Stderr output

<core_client_version>7.7.0</core_client_version>
<![CDATA[
<stderr_txt>
08:32:29 (21142): wrapper (7.7.26015): starting
08:32:29 (21142): wrapper: running run_atlas (--nthreads 12)
[2025-11-29 08:32:29] Arguments: --nthreads 12
[2025-11-29 08:32:29] Threads: 12
[2025-11-29 08:32:29] Checking for CVMFS
[2025-11-29 08:32:29] Probing /cvmfs/atlas.cern.ch... OK
[2025-11-29 08:32:29] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-11-29 08:32:29] Running cvmfs_config stat atlas.cern.ch
[2025-11-29 08:32:29] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-11-29 08:32:29] 2.11.2.0 2981 292020 90068 153444 3 82 13333299 20275200 1 130560 1 132715228 99.969 16974949 14292 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch http://192.41.237.109:6081 1
[2025-11-29 08:32:29] CVMFS is ok
[2025-11-29 08:32:29] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-11-29 08:32:29] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-11-29 08:32:29] Further information can be found at the LHC@home message board.
[2025-11-29 08:32:29] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-11-29 08:32:29] Checking for apptainer binary...
[2025-11-29 08:32:29] Using apptainer found in PATH at /usr/bin/apptainer
[2025-11-29 08:32:29] Running /usr/bin/apptainer --version
[2025-11-29 08:32:29] apptainer version 1.3.2-1.el7
[2025-11-29 08:32:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-11-29 08:32:30] c-205-30.aglt2.org
[2025-11-29 08:32:30] apptainer works
[2025-11-29 08:32:30] Set ATHENA_PROC_NUMBER=12
[2025-11-29 08:32:30] Set ATHENA_CORE_NUMBER=12
[2025-11-29 08:32:30] Starting ATLAS job with PandaID=6900296025
[2025-11-29 08:32:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/tmp/boinchome/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-11-29 15:41:57]  *** The last 200 lines of the pilot log: ***
[2025-11-29 15:41:57] 2025-11-29 20:41:24,495 | INFO     | monitor loop #1928: job 0:6900296025 is in state 'finished'
[2025-11-29 15:41:57] 2025-11-29 20:41:24,495 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,909 | INFO     | CPU arch script returned: x86-64-v2
[2025-11-29 15:41:57] 2025-11-29 20:41:24,912 | INFO     | found 12 cores (6 cores per socket, 2 sockets) , CPU MHz: 1762.3333333333333
[2025-11-29 15:41:57] 2025-11-29 20:41:24,915 | INFO     | using path: /tmp/boinchome/slots/0/PanDA_Pilot-6900296025/memory_monitor_summary.json (trf name=prmon)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,915 | INFO     | extracted standard info from prmon json
[2025-11-29 15:41:57] 2025-11-29 20:41:24,916 | INFO     | extracted standard memory fields from prmon json
[2025-11-29 15:41:57] 2025-11-29 20:41:24,916 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-11-29 15:41:57] 2025-11-29 20:41:24,923 | INFO     | fitting pss+swap vs Time
[2025-11-29 15:41:57] 2025-11-29 20:41:24,924 | INFO     | sum of square deviations: 23137757338.20444
[2025-11-29 15:41:57] 2025-11-29 20:41:24,928 | INFO     | sum of deviations: 382192793541.6247
[2025-11-29 15:41:57] 2025-11-29 20:41:24,928 | INFO     | mean x: 1764436005.2660332
[2025-11-29 15:41:57] 2025-11-29 20:41:24,928 | INFO     | mean y: 3432073.0926365796
[2025-11-29 15:41:57] 2025-11-29 20:41:24,928 | INFO     | intersect: -29141774872.46443
[2025-11-29 15:41:57] 2025-11-29 20:41:24,929 | INFO     | chi2: 4.884382853278209
[2025-11-29 15:41:57] 2025-11-29 20:41:24,929 | INFO     | sum of square deviations: 22323152967.846333
[2025-11-29 15:41:57] 2025-11-29 20:41:24,933 | INFO     | sum of deviations: 517161269588.6925
