Stderr output

<core_client_version>8.2.2</core_client_version>
<![CDATA[
<stderr_txt>
01:01:34 (873543): wrapper (7.7.26015): starting
01:01:34 (873543): wrapper: running run_atlas (--nthreads 4)
[2025-12-02 01:01:34] Arguments: --nthreads 4
[2025-12-02 01:01:34] Threads: 4
[2025-12-02 01:01:34] Checking for CVMFS
[2025-12-02 01:01:34] Probing /cvmfs/atlas.cern.ch... OK
[2025-12-02 01:01:34] Probing /cvmfs/atlas-condb.cern.ch... OK
[2025-12-02 01:01:34] Running cvmfs_config stat atlas.cern.ch
[2025-12-02 01:01:34] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2025-12-02 01:01:34] 2.9.2.0 2999 6151 93520 153537 3 81 34991013 36864000 0 130560 1 2446289 99.982 223223 394 http://cvmfs-stratum-one.cern.ch:8000/cvmfs/atlas.cern.ch http://130.183.36.13:3128 1
[2025-12-02 01:01:34] CVMFS is ok
[2025-12-02 01:01:34] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2025-12-02 01:01:34] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2025-12-02 01:01:34] Further information can be found at the LHC@home message board.
[2025-12-02 01:01:34] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2025-12-02 01:01:34] Checking for apptainer binary...
[2025-12-02 01:01:34] Using apptainer found in PATH at /usr/bin/apptainer
[2025-12-02 01:01:34] Running /usr/bin/apptainer --version
[2025-12-02 01:01:34] apptainer version 1.4.1-1.1
[2025-12-02 01:01:34] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2025-12-02 01:01:35] belleA267b
[2025-12-02 01:01:35] apptainer works
[2025-12-02 01:01:35] Set ATHENA_PROC_NUMBER=4
[2025-12-02 01:01:35] Set ATHENA_CORE_NUMBER=4
[2025-12-02 01:01:35] Starting ATLAS job with PandaID=6897309776
[2025-12-02 01:01:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/local/data/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2025-12-02 06:58:21]  *** The last 200 lines of the pilot log: ***
[2025-12-02 06:58:21] 2025-12-02 05:57:49,541 | INFO     | extracted standard memory fields from prmon json
[2025-12-02 06:58:21] 2025-12-02 05:57:49,541 | WARNING  | GPU info not found in prmon json: 'gpu'
[2025-12-02 06:58:21] 2025-12-02 05:57:49,543 | INFO     | fitting pss+swap vs Time
[2025-12-02 06:58:21] 2025-12-02 05:57:49,543 | INFO     | sum of square deviations: 13294714387.5
[2025-12-02 06:58:21] 2025-12-02 05:57:49,544 | INFO     | sum of deviations: 231418473944.50006
[2025-12-02 06:58:21] 2025-12-02 05:57:49,544 | INFO     | mean x: 1764644371.5
[2025-12-02 06:58:21] 2025-12-02 05:57:49,544 | INFO     | mean y: 2774963.5457142857
[2025-12-02 06:58:21] 2025-12-02 05:57:49,545 | INFO     | intersect: -30714041931.08736
[2025-12-02 06:58:21] 2025-12-02 05:57:49,545 | INFO     | chi2: 4.327079432176249
[2025-12-02 06:58:21] 2025-12-02 05:57:49,545 | INFO     | sum of square deviations: 12733038740.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | sum of deviations: 278053485643.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | mean x: 1764644219.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | mean y: 2787521.947826087
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | intersect: -38532041911.29079
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | chi2: 3.1695198771425592
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | current chi2=3.1695198771425592 (change=26.751520816235857 %)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,546 | INFO     | sum of square deviations: 12187409905.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | sum of deviations: 272267412230.49997
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | mean x: 1764644066.5
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | mean y: 2785904.620588235
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | intersect: -39419460269.01062
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | chi2: 3.1668380589375165
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | current chi2=3.1668380589375165 (change=0.08461275868257127 %)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | right removable region: 339
[2025-12-02 06:58:21] 2025-12-02 05:57:49,548 | INFO     | sum of square deviations: 12733038740.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | sum of deviations: 125541570940.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | mean x: 1764644524.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | mean y: 2803670.3217391307
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | intersect: -17395733333.864624
