INFO     | cat /etc/os-release:
[2025-12-03 15:23:23] NAME="CentOS Linux"
[2025-12-03 15:23:23] VERSION="7 (Core)"
[2025-12-03 15:23:23] ID="centos"
[2025-12-03 15:23:23] ID_LIKE="rhel fedora"
[2025-12-03 15:23:23] VERSION_ID="7"
[2025-12-03 15:23:23] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-03 15:23:23] ANSI_COLOR="0;31"
[2025-12-03 15:23:23] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-03 15:23:23] HOME_URL="https://www.centos.org/"
[2025-12-03 15:23:23] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-03 15:23:23] 
[2025-12-03 15:23:23] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-03 15:23:23] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-03 15:23:23] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-03 15:23:23] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-03 15:23:23] 
[2025-12-03 15:23:23] 2025-12-03 14:22:52,553 | INFO     | ***************************************
[2025-12-03 15:23:23] 2025-12-03 14:22:53,056 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-03 15:23:23] 2025-12-03 14:22:53,072 | INFO     | sufficient remaining disk space (220399140864 B)
[2025-12-03 15:23:23] 2025-12-03 14:22:53,072 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-03 15:23:23] 2025-12-03 14:22:53,072 | INFO     | current server update state: UPDATING_FINAL
[2025-12-03 15:23:23] 2025-12-03 14:22:53,073 | INFO     | update_server=False
[2025-12-03 15:23:23] 2025-12-03 14:22:53,073 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-03 15:23:23] 2025-12-03 14:22:53,073 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:23:23] 2025-12-03 14:22:53,073 | INFO     | aborting loop
[2025-12-03 15:23:23] 2025-12-03 14:22:53,073 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-03 15:23:23] 2025-12-03 14:22:53,133 | INFO     | all job control threads have been joined
[2025-12-03 15:23:23] 2025-12-03 14:22:53,562 | INFO     | all data control threads have been joined
[2025-12-03 15:23:23] 2025-12-03 14:22:53,618 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-03 15:23:23] 2025-12-03 14:22:54,037 | INFO     | all payload control threads have been joined
[2025-12-03 15:23:23] 2025-12-03 14:22:54,077 | INFO     | [job] retrieve thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,078 | INFO     | [job] queue monitor thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,078 | INFO     | [job] job monitor thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,139 | INFO     | [job] control thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,348 | INFO     | [payload] execute_payloads thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,559 | INFO     | [payload] failed_post thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,563 | INFO     | [data] control thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:54,699 | INFO     | [data] copytool_in thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,016 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,043 | INFO     | [payload] control thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,075 | INFO     | [payload] validate_post thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,100 | INFO     | [job] validate thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,124 | INFO     | [job] create_data_payload thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,306 | INFO     | [payload] validate_pre thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:55,624 | INFO     | [data] copytool_out thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:22:56,156 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-03 15:23:23] 2025-12-03 14:22:58,025 | INFO     | [monitor] cgroup control has ended
[2025-12-03 15:23:23] 2025-12-03 14:23:00,163 | INFO     | [data] queue_monitor thread has finished
[2025-12-03 15:23:23] 2025-12-03 14:23:01,745 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140698969859904)>', '<ExcThread(monitor, started 140697936054016)>']
[2025-12-03 15:23:23] 2025-12-03 14:23:06,770 | INFO     | all workflow threads have been joined
[2025-12-03 15:23:23] 2025-12-03 14:23:06,770 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-03 15:23:23] 2025-12-03 14:23:06,770 | INFO     | traces error code: 0
[2025-12-03 15:23:23] 2025-12-03 14:23:06,771 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | INFO     | PID=3501948 has CPU usage=2.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i P
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | INFO     | found 0 job(s) in 20 queues
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-03 15:23:23] 2025-12-03 14:23:23,689 | INFO     | [monitor] control thread has ended
[2025-12-03 15:23:23] 2025-12-03 14:23:23,767 [wrapper] ==== pilot stdout END ====
[2025-12-03 15:23:23] 2025-12-03 14:23:23,772 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-03 15:23:23] 2025-12-03 14:23:23,776 [wrapper] pilotpid: 3501948