[2025-11-29 15:41:57] 2025-11-29 20:41:24,933 | INFO     | mean x: 1764435852.7692308
[2025-11-29 15:41:57] 2025-11-29 20:41:24,933 | INFO     | mean y: 3457298.5072115385
[2025-11-29 15:41:57] 2025-11-29 20:41:24,933 | INFO     | intersect: -40873290132.30062
[2025-11-29 15:41:57] 2025-11-29 20:41:24,934 | INFO     | chi2: 2.656122616381643
[2025-11-29 15:41:57] 2025-11-29 20:41:24,934 | INFO     | current chi2=2.656122616381643 (change=45.62009784718338 %)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,934 | INFO     | sum of square deviations: 21527897797.479324
[2025-11-29 15:41:57] 2025-11-29 20:41:24,938 | INFO     | sum of deviations: 550200139283.7467
[2025-11-29 15:41:57] 2025-11-29 20:41:24,938 | INFO     | mean x: 1764435700.272506
[2025-11-29 15:41:57] 2025-11-29 20:41:24,938 | INFO     | mean y: 3463591.2165450123
[2025-11-29 15:41:57] 2025-11-29 20:41:24,938 | INFO     | intersect: -45091174871.84866
[2025-11-29 15:41:57] 2025-11-29 20:41:24,939 | INFO     | chi2: 2.3274314395053124
[2025-11-29 15:41:57] 2025-11-29 20:41:24,939 | INFO     | current chi2=2.3274314395053124 (change=12.374849521220401 %)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,939 | INFO     | right removable region: 410
[2025-11-29 15:41:57] 2025-11-29 20:41:24,939 | INFO     | sum of square deviations: 22323084647.846336
[2025-11-29 15:41:57] 2025-11-29 20:41:24,943 | INFO     | sum of deviations: 251857726035.46152
[2025-11-29 15:41:57] 2025-11-29 20:41:24,943 | INFO     | mean x: 1764436157.7692308
[2025-11-29 15:41:57] 2025-11-29 20:41:24,943 | INFO     | mean y: 3456382.9110576925
[2025-11-29 15:41:57] 2025-11-29 20:41:24,943 | INFO     | intersect: -19903598822.08627
[2025-11-29 15:41:57] 2025-11-29 20:41:24,944 | INFO     | chi2: 2.6737753393621992
[2025-11-29 15:41:57] 2025-11-29 20:41:24,944 | INFO     | current chi2=2.6737753393621992 (change=45.2586863135091 %)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,944 | INFO     | sum of square deviations: 21527811908.55965
[2025-11-29 15:41:57] 2025-11-29 20:41:24,948 | INFO     | sum of deviations: 220342686529.6886
[2025-11-29 15:41:57] 2025-11-29 20:41:24,948 | INFO     | mean x: 1764436310.2676399
[2025-11-29 15:41:57] 2025-11-29 20:41:24,948 | INFO     | mean y: 3462419.111922141
[2025-11-29 15:41:57] 2025-11-29 20:41:24,948 | INFO     | intersect: -18055996594.477856
[2025-11-29 15:41:57] 2025-11-29 20:41:24,949 | INFO     | chi2: 2.6236354141240823
[2025-11-29 15:41:57] 2025-11-29 20:41:24,949 | INFO     | current chi2=2.6236354141240823 (change=1.875248249169554 %)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,949 | INFO     | left removable region: 20
[2025-11-29 15:41:57] 2025-11-29 20:41:24,950 | INFO     | sum of square deviations: 18393672319.03576
[2025-11-29 15:41:57] 2025-11-29 20:41:24,953 | INFO     | sum of deviations: 348474474845.1385
[2025-11-29 15:41:57] 2025-11-29 20:41:24,953 | INFO     | mean x: 1764436279.7794871
[2025-11-29 15:41:57] 2025-11-29 20:41:24,953 | INFO     | mean y: 3502901.792307692
[2025-11-29 15:41:57] 2025-11-29 20:41:24,953 | INFO     | intersect: -33424351815.263947
[2025-11-29 15:41:57] 2025-11-29 20:41:24,954 | INFO     | chi2: 0.03185296486383553
[2025-11-29 15:41:57] 2025-11-29 20:41:24,954 | INFO     | current memory leak: 18.95 B/s (using 390 data points, chi2=0.03)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,954 | INFO     | could have reported an average CPU frequency of 2347 MHz (18 samples)
[2025-11-29 15:41:57] 2025-11-29 20:41:24,954 | INFO     | ..............................