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | chi2: 1.6848511726025834
[2025-12-02 06:58:21] 2025-12-02 05:57:49,549 | INFO     | current chi2=1.6848511726025834 (change=61.06262436335241 %)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,550 | INFO     | sum of square deviations: 12187409905.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | sum of deviations: 90079725776.00002
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | mean x: 1764644676.5
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | mean y: 2813517.776470588
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | intersect: -13040048730.254093
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | chi2: 1.231350666136755
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | current chi2=1.231350666136755 (change=26.916354028190387 %)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,551 | INFO     | sum of square deviations: 11657595320.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | sum of deviations: 78329084228.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | mean x: 1764644829.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | mean y: 2816901.1432835823
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | intersect: -11854089231.64274
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | chi2: 1.2184463988193912
[2025-12-02 06:58:21] 2025-12-02 05:57:49,552 | INFO     | current chi2=1.2184463988193912 (change=1.0479766383567835 %)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,553 | INFO     | left removable region: 30
[2025-12-02 06:58:21] 2025-12-02 05:57:49,553 | INFO     | sum of square deviations: 9148487810.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | sum of deviations: 92293288286.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | mean x: 1764644951.0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | mean y: 2838844.57605178
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | intersect: -17799544299.778526
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | chi2: 0.022797466555897844
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | current memory leak: 10.09 B/s (using 309 data points, chi2=0.02)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | could have reported an average CPU frequency of 3926 MHz (15 samples)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | ..............................
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . Timing measurements:
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . get job = 0 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . initial setup = 1 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . payload setup = 6 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . stage-in = 0 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . payload execution = 21332 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . stage-out = 1 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | . log creation = 0 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,554 | INFO     | ..............................
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | 
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | job summary report
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | --------------------------------------------------
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | PanDA job id: 6897309776
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | task id: 47531058
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | errors: (none)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | status: LOG_TRANSFER = DONE 
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | pilot state: finished 
[2025-12-02 06:58:21] 2025-12-02 05:57:49,593 | INFO     | transexitcode: 0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | exeerrorcode: 0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | exeerrordiag: 
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | exitcode: 0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | exitmsg: OK
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | cpuconsumptiontime: 83411 s
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | nevents: 1000
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | neventsw: 0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | pid: 884573