[2025-12-03 15:23:23] 2025-12-03 14:23:23,780 [wrapper] Pilot exit status: 0
[2025-12-03 15:23:23] 2025-12-03 14:23:23,791 [wrapper] pandaids: 6900296047
[2025-12-03 15:23:23] 2025-12-03 14:23:23,815 [wrapper] cleanup supervisor_pilot 3561954 3501949
[2025-12-03 15:23:23] 2025-12-03 14:23:23,819 [wrapper] Test setup, not cleaning
[2025-12-03 15:23:23] 2025-12-03 14:23:23,824 [wrapper] apfmon messages muted
[2025-12-03 15:23:23] 2025-12-03 14:23:23,828 [wrapper] ==== wrapper stdout END ====
[2025-12-03 15:23:23] 2025-12-03 14:23:23,832 [wrapper] ==== wrapper stderr END ====
[2025-12-03 15:23:23]  *** Error codes and diagnostics ***
[2025-12-03 15:23:23]     "exeErrorCode": 0,
[2025-12-03 15:23:23]     "exeErrorDiag": "",
[2025-12-03 15:23:23]     "pilotErrorCode": 0,
[2025-12-03 15:23:23]     "pilotErrorDiag": "",
[2025-12-03 15:23:23]  *** Listing of results directory ***
[2025-12-03 15:23:23] total 1316304
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc    576529 Nov 27 17:16 pilot3.tar.gz
[2025-12-03 15:23:23] -rwx------ 1 boinc boinc     36292 Nov 27 17:20 runpilot2-wrapper.sh
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc      5112 Nov 27 17:22 queuedata.json
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc       100 Dec  3 08:24 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-03 15:23:23] -rwxr-xr-x 1 boinc boinc      7986 Dec  3 08:24 run_atlas
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc       105 Dec  3 08:24 job.xml
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc 409963906 Dec  3 08:24 EVNT.47483658._003439.pool.root.1
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc    590105 Dec  3 08:24 input.tar.gz
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc     15847 Dec  3 08:24 start_atlas.sh
[2025-12-03 15:23:23] drwxrwx--x 2 boinc boinc      4096 Dec  3 08:24 shared
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc         0 Dec  3 08:24 boinc_setup_complete
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc      6378 Dec  3 08:24 init_data.xml
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc         0 Dec  3 08:24 boinc_lockfile
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc      2787 Dec  3 08:24 pandaJob.out
[2025-12-03 15:23:23] -rw------- 1 boinc boinc    985779 Dec  3 08:24 agis_schedconf.cvmfs.json
[2025-12-03 15:23:23] drwx------ 5 boinc boinc      4096 Dec  3 08:24 pilot3
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc       531 Dec  3 15:18 boinc_task_state.xml
[2025-12-03 15:23:23] -rw------- 1 boinc boinc 924415965 Dec  3 15:22 HITS.47556173._003957.pool.root.1
[2025-12-03 15:23:23] -rw------- 1 boinc boinc      1028 Dec  3 15:22 memory_monitor_summary.json
[2025-12-03 15:23:23] -rw------- 1 boinc boinc   1516240 Dec  3 15:22 agis_ddmendpoints.agis.ALL.json
[2025-12-03 15:23:23] -rw------- 1 boinc boinc   1264516 Dec  3 15:22 log.47556173._003957.job.log.tgz.1
[2025-12-03 15:23:23] -rw------- 1 boinc boinc        95 Dec  3 15:22 pilot_heartbeat.json
[2025-12-03 15:23:23] -rw------- 1 boinc boinc      8570 Dec  3 15:22 heartbeat.json
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc      8192 Dec  3 15:23 boinc_mmap_file
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc        28 Dec  3 15:23 wrapper_checkpoint.txt
[2025-12-03 15:23:23] -rw------- 1 boinc boinc       747 Dec  3 15:23 pilotlog.txt
[2025-12-03 15:23:23] -rw------- 1 boinc boinc   3539042 Dec  3 15:23 log.47556173._003957.job.log.1
[2025-12-03 15:23:23] -rw------- 1 boinc boinc       353 Dec  3 15:23 output.list
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc       620 Dec  3 15:23 runtime_log
[2025-12-03 15:23:23] -rw------- 1 boinc boinc   4823040 Dec  3 15:23 result.tar.gz
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc      8898 Dec  3 15:23 runtime_log.err
[2025-12-03 15:23:23] -rw------- 1 boinc boinc       665 Dec  3 15:23 BfrNDmLuti8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDma4NKDmkJktbn.diag
[2025-12-03 15:23:23] -rw-r--r-- 1 boinc boinc     21016 Dec  3 15:23 stderr.txt
[2025-12-03 15:23:23] HITS file was successfully produced:
[2025-12-03 15:23:23] -rw------- 1 boinc boinc 924415965 Dec  3 15:22 shared/HITS.pool.root.1
[2025-12-03 15:23:23]  *** Contents of shared directory: ***
[2025-12-03 15:23:23] total 1308424
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc 409963906 Dec  3 08:24 ATLAS.root_0
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc    590105 Dec  3 08:24 input.tar.gz
[2025-12-03 15:23:23] -rw-r--r-- 2 boinc boinc     15847 Dec  3 08:24 start_atlas.sh
[2025-12-03 15:23:23] -rw------- 1 boinc boinc 924415965 Dec  3 15:22 HITS.pool.root.1
[2025-12-03 15:23:23] -rw------- 1 boinc boinc   4823040 Dec  3 15:23 result.tar.gz
15:23:25 (3498165): run_atlas exited; CPU time 98410.543255
15:23:25 (3498165): called boinc_finish(0)

</stderr_txt>
]]>

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