[2025-11-29 15:41:57] 2025-11-29 20:41:24,954 | INFO     | . Timing measurements:
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . get job = 0 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . initial setup = 2 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . payload setup = 7 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . stage-in = 0 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . payload execution = 25679 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . stage-out = 3 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | . log creation = 0 s
[2025-11-29 15:41:57] 2025-11-29 20:41:24,955 | INFO     | ..............................
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | 
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | job summary report
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | --------------------------------------------------
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | PanDA job id: 6900296025
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | task id: 47556173
[2025-11-29 15:41:57] 2025-11-29 20:41:25,035 | INFO     | errors: (none)
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | status: LOG_TRANSFER = DONE 
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | pilot state: finished 
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | transexitcode: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | exeerrorcode: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | exeerrordiag: 
[2025-11-29 15:41:57] 2025-11-29 20:41:25,036 | INFO     | exitcode: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | exitmsg: OK
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | cpuconsumptiontime: 294974 s
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | nevents: 1000
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | neventsw: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | pid: 31294
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | pgrp: 31294
[2025-11-29 15:41:57] 2025-11-29 20:41:25,037 | INFO     | corecount: 12
[2025-11-29 15:41:57] 2025-11-29 20:41:25,038 | INFO     | event service: False
[2025-11-29 15:41:57] 2025-11-29 20:41:25,038 | INFO     | sizes: {0: 2284145, 1: 2284344, 5: 2284606, 11: 2284662, 25691: 2321871, 25695: 2330865, 25696: 2331049, 25703: 2331295}
[2025-11-29 15:41:57] 2025-11-29 20:41:25,038 | INFO     | --------------------------------------------------
[2025-11-29 15:41:57] 2025-11-29 20:41:25,038 | INFO     | 
[2025-11-29 15:41:57] 2025-11-29 20:41:25,038 | INFO     | executing command: ls -lF /tmp/boinchome/slots/0
[2025-11-29 15:41:57] 2025-11-29 20:41:25,060 | INFO     | queue jobs had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,061 | INFO     | queue payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,061 | INFO     | queue data_in had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,061 | INFO     | queue data_out had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,061 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,062 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,063 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,064 | INFO     | queue completed_jobids has 1 job(s)
[2025-11-29 15:41:57] 2025-11-29 20:41:25,064 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,064 | INFO     | queue messages had 0 job(s) [purged]
[2025-11-29 15:41:57] 2025-11-29 20:41:25,064 | INFO     | job 6900296025 has completed (purged errors)
[2025-11-29 15:41:57] 2025-11-29 20:41:25,064 | INFO     | overall cleanup function is called
[2025-11-29 15:41:57] 2025-11-29 20:41:26,081 | INFO     | --- collectZombieJob: --- 10, [31294]
[2025-11-29 15:41:57] 2025-11-29 20:41:26,081 | INFO     | zombie collector waiting for pid 31294
[2025-11-29 15:41:57] 2025-11-29 20:41:26,089 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-11-29 15:41:57] 2025-11-29 20:41:26,089 | INFO     | collected zombie processes