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | pgrp: 884573
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | corecount: 4
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | event service: False
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | sizes: {0: 2284281, 1: 2284480, 4: 2284742, 11: 2284770, 21343: 2338806, 21344: 2347806, 21346: 2347990, 21354: 2348236}
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | --------------------------------------------------
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | 
[2025-12-02 06:58:21] 2025-12-02 05:57:49,594 | INFO     | executing command: ls -lF /local/data/boinc/slots/0
[2025-12-02 06:58:21] 2025-12-02 05:57:49,610 | INFO     | queue jobs had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,610 | INFO     | queue payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,610 | INFO     | queue data_in had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,610 | INFO     | queue data_out had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,610 | INFO     | queue current_data_in had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue completed_jobids has 1 job(s)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | queue messages had 0 job(s) [purged]
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | job 6897309776 has completed (purged errors)
[2025-12-02 06:58:21] 2025-12-02 05:57:49,611 | INFO     | overall cleanup function is called
[2025-12-02 06:58:21] 2025-12-02 05:57:50,621 | INFO     | --- collectZombieJob: --- 10, [884573]
[2025-12-02 06:58:21] 2025-12-02 05:57:50,621 | INFO     | zombie collector waiting for pid 884573
[2025-12-02 06:58:21] 2025-12-02 05:57:50,621 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2025-12-02 06:58:21] 2025-12-02 05:57:50,621 | INFO     | collected zombie processes
[2025-12-02 06:58:21] 2025-12-02 05:57:50,621 | INFO     | will attempt to kill all subprocesses of pid=884573
[2025-12-02 06:58:21] 2025-12-02 05:57:50,664 | INFO     | process IDs to be killed: [884573] (in reverse order)
[2025-12-02 06:58:21] 2025-12-02 05:57:50,696 | WARNING  | found no corresponding commands to process id(s)
[2025-12-02 06:58:21] 2025-12-02 05:57:50,696 | INFO     | Do not look for orphan processes in BOINC jobs
[2025-12-02 06:58:21] 2025-12-02 05:57:50,698 | INFO     | did not find any defunct processes belonging to 884573
[2025-12-02 06:58:21] 2025-12-02 05:57:50,699 | INFO     | did not find any defunct processes belonging to 884573
[2025-12-02 06:58:21] 2025-12-02 05:57:50,700 | WARNING  | condor_chirp not found. condor_config_val not found. | If you're on a worker node/container, HTCondor may not expose configs to your env. Try: export CONDOR_CONFIG
[2025-12-02 06:58:21] 2025-12-02 05:57:50,700 | INFO     | ready for new job
[2025-12-02 06:58:21] 2025-12-02 05:57:50,700 | INFO     | pilot has finished with previous job - re-establishing logging
[2025-12-02 06:58:21] 2025-12-02 05:57:50,701 | INFO     | ***************************************
[2025-12-02 06:58:21] 2025-12-02 05:57:50,701 | INFO     | ***  PanDA Pilot version 3.11.1.15  ***
[2025-12-02 06:58:21] 2025-12-02 05:57:50,701 | INFO     | ***************************************
[2025-12-02 06:58:21] 2025-12-02 05:57:50,701 | INFO     | 
[2025-12-02 06:58:21] 2025-12-02 05:57:50,702 | INFO     | architecture information:
[2025-12-02 06:58:21] 2025-12-02 05:57:50,702 | INFO     | executing command: cat /etc/os-release
[2025-12-02 06:58:21] 2025-12-02 05:57:50,715 | INFO     | cat /etc/os-release:
[2025-12-02 06:58:21] NAME="CentOS Linux"
[2025-12-02 06:58:21] VERSION="7 (Core)"
[2025-12-02 06:58:21] ID="centos"
[2025-12-02 06:58:21] ID_LIKE="rhel fedora"
[2025-12-02 06:58:21] VERSION_ID="7"
[2025-12-02 06:58:21] PRETTY_NAME="CentOS Linux 7 (Core)"
[2025-12-02 06:58:21] ANSI_COLOR="0;31"
[2025-12-02 06:58:21] CPE_NAME="cpe:/o:centos:centos:7"
[2025-12-02 06:58:21] HOME_URL="https://www.centos.org/"
[2025-12-02 06:58:21] BUG_REPORT_URL="https://bugs.centos.org/"
[2025-12-02 06:58:21] 
[2025-12-02 06:58:21] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2025-12-02 06:58:21] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2025-12-02 06:58:21] REDHAT_SUPPORT_PRODUCT="centos"
[2025-12-02 06:58:21] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2025-12-02 06:58:21] 
[2025-12-02 06:58:21] 2025-12-02 05:57:50,716 | INFO     | ***************************************
[2025-12-02 06:58:21] 2025-12-02 05:57:51,219 | INFO     | executing command: df -mP /local/data/boinc/slots/0
[2025-12-02 06:58:21] 2025-12-02 05:57:51,235 | INFO     | sufficient remaining disk space (322228453376 B)
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | INFO     | current server update state: UPDATING_FINAL
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | INFO     | update_server=False
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2025-12-02 06:58:21] 2025-12-02 05:57:51,236 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2025-12-02 06:58:21] 2025-12-02 05:57:51,237 | INFO     | aborting loop
[2025-12-02 06:58:21] 2025-12-02 05:57:51,320 | INFO     | all data control threads have been joined
[2025-12-02 06:58:21] 2025-12-02 05:57:52,133 | INFO     | all job control threads have been joined
[2025-12-02 06:58:21] 2025-12-02 05:57:52,241 | INFO     | [job] retrieve thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,241 | INFO     | [job] queue monitor thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,242 | INFO     | [job] job monitor thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,326 | INFO     | [data] control thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,334 | INFO     | all payload control threads have been joined
[2025-12-02 06:58:21] 2025-12-02 05:57:52,399 | INFO     | [job] create_data_payload thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,944 | INFO     | [payload] validate_pre thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:52,950 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2025-12-02 06:58:21] 2025-12-02 05:57:52,997 | INFO     | [payload] validate_post thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,082 | INFO     | [payload] execute_payloads thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,139 | INFO     | [job] control thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,205 | INFO     | [job] validate thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,242 | INFO     | [data] copytool_out thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,339 | INFO     | [payload] control thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,591 | INFO     | [payload] failed_post thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:53,614 | INFO     | [data] copytool_in thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:57:56,957 | INFO     | [data] queue_monitor thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:58:01,373 | INFO     | job.realtimelogging is not enabled
[2025-12-02 06:58:21] 2025-12-02 05:58:02,377 | INFO     | [payload] run_realtimelog thread has finished
[2025-12-02 06:58:21] 2025-12-02 05:58:10,813 | INFO     | [monitor] cgroup control has ended
[2025-12-02 06:58:21] 2025-12-02 05:58:12,409 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139830033368896)>', '<ExcThread(monitor, started 139829530568448)>']
[2025-12-02 06:58:21] 2025-12-02 05:58:17,435 | INFO     | all workflow threads have been joined
[2025-12-02 06:58:21] 2025-12-02 05:58:17,435 | INFO     | end of generic workflow (traces error code: 0)
[2025-12-02 06:58:21] 2025-12-02 05:58:17,435 | INFO     | traces error code: 0
[2025-12-02 06:58:21] 2025-12-02 05:58:17,435 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | INFO     | PID=877323 has CPU usage=0.8% CMD=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase/x86_64/python/3.9.20-x86_64-centos7/bin/python3 pilot3/pilot.py -q BOINC_MCORE -i PR
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | INFO     | found 0 job(s) in 20 queues
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2025-12-02 06:58:21] 2025-12-02 05:58:21,736 | INFO     | [monitor] control thread has ended
[2025-12-02 06:58:21] 2025-12-02 05:58:21,812 [wrapper] ==== pilot stdout END ====
[2025-12-02 06:58:21] 2025-12-02 05:58:21,816 [wrapper] ==== wrapper stdout RESUME ====
[2025-12-02 06:58:21] 2025-12-02 05:58:21,820 [wrapper] pilotpid: 877323
[2025-12-02 06:58:21] 2025-12-02 05:58:21,824 [wrapper] Pilot exit status: 0
[2025-12-02 06:58:21] 2025-12-02 05:58:21,836 [wrapper] pandaids: 6897309776
[2025-12-02 06:58:21] 2025-12-02 05:58:21,856 [wrapper] cleanup supervisor_pilot  925047 877324
[2025-12-02 06:58:21] 2025-12-02 05:58:21,860 [wrapper] Test setup, not cleaning
[2025-12-02 06:58:21] 2025-12-02 05:58:21,864 [wrapper] apfmon messages muted