[2025-11-29 15:41:57] 2025-11-29 20:41:26,089 | INFO     | will attempt to kill all subprocesses of pid=31294
[2025-11-29 15:41:57] 2025-11-29 20:41:26,181 | INFO     | process IDs to be killed: [31294] (in reverse order)
[2025-11-29 15:41:57] 2025-11-29 20:41:26,231 | WARNING  | found no corresponding commands to process id(s)
[2025-11-29 15:41:57] 2025-11-29 20:41:26,231 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-11-29 15:41:57] 2025-11-29 20:41:26,235 | INFO     | did not find any defunct processes belonging to 31294
[2025-11-29 15:41:57] 2025-11-29 20:41:26,238 | INFO     | did not find any defunct processes belonging to 31294
[2025-11-29 15:41:57] 2025-11-29 20:41:26,240 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-11-29 15:41:57] 2025-11-29 20:41:26,240 | INFO     | ready for new job
[2025-11-29 15:41:57] 2025-11-29 20:41:26,241 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-11-29 15:41:57] 2025-11-29 20:41:26,243 | INFO     | ***************************************
[2025-11-29 15:41:57] 2025-11-29 20:41:26,243 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-11-29 15:41:57] 2025-11-29 20:41:26,243 | INFO     | ***************************************
[2025-11-29 15:41:57] 2025-11-29 20:41:26,243 | INFO     | 
[2025-11-29 15:41:57] 2025-11-29 20:41:26,243 | INFO     | architecture information:
[2025-11-29 15:41:57] 2025-11-29 20:41:26,244 | INFO     | executing command: cat /etc/os-release
[2025-11-29 15:41:57] 2025-11-29 20:41:26,260 | INFO     | cat /etc/os-release:
[2025-11-29 15:41:57] NAME="CentOS Linux"
[2025-11-29 15:41:57] VERSION="7 (Core)"
[2025-11-29 15:41:57] ID="centos"
[2025-11-29 15:41:57] ID_LIKE="rhel fedora"
[2025-11-29 15:41:57] VERSION_ID="7"
[2025-11-29 15:41:57] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-11-29 15:41:57] ANSI_COLOR="0;31"
[2025-11-29 15:41:57] CPE_NAME="cpe:/o:centos:centos:7"
[2025-11-29 15:41:57] HOME_URL="https://www.centos.org/"
[2025-11-29 15:41:57] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-11-29 15:41:57] 
[2025-11-29 15:41:57] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-11-29 15:41:57] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-11-29 15:41:57] REDHAT_SUPPORT_PRODUCT="centos"
[2025-11-29 15:41:57] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-11-29 15:41:57] 
[2025-11-29 15:41:57] 2025-11-29 20:41:26,260 | INFO     | ***************************************
[2025-11-29 15:41:57] 2025-11-29 20:41:26,763 | INFO     | executing command: df -mP /tmp/boinchome/slots/0
[2025-11-29 15:41:57] 2025-11-29 20:41:26,780 | INFO     | sufficient remaining disk space (28251783168 B)
[2025-11-29 15:41:57] 2025-11-29 20:41:26,780 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-11-29 15:41:57] 2025-11-29 20:41:26,780 | INFO     | current server update state: UPDATING_FINAL
[2025-11-29 15:41:57] 2025-11-29 20:41:26,780 | INFO     | update_server=False
[2025-11-29 15:41:57] 2025-11-29 20:41:26,780 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-11-29 15:41:57] 2025-11-29 20:41:26,781 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:41:57] 2025-11-29 20:41:26,933 | INFO     | all job control threads have been joined
[2025-11-29 15:41:57] 2025-11-29 20:41:26,998 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2025-11-29 15:41:57] 2025-11-29 20:41:26,998 | WARNING  | cannot recover job monitoring - aborting pilot
[2025-11-29 15:41:57] 2025-11-29 20:41:26,999 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-11-29 15:41:57] 2025-11-29 20:41:26,999 | INFO     | will abort loop
[2025-11-29 15:41:57] 2025-11-29 20:41:27,126 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-11-29 15:41:57] 2025-11-29 20:41:27,176 | INFO     | all payload control threads have been joined
[2025-11-29 15:41:57] 2025-11-29 20:41:27,546 | INFO     | all data control threads have been joined
[2025-11-29 15:41:57] 2025-11-29 20:41:27,786 | INFO     | [job] retrieve thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:27,786 | INFO     | [job] queue monitor thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:27,888 | INFO     | [monitor] cgroup control has ended
[2025-11-29 15:41:57] 2025-11-29 20:41:27,938 | INFO     | [job] control thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,000 | INFO     | [job] job monitor thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,182 | INFO     | [payload] control thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,238 | INFO     | [payload] validate_post thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,268 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-11-29 15:41:57] 2025-11-29 20:41:28,497 | INFO     | [payload] execute_payloads thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,552 | INFO     | [data] control thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,713 | INFO     | [job] create_data_payload thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,846 | INFO     | [payload] failed_post thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:28,984 | INFO     | [payload] validate_pre thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:29,017 | INFO     | [job] validate thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:29,030 | INFO     | [data] copytool_in thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:29,093 | INFO     | [payload] run_realtimelog thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:29,131 | INFO     | [data] copytool_out thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:32,274 | INFO     | [data] queue_monitor thread has finished
[2025-11-29 15:41:57] 2025-11-29 20:41:33,263 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140178829068096)>', '<ExcThread(monitor, started 140178253403904)>']
[2025-11-29 15:41:57] 2025-11-29 20:41:38,289 | INFO     | all workflow threads have been joined
[2025-11-29 15:41:57] 2025-11-29 20:41:38,289 | INFO     | end of generic workflow (traces error code: 0)
[2025-11-29 15:41:57] 2025-11-29 20:41:38,289 | INFO     | traces error code: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:38,290 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-11-29 15:41:57] 2025-11-29 20:41:57,583 | INFO     | PID=24817 has CPU usage=1.2% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR 
[2025-11-29 15:41:57] 2025-11-29 20:41:57,584 | INFO     | found 0 job(s) in 20 queues
[2025-11-29 15:41:57] 2025-11-29 20:41:57,584 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-11-29 15:41:57] 2025-11-29 20:41:57,584 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-11-29 15:41:57] 2025-11-29 20:41:57,584 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-11-29 15:41:57] 2025-11-29 20:41:57,584 | INFO     | [monitor] control thread has ended
[2025-11-29 15:41:57] 2025-11-29 20:41:57,666 [wrapper] ==== pilot stdout END ====
[2025-11-29 15:41:57] 2025-11-29 20:41:57,670 [wrapper] ==== wrapper stdout RESUME ====
[2025-11-29 15:41:57] 2025-11-29 20:41:57,673 [wrapper] pilotpid: 24817
[2025-11-29 15:41:57] 2025-11-29 20:41:57,678 [wrapper] Pilot exit status: 0
[2025-11-29 15:41:57] 2025-11-29 20:41:57,692 [wrapper] pandaids: 6900296025
[2025-11-29 15:41:57] 2025-11-29 20:41:57,729 [wrapper] cleanup supervisor_pilot 32442 24818
[2025-11-29 15:41:57] 2025-11-29 20:41:57,733 [wrapper] Test setup, not cleaning
[2025-11-29 15:41:57] 2025-11-29 20:41:57,737 [wrapper] apfmon messages muted
[2025-11-29 15:41:57] 2025-11-29 20:41:57,741 [wrapper] ==== wrapper stdout END ====
[2025-11-29 15:41:57] 2025-11-29 20:41:57,745 [wrapper] ==== wrapper stderr END ====
[2025-11-29 15:41:57]  *** Error codes and diagnostics ***
[2025-11-29 15:41:57]     "exeErrorCode": 0,
[2025-11-29 15:41:57]     "exeErrorDiag": "",
[2025-11-29 15:41:57]     "pilotErrorCode": 0,
[2025-11-29 15:41:57]     "pilotErrorDiag": "",
[2025-11-29 15:41:57]  *** Listing of results directory ***
[2025-11-29 15:41:57] total 1305760
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas    576529 Nov 27 11:16 pilot3.tar.gz
[2025-11-29 15:41:57] -rwx------ 1 boincer umatlas     36292 Nov 27 11:20 runpilot2-wrapper.sh
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas      5112 Nov 27 11:22 queuedata.json
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas       100 Nov 29 08:32 wrapper_26015_x86_64-pc-linux-gnu
[2025-11-29 15:41:57] -rwxr-xr-x 1 boincer umatlas      7986 Nov 29 08:32 run_atlas
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas       105 Nov 29 08:32 job.xml
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas 411408717 Nov 29 08:32 EVNT.47483658._003437.pool.root.1
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 08:32 start_atlas.sh
[2025-11-29 15:41:57] drwxrwx--x 2 boincer umatlas      4096 Nov 29 08:32 shared
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas    590108 Nov 29 08:32 input.tar.gz
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas         0 Nov 29 08:32 boinc_lockfile
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas      2787 Nov 29 08:32 pandaJob.out
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas        57 Nov 29 08:32 setup.sh.local
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas    991826 Nov 29 08:32 agis_schedconf.cvmfs.json
[2025-11-29 15:41:57] drwx------ 5 boincer umatlas      4096 Nov 29 08:32 pilot3
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas       532 Nov 29 15:31 boinc_task_state.xml
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas      5955 Nov 29 15:36 init_data.xml
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas 910221501 Nov 29 15:40 HITS.47556173._003935.pool.root.1
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas      1065 Nov 29 15:41 memory_monitor_summary.json
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas   1516240 Nov 29 15:41 agis_ddmendpoints.agis.ALL.json
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas   2177131 Nov 29 15:41 log.47556173._003935.job.log.tgz.1
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas      8670 Nov 29 15:41 heartbeat.json
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas      8192 Nov 29 15:41 boinc_mmap_file
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas        29 Nov 29 15:41 wrapper_checkpoint.txt
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas       745 Nov 29 15:41 pilotlog.txt
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas        95 Nov 29 15:41 pilot_heartbeat.json
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas   3598483 Nov 29 15:41 log.47556173._003935.job.log.1
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas       353 Nov 29 15:41 output.list
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas       620 Nov 29 15:41 runtime_log
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas   5795840 Nov 29 15:41 result.tar.gz
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas       670 Nov 29 15:41 WaALDmMuti8n9Rq4apOajLDm4fhM0noT9bVo0NGKDmNtKKDmakN8Hn.diag
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas      9345 Nov 29 15:41 runtime_log.err
[2025-11-29 15:41:57] -rw-r--r-- 1 boincer umatlas     21324 Nov 29 15:41 stderr.txt
[2025-11-29 15:41:57] HITS file was successfully produced:
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas 910221501 Nov 29 15:40 shared/HITS.pool.root.1
[2025-11-29 15:41:57]  *** Contents of shared directory: ***
[2025-11-29 15:41:57] total 1296920
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas 411408717 Nov 29 08:32 ATLAS.root_0
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas     15847 Nov 29 08:32 start_atlas.sh
[2025-11-29 15:41:57] -rw-r--r-- 2 boincer umatlas    590108 Nov 29 08:32 input.tar.gz
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas 910221501 Nov 29 15:40 HITS.pool.root.1
[2025-11-29 15:41:57] -rw------- 1 boincer umatlas   5795840 Nov 29 15:41 result.tar.gz
15:41:59 (21142): run_atlas exited; CPU time 288351.215465
15:41:59 (21142): called boinc_finish(0)

</stderr_txt>
]]>

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