[2025-12-02 06:58:21] 2025-12-02 05:58:21,867 [wrapper] ==== wrapper stdout END ====
[2025-12-02 06:58:21] 2025-12-02 05:58:21,871 [wrapper] ==== wrapper stderr END ====
[2025-12-02 06:58:21]  *** Error codes and diagnostics ***
[2025-12-02 06:58:21]     "exeErrorCode": 0,
[2025-12-02 06:58:21]     "exeErrorDiag": "",
[2025-12-02 06:58:21]     "pilotErrorCode": 0,
[2025-12-02 06:58:21]     "pilotErrorDiag": "",
[2025-12-02 06:58:21]  *** Listing of results directory ***
[2025-12-02 06:58:21] total 1079728
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc    576529 Nov 28 11:28 pilot3.tar.gz
[2025-12-02 06:58:21] -rwx------ 1 boinc boinc     36292 Nov 28 11:31 runpilot2-wrapper.sh
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc      5112 Nov 28 11:33 queuedata.json
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc       100 Dec  2 01:01 wrapper_26015_x86_64-pc-linux-gnu
[2025-12-02 06:58:21] -rwxr-xr-x 1 boinc boinc      7986 Dec  2 01:01 run_atlas
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc       105 Dec  2 01:01 job.xml
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc 377150614 Dec  2 01:01 EVNT.47531050._000477.pool.root.1
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc    590117 Dec  2 01:01 input.tar.gz
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc     15847 Dec  2 01:01 start_atlas.sh
[2025-12-02 06:58:21] drwxrwx--x 2 boinc boinc      4096 Dec  2 01:01 shared
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc         0 Dec  2 01:01 boinc_setup_complete
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc      6381 Dec  2 01:01 init_data.xml
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc         0 Dec  2 01:01 boinc_lockfile
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc      2878 Dec  2 01:01 pandaJob.out
[2025-12-02 06:58:21] -rw------- 1 boinc boinc    992016 Dec  2 01:01 agis_schedconf.cvmfs.json
[2025-12-02 06:58:21] drwx------ 5 boinc boinc      4096 Dec  2 01:01 pilot3
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc       531 Dec  2 06:54 boinc_task_state.xml
[2025-12-02 06:58:21] -rw------- 1 boinc boinc 715891911 Dec  2 06:57 HITS.47531058._000926.pool.root.1
[2025-12-02 06:58:21] -rw------- 1 boinc boinc        95 Dec  2 06:57 pilot_heartbeat.json
[2025-12-02 06:58:21] -rw------- 1 boinc boinc      1030 Dec  2 06:57 memory_monitor_summary.json
[2025-12-02 06:58:21] -rw------- 1 boinc boinc   1516240 Dec  2 06:57 agis_ddmendpoints.agis.ALL.json
[2025-12-02 06:58:21] -rw------- 1 boinc boinc   1304333 Dec  2 06:57 log.47531058._000926.job.log.tgz.1
[2025-12-02 06:58:21] -rw------- 1 boinc boinc     27516 Dec  2 06:57 heartbeat.json
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc        28 Dec  2 06:58 wrapper_checkpoint.txt
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc      8192 Dec  2 06:58 boinc_mmap_file
[2025-12-02 06:58:21] -rw------- 1 boinc boinc       746 Dec  2 06:58 pilotlog.txt
[2025-12-02 06:58:21] -rw------- 1 boinc boinc   3019096 Dec  2 06:58 log.47531058._000926.job.log.1
[2025-12-02 06:58:21] -rw------- 1 boinc boinc       353 Dec  2 06:58 output.list
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc       620 Dec  2 06:58 runtime_log
[2025-12-02 06:58:21] -rw------- 1 boinc boinc   4362240 Dec  2 06:58 result.tar.gz
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc      8918 Dec  2 06:58 runtime_log.err
[2025-12-02 06:58:21] -rw------- 1 boinc boinc       669 Dec  2 06:58 FFSKDmKwAj8nsSi4ap6QjLDmwznN0nGgGQJmNLGKDmlcOKDmlTsyKo.diag
[2025-12-02 06:58:21] -rw-r--r-- 1 boinc boinc     21010 Dec  2 06:58 stderr.txt
[2025-12-02 06:58:21] HITS file was successfully produced:
[2025-12-02 06:58:21] -rw------- 1 boinc boinc 715891911 Dec  2 06:57 shared/HITS.pool.root.1
[2025-12-02 06:58:21]  *** Contents of shared directory: ***
[2025-12-02 06:58:21] total 1072292
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc 377150614 Dec  2 01:01 ATLAS.root_0
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc    590117 Dec  2 01:01 input.tar.gz
[2025-12-02 06:58:21] -rw-r--r-- 2 boinc boinc     15847 Dec  2 01:01 start_atlas.sh
[2025-12-02 06:58:21] -rw------- 1 boinc boinc 715891911 Dec  2 06:57 HITS.pool.root.1
[2025-12-02 06:58:21] -rw------- 1 boinc boinc   4362240 Dec  2 06:58 result.tar.gz
06:58:23 (873543): run_atlas exited; CPU time 83373.213797
06:58:23 (873543): